Revision 4621
Added by Aaron Marcuse-Kubitza almost 12 years ago
| test.xml.ref | ||
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| 1 | 1 |
Put template: |
| 2 | 2 |
<VegBIEN> |
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<location id="-1">
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<authorlocationcode>$museumaccessionnumber</authorlocationcode>
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<locationevent>
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<sourceaccessioncode>$observation_id</sourceaccessioncode>
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<taxonoccurrence>
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<aggregateoccurrence>
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<collectiondate><_date><date>$collectiondate</date></_date></collectiondate>
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<notes>$notes</notes>
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<plantobservation><specimenreplicate><catalognumber_dwc>$museumaccessionnumber</catalognumber_dwc></specimenreplicate></plantobservation>
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</aggregateoccurrence>
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<authortaxoncode>$authorplantname</authortaxoncode>
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<sourceaccessioncode>$taxonobservation_id</sourceaccessioncode>
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<taxondetermination>
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<plantconcept_id>
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<plantconcept>
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<plantname_id>
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<_simplifyPath>
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<next>parent_id</next>
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<path>
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<plantname>
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<rank>binomial</rank>
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<parent_id>
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<_simplifyPath id="-1">
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<next>parent_id</next>
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<path>
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<location>
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<authorlocationcode>$museumaccessionnumber</authorlocationcode>
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<locationevent>
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<sourceaccessioncode>$observation_id</sourceaccessioncode>
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<taxonoccurrence>
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<aggregateoccurrence>
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<collectiondate><_date><date>$collectiondate</date></_date></collectiondate>
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<notes>$notes</notes>
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<plantobservation><specimenreplicate><catalognumber_dwc>$museumaccessionnumber</catalognumber_dwc></specimenreplicate></plantobservation>
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</aggregateoccurrence>
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<authortaxoncode>$authorplantname</authortaxoncode>
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<sourceaccessioncode>$taxonobservation_id</sourceaccessioncode>
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<taxondetermination>
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<plantconcept_id>
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<plantconcept>
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<plantname_id>
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<_simplifyPath>
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<next>parent_id</next>
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<path>
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| 25 | 25 |
<plantname> |
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<rank>authority</rank>
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<rank>binomial</rank>
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| 27 | 27 |
<parent_id> |
| 28 | 28 |
<plantname> |
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<rank>subspecies</rank> |
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<plantname>$Subspecies</plantname> |
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<rank>authority</rank> |
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| 31 | 30 |
<parent_id> |
| 32 | 31 |
<plantname> |
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<rank>species</rank> |
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<plantname>$Species</plantname> |
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<rank>subspecies</rank>
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<plantname>$Subspecies</plantname>
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| 35 | 34 |
<parent_id> |
| 36 | 35 |
<plantname> |
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<rank>genus</rank>
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<plantname>$Genus</plantname>
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<rank>species</rank>
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<plantname>$Species</plantname>
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| 39 | 38 |
<parent_id> |
| 40 | 39 |
<plantname> |
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<rank>family</rank>
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<plantname>$Family</plantname>
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<rank>genus</rank>
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<plantname>$Genus</plantname>
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| 43 | 42 |
<parent_id> |
| 44 | 43 |
<plantname> |
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<rank>order</rank>
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<plantname>$Order</plantname>
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<rank>family</rank>
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<plantname>$Family</plantname>
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| 47 | 46 |
<parent_id> |
| 48 | 47 |
<plantname> |
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<rank>class</rank>
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<plantname>$Class</plantname>
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<rank>order</rank>
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<plantname>$Order</plantname>
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| 51 | 50 |
<parent_id> |
| 52 | 51 |
<plantname> |
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<rank>subkingdom</rank> |
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<rank>class</rank> |
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<plantname>$Class</plantname> |
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| 54 | 54 |
<parent_id> |
| 55 | 55 |
<plantname> |
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<rank>kingdom</rank> |
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<plantname>$Kingdom</plantname> |
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<rank>subkingdom</rank> |
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<parent_id> |
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<plantname> |
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<rank>kingdom</rank> |
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<plantname>$Kingdom</plantname> |
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</plantname> |
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</parent_id> |
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| 58 | 63 |
</plantname> |
| 59 | 64 |
</parent_id> |
| 60 | 65 |
</plantname> |
| ... | ... | |
| 72 | 77 |
</plantname> |
| 73 | 78 |
</parent_id> |
| 74 | 79 |
</plantname> |
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</parent_id>
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</plantname>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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<determinationdate><_date><date><_dateRangeStart><value>$interpretationdate</value></_dateRangeStart></date></_date></determinationdate>
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<taxonfit>$taxonfit</taxonfit>
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</taxondetermination>
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<taxondetermination>
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<isoriginal>true</isoriginal>
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<plantconcept_id>
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<plantconcept>
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<plantname_id>
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<_simplifyPath>
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<next>parent_id</next>
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<path>
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<plantname>
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<rank>binomial</rank>
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<plantname>$authorplantname</plantname>
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</plantname>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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</taxondetermination>
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</taxonoccurrence>
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</locationevent>
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</location>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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<determinationdate><_date><date><_dateRangeStart><value>$interpretationdate</value></_dateRangeStart></date></_date></determinationdate>
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<taxonfit>$taxonfit</taxonfit>
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</taxondetermination>
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<taxondetermination>
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<isoriginal>true</isoriginal>
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<plantconcept_id>
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<plantconcept>
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<plantname_id>
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<_simplifyPath>
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<next>parent_id</next>
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<path>
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<plantname>
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<rank>binomial</rank>
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<plantname>$authorplantname</plantname>
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</plantname>
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</path>
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</_simplifyPath>
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</plantname_id>
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</plantconcept>
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</plantconcept_id>
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</taxondetermination>
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</taxonoccurrence>
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</locationevent>
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</location>
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</path>
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</_simplifyPath>
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| 106 | 111 |
</VegBIEN> |
| 107 | 112 |
Inserted 19 new rows into database |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Added /_simplifyPath:[next=parent_id]/path to root so the returned subplot location will be its parent location if there is no subplot name or ID (indicating that that particular plot did not have subplots). Note that this also causes the parent_id forwarding effect to occur for all other tables containing parent_id, which will help prevent similar issues with subplot events, etc. This will hopefully fix the SALVIAS.plotObservations bug where some organisms did not have a subplot #, causing the subplot location to become NULL and causing the corresponding locationevent rows not to match the locationevent_unique_within_location index filter condition (which requires a parent_id), which caused multiple output table pkeys to be returned for those rows, violating the locationevent_pkeys temp table's primary key.