|
1
|
ARIZ[Veg+],VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
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2
|
globalUniqueIdentifier,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
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3
|
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
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4
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collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
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5
|
CatalogNumberNumeric,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else/_alt/1",
|
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6
|
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else/_alt/2",Don't overwrite CatalogNumberNumeric
|
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7
|
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
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8
|
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
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9
|
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
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10
|
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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11
|
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
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12
|
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
13
|
coordinateUncertaintyInMeters,/location/locationdetermination/coordsaccuracy/_noCV/value/_alt/1,
|
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14
|
boundingBox,/location/locationdetermination/footprintgeometry_dwc,
|
|
15
|
decimalLatitude,"/location/locationdetermination/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
|
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16
|
verbatimLatitude,"/location/locationdetermination/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
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17
|
decimalLongitude,"/location/locationdetermination/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
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18
|
verbatimLongitude,"/location/locationdetermination/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
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19
|
county,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=county]/placename",
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20
|
stateProvince,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=stateProvince]/placename",
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21
|
country,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=country]/placename",
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22
|
continentOcean,"/location/locationdetermination/namedplace_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[county,stateProvince,country,],do=""namedplace[rank=_val]/parent_id""]/namedplace[rank=continent]/placename",
|
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23
|
VerbatimCollectingDate,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date/_alt/0,
|
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24
|
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
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25
|
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
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26
|
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
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27
|
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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28
|
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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|
29
|
collectorNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
|
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30
|
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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31
|
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else/_alt/1",
|
|
32
|
CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else/_alt/2",Don't overwrite CatalogNumberNumeric
|
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33
|
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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34
|
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
|
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35
|
globalUniqueIdentifier,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
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36
|
collectorNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
|
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37
|
ScientificNameAuthor,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/2/_alt/1,Contains the binomial in addition to the authority
|
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38
|
ScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/2/_alt/2,
|
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39
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
|
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40
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
|
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41
|
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
|
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42
|
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_alt/1",Contains the binomial in addition to the authority
|
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43
|
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[],do=""plantname[rank=_val]/parent_id""]/plantname[rank=binomial]/plantname/_alt/2",
|
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44
|
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subspecies]/plantname/_name/last",
|
|
45
|
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=species]/plantname",
|
|
46
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=genus]/plantname",
|
|
47
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=family]/plantname",
|
|
48
|
order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=order]/plantname",
|
|
49
|
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=class]/plantname",
|
|
50
|
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=subkingdom]/plantname",
|
|
51
|
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/plantconcept/plantname_id/_simplifyPath:[next=parent_id]/path/_forEach:[in:[binomial,authority,subspecies,species,genus,family,order,class,subkingdom,],do=""plantname[rank=_val]/parent_id""]/plantname[rank=kingdom]/plantname",
|
|
52
|
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
53
|
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
54
|
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
55
|
remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
|
|
56
|
IdentificationModifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
|
|
57
|
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
|
|
58
|
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1",
|
|
59
|
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2",Don't overwrite CatalogNumberNumeric
|
|
60
|
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
61
|
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
62
|
locality,/location/locationnarrative/_merge/1,
|
|
63
|
AgeClass,,** No join mapping for lifeStage **
|
|
64
|
FieldNumber,,"** No join mapping for OMIT ** Usage inconsistent with DwC definition: meaning is recordNumber. Identical to CollectorNumber [1], so does not need to be mapped.
|
|
65
|
|
|
66
|
[1] The following query returns no rows: SELECT * FROM ""ARIZ"".""Specimen"" WHERE ""CollectorNumber"" IS DISTINCT FROM ""FieldNumber"""
|
|
67
|
GenBankNum,,"** No join mapping for associatedSequences/_label[label=""GenBank""]/value ** "
|
|
68
|
GeorefMethod,,** No join mapping for georeferenceProtocol **
|
|
69
|
LatLongComments,,** No join mapping for georeferenceRemarks **
|
|
70
|
OriginalCoordinateSystem,,** No join mapping for verbatimSRS **
|
|
71
|
OtherCatalogNumbers,,** No join mapping for RelatedCatalogItem/_alt/1 **
|
|
72
|
RelatedCatalogedItems,,** No join mapping for RelatedCatalogItem/_alt/2 ** Used only when OtherCatalogNumbers is NULL
|
|
73
|
TimeCollected,,** No join mapping for eventTime **
|
