plot_id,locationID,

authorplotcode,plotName,

reference_id,reference_id,

parent_id,parentPlotID,

locationaccuracy,coordinateUncertaintyInMeters,

confidentialitystatus,confidentialitystatus,

confidentialityreason,confidentialityreason,

latitude,verbatimLatitude,

longitude,verbatimLongitude,

authordatum,authordatum,

authorlocation,authorlocation,

locationnarrative,locality,

shape,footprintWKT,

area,plotArea,

standsize,standsize,

placementmethod,placementmethod,

permanence,permanence,

layoutnarrative,layoutnarrative,

elevation,verbatimElevation,

slopeaspect,slopeAspect,

minslopeaspect,minSlopeAspect,

slopegradient,slopeGradient,

minslopegradient,minSlopeGradient,

topoposition,topoposition,

landform,landform,

surficialdeposits,surficialdeposits,

rocktype,rocktype,

stateprovince,stateProvince,

country,country,

submitter_surname,submitter_surname,

submitter_givenname,submitter_givenname,

submitter_email,submitter_email,

notespublic,notespublic,

revisions,revisions,

dateentered,dateentered,

emb_plot,emb_plot,

accessioncode,accessioncode,

continent,continent,

area|country|territory,country,

region|state|province,stateProvince,

county,county,

Geographic Name,Geographic Name,

GlobalUniqueIdentifier,occurrenceID,

DateLastModified,dcterms:modified,

InstitutionCode,institutionCode,

CollectionCode,collectionCode,

CatalogNumber,CatalogNumber/_alt/2,Don't overwrite CatalogNumberNumeric

Collector,recordedBy,

CollectorNumber,recordNumber,

YearCollected,yearCollected,

MonthCollected,monthCollected,

DayCollected,dayCollected,

TimeCollected,eventTime,

VerbatimCollectingDate,dateCollected/_alt/0,

FieldNotes,fieldNotes,

JulianDay,day,

HigherGeography,HigherGeography,

IslandGroup,IslandGroup,

Island,Island,

StateProvince,stateProvince,

Locality,locality,

HorizontalDatum,HorizontalDatum,Not used

OriginalCoordinateSystem,verbatimSRS,

VerbatimLatitude,verbatimLatitude,

VerbatimLongitude,verbatimLongitude,

CoordinateUncertaintyInMeters,coordinateUncertaintyInMeters,

BoundingBox,footprintWKT,

MinimumElevationInMeters,minimumElevationInMeters,

VerbatimElevation,verbatimElevation,

MaximumDepthInMeters,maximumDepthInMeters,

VerbatimDepth,VerbatimDepth,

ScientificName,ScientificName/_alt/2,

Kingdom,kingdom,

Phylum,phylum,

Class,class,

Order,order,

Family,family,

Genus,genus,

Species,specificEpithet,

Subspecies,infraspecificEpithet,

ScientificNameAuthor,ScientificName/_alt/1,Contains the binomial in addition to the authority

IdentifiedBy,identifiedBy,

IdentificationModifier,identificationQualifier,

YearIdentified,yearIdentified,

DayIdentified,dayIdentified,

TypeStatus,TypeStatus,

Preparations,Preparations,

Tissues,Tissues,Not used

IndividualCount,individualCount,

AgeClass,lifeStage,

GenBankNum,"associatedSequences/_label[label=""GenBank""]/value",

OtherCatalogNumbers,RelatedCatalogItem/_alt/1,

RelatedCatalogedItems,RelatedCatalogItem/_alt/2,Used only when OtherCatalogNumbers is NULL

Accession Number,occurrenceID,

SeriesName,collectionCode,

Full Taxon Name,scientificName,

Collect Date,dateCollected,

State,stateProvince,

Elevation,verbatimElevation,

Lat (-=S),"Latitude/_replace:[""\?$""=]/value",

Long (-=W),"Longitude/_replace:[""\?$""=]/value",

Accuracy,coordinateUncertaintyInMeters,

FIPS,FIPS,FIPS county code

Alt N/S,Alt N/S,

Alt E/W,Alt E/W,

,,

dwc_dwcore_GlobalUniqueIdentifier,occurrenceID,

dwc_dwcore_DateLastModified,dcterms:modified,

dwc_dwcore_InstitutionCode,institutionCode,

dwc_dwcore_CollectionCode,collectionCode,

dwc_dwcore_CatalogNumber,catalogNumber,

dwc_dwcore_Remarks,taxonRemarks,

dwc_dwcore_ScientificName,scientificName,

dwc_dwcore_Kingdom,kingdom,

dwc_dwcore_Phylum,phylum,

dwc_dwcore_Class,class,

dwc_dwcore_Order,order,

dwc_dwcore_Family,family,

dwc_dwcore_Genus,genus,

dwc_dwcore_SpecificEpithet,specificEpithet,

dwc_dwcore_InfraspecificEpithet,infraspecificEpithet,

dwc_dwcore_AuthorYearOfScientificName,ScientificNameAuthor/_alt/3,

dwc_dwcore_Continent,continent,

dwc_dwcore_Country,country,

dwc_dwcore_StateProvince,stateProvince,

dwc_dwcore_County,county,

dwc_dwcore_Locality,locality,

dwc_dwcore_MinimumElevationInMeters,minimumElevationInMeters,

dwc_dwcore_MaximumElevationInMeters,maximumElevationInMeters,

dwc_dwcore_MinimumDepthInMeters,minimumDepthInMeters,

dwc_dwcore_MaximumDepthInMeters,maximumDepthInMeters,

dwc_dwcore_Collector,recordedBy,

dwc_dwcore_Sex,sex,

dwc_curatorial_IdentifiedBy,identifiedBy,

dwc_curatorial_CollectorNumber,recordNumber/_alt/3,

dwc_curatorial_FieldNumber,recordNumber/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)

-----

SELECT count(*) FROM ""SpeciesLink"".specimens

WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber""

-----"

dwc_curatorial_IndividualCount,individualCount,

dwc_geospatial_DecimalLatitude,decimalLatitude,

dwc_geospatial_DecimalLongitude,decimalLongitude,

dwc_geospatial_VerbatimLatitude,verbatimLatitude,

dwc_geospatial_VerbatimLongitude,verbatimLongitude,

http__purl_org_dc_terms_modified,dcterms:modified,

dwc_terms_collectionID,collectionID,

dwc_terms_institutionCode,institutionCode,

dwc_terms_collectionCode,collectionCode,

dwc_terms_identifiedBy,identifiedBy,

dwc_terms_dateIdentified,dateIdentified,

dwc_terms_typeStatus,typeStatus,

dwc_terms_occurrenceRemarks,occurrenceRemarks,

dwc_terms_recordNumber,recordNumber/_alt/1,

dwc_terms_recordedBy,recordedBy,

dwc_terms_individualCount,individualCount,

dwc_terms_sex,sex,

dwc_terms_preparations,preparations,

dwc_terms_otherCatalogNumbers,otherCatalogNumbers,

dwc_terms_eventTime,eventTime,

dwc_terms_startDayOfYear,startDayOfYear,

dwc_terms_endDayOfYear,endDayOfYear,

dwc_terms_year,year,

dwc_terms_month,month,

dwc_terms_day,day,

dwc_terms_fieldNumber,recordNumber/_alt/2,"Usage inconsistent with DwC definition. This field is instead identical to recordNumber, as the following query returns zero: (takes 23 sec)

-----

SELECT count(*) FROM ""SpeciesLink"".specimens

WHERE COALESCE(""dwc_curatorial_FieldNumber"", ""dwc_terms_fieldNumber"", ""conceptual_darwin_2003_1_0_FieldNumber"") != ""dwc_terms_recordNumber""

-----"

dwc_terms_stateProvince,stateProvince,

dwc_terms_locality,locality,

dwc_terms_minimumElevationInMeters,minimumElevationInMeters,

dwc_terms_maximumElevationInMeters,maximumElevationInMeters,

dwc_terms_minimumDepthInMeters,minimumDepthInMeters,

dwc_terms_maximumDepthInMeters,maximumDepthInMeters,

dwc_terms_verbatimLatitude,verbatimLatitude,

dwc_terms_verbatimLongitude,verbatimLongitude,

dwc_terms_coordinateUncertaintyInMeters,coordinateUncertaintyInMeters,

dwc_terms_scientificName,scientificName,

dwc_terms_kingdom,kingdom,

dwc_terms_phylum,phylum,

dwc_terms_class,class,

dwc_terms_order,order,

dwc_terms_specificEpithet,specificEpithet,

dwc_terms_scientificNameAuthorship,ScientificNameAuthor/_alt/1,

conceptual_darwin_2003_1_0_DateLastModified,dcterms:modified,

conceptual_darwin_2003_1_0_CollectionCode,collectionCode,

conceptual_darwin_2003_1_0_CatalogNumber,catalogNumber,

conceptual_darwin_2003_1_0_ScientificName,scientificName,

conceptual_darwin_2003_1_0_BasisOfRecord,BasisOfRecord,

conceptual_darwin_2003_1_0_Phylum,phylum,

conceptual_darwin_2003_1_0_Class,class,

conceptual_darwin_2003_1_0_Order,order,

conceptual_darwin_2003_1_0_Family,family,

conceptual_darwin_2003_1_0_Genus,genus,

conceptual_darwin_2003_1_0_Species,specificEpithet,

conceptual_darwin_2003_1_0_Subspecies,infraspecificEpithet,

conceptual_darwin_2003_1_0_ScientificNameAuthor,ScientificNameAuthor/_alt/2,

conceptual_darwin_2003_1_0_IdentifiedBy,identifiedBy,

conceptual_darwin_2003_1_0_YearIdentified,yearIdentified,

conceptual_darwin_2003_1_0_DayIdentified,dayIdentified,

conceptual_darwin_2003_1_0_TypeStatus,TypeStatus,

conceptual_darwin_2003_1_0_CollectorNumber,recordNumber/_alt/3,

conceptual_darwin_2003_1_0_YearCollected,yearCollected,

conceptual_darwin_2003_1_0_MonthCollected,monthCollected,

conceptual_darwin_2003_1_0_DayCollected,dayCollected,

conceptual_darwin_2003_1_0_JulianDay,JulianDay/_alt/1,

conceptual_darwin_2003_1_0_TimeOfDay,eventTime,

conceptual_darwin_2003_1_0_ContinentOcean,continent,

conceptual_darwin_2003_1_0_Country,country,

conceptual_darwin_2003_1_0_County,county,

conceptual_darwin_2003_1_0_Locality,locality,

conceptual_darwin_2003_1_0_Longitude,verbatimLongitude,

conceptual_darwin_2003_1_0_CoordinatePrecision,coordinatePrecision,

conceptual_darwin_2003_1_0_BoundingBox,footprintWKT,

conceptual_darwin_2003_1_0_MinimumElevation,minimumElevationInMeters,

conceptual_darwin_2003_1_0_MaximumElevation,maximumElevationInMeters,

conceptual_darwin_2003_1_0_MinimumDepth,minimumDepthInMeters,

conceptual_darwin_2003_1_0_MaximumDepth,maximumDepthInMeters,

conceptual_darwin_2003_1_0_Sex,sex,

conceptual_darwin_2003_1_0_PreparationType,preparations,

conceptual_darwin_2003_1_0_IndividualCount,individualCount,

conceptual_darwin_2003_1_0_PreviousCatalogNumber,otherCatalogNumbers,

conceptual_darwin_2003_1_0_RelationshipType,relationshipOfResource,

conceptual_darwin_2003_1_0_RelatedCatalogItem,relatedResourceID,

conceptual_darwin_2003_1_0_Notes,fieldNotes,

%/map.full.csv: %/map.csv

	$(cp)

observation_id,eventID,

previousobs_id,previousobs_id,

plot_id,locationID,

project_id,projectID,

authorobscode,fieldNumber,

dateaccuracy,dateaccuracy,

covermethod_id,covermethod_id,

coverdispersion,coverdispersion,

stratummethod_id,stratummethod_id,

methodnarrative,samplingProtocol,

taxonobservationarea,taxonobservationarea,

stemsizelimit,stemsizelimit,

stemobservationarea,stemobservationarea,

stemsamplemethod,stemsamplemethod,

originaldata,originaldata,

effortlevel,effortlevel,

plotvalidationlevel,plotvalidationlevel,

floristicquality,floristicquality,

bryophytequality,bryophytequality,

lichenquality,lichenquality,

observationnarrative,observationnarrative,

landscapenarrative,landscapenarrative,

homogeneity,homogeneity,

phenologicaspect,phenologicaspect,

representativeness,representativeness,

standmaturity,standmaturity,

successionalstatus,successionalstatus,

hydrologicregime,hydrologicregime,

soilmoistureregime,soilmoistureregime,

soildrainage,soildrainage,

watersalinity,watersalinity,

waterdepth,waterdepth,

shoredistance,shoredistance,

soildepth,soildepth,

organicdepth,organicdepth,

soiltaxon_id,soiltaxon_id,

soiltaxonsrc,soiltaxonsrc,

percentbedrock,percentbedrock,

percentrockgravel,percentrockgravel,

percentwood,percentwood,

percentlitter,percentlitter,

percentbaresoil,percentbaresoil,

percentwater,percentwater,

percentother,percentother,

nameother,nameother,

treeht,treeht,

shrubht,shrubht,

fieldht,fieldht,

nonvascularht,nonvascularht,

submergedht,submergedht,

treecover,treecover,

shrubcover,shrubcover,

nonvascularcover,nonvascularcover,

submergedcover,submergedcover,

dominantstratum,dominantstratum,

growthform1type,growthform1type,

growthform2type,growthform2type,

growthform3type,growthform3type,

totalcover,totalcover,

notespublic,notespublic,

notesmgt,notesmgt,

revisions,revisions,

obsstartdate,startDate,

obsenddate,endDate,

dateentered,dateentered,

emb_observation,emb_observation,

interp_orig_ci_id,interp_orig_ci_id,

interp_orig_cc_id,interp_orig_cc_id,

interp_orig_sciname,interp_orig_sciname,

interp_orig_code,interp_orig_code,

interp_orig_party_id,interp_orig_party_id,

interp_orig_partyname,interp_orig_partyname,

interp_current_ci_id,interp_current_ci_id,

interp_current_cc_id,interp_current_cc_id,

interp_current_sciname,interp_current_sciname,

interp_current_code,interp_current_code,

interp_current_party_id,interp_current_party_id,

interp_current_partyname,interp_current_partyname,

interp_bestfit_ci_id,interp_bestfit_ci_id,

interp_bestfit_sciname,interp_bestfit_sciname,

toptaxon1name,toptaxon1name,

toptaxon2name,toptaxon2name,

toptaxon3name,toptaxon3name,

toptaxon4name,toptaxon4name,

toptaxon5name,toptaxon5name,

accessioncode,accessioncode,

soilobs_id,soilobs_id,

soilhorizon,soilhorizon,

soildepthtop,soildepthtop,

soildepthbottom,soildepthbottom,

soilcolor,soilcolor,

soiltexture,texture,

soilclay,clay,

soilph,ph,

exchangecapacity,cationExchangeCapacity,

basesaturation,baseSaturation,

emb_soilobs,emb_soilobs,

row_num,row_num,

id,occurrenceID,

establishmentMeans,establishmentMeans,

locality,locality,

language,dcterms:language,

occurrenceRemarks,occurrenceRemarks,

type,dcterms:type,

institutionCode,institutionCode,

rights,dcterms:rights,

family,family,

collectionCode,collectionCode,

basisOfRecord,basisOfRecord,

countryCode,countryCode,

darwin:DateLastModified,dcterms:modified,

darwin:InstitutionCode,institutionCode,

darwin:CollectionCode,collectionCode,

darwin:CatalogNumber,catalogNumber,

darwin:ScientificName,scientificName,

darwin:Kingdom,kingdom,

darwin:Phylum,phylum,

darwin:Order,order,

darwin:Species,specificEpithet,

darwin:Subspecies,infraspecificEpithet,

darwin:ScientificNameAuthor,scientificNameAuthorship,

darwin:YearIdentified,yearIdentified,

darwin:DayIdentified,dayIdentified,

darwin:TypeStatus,TypeStatus,

darwin:YearCollected,yearCollected,

darwin:MonthCollected,monthCollected,

darwin:DayCollected,dayCollected,

darwin:JulianDay,day,

darwin:TimeOfDay,eventTime,

darwin:ContinentOcean,continent,

darwin:Country,country,

darwin:County,county,

darwin:Locality,locality,

darwin:Longitude,verbatimLongitude,

darwin:CoordinatePrecision,coordinatePrecision,

darwin:MinimumElevation,minimumElevationInMeters,

darwin:MaximumElevation,maximumElevationInMeters,

darwin:MinimumDepth,minimumDepthInMeters,

darwin:MaximumDepth,maximumDepthInMeters,

darwin:Sex,sex,

darwin:PreparationType,preparations,

darwin:IndividualCount,individualCount,

darwin:PreviousCatalogNumber,otherCatalogNumbers,

darwin:RelationshipType,relationshipOfResource,

darwin:RelatedCatalogItem,relatedResourceID,

darwin:Notes,fieldNotes,

ID,occurrenceID,

SiteName,projectName,

1haPlotCode,plotName,

SpecificEpithet,specificEpithet,

Collectors,recordedBy,

dbh,diameterBreastHeight,

ConditionCodes,ConditionCodes,

LocationCodes,LocationCodes,

SamplingPeriod,SamplingPeriod,

Comments,Comments,

SamplingUnitName,SamplingUnitName,

Latitude,verbatimLatitude,

Longitude,verbatimLongitude,

Method,samplingProtocol,

Subplot,subplot,

ProtocolVersion,ProtocolVersion,

ResponsibleInstitution,ResponsibleInstitution,

ProtocolLeadScientist,ProtocolLeadScientist,

ProtocolLeadScientistInstitution,ProtocolLeadScientistInstitution,

ID,occurrenceID,

SpecificEpithet,specificEpithet,

dbh,diameterBreastHeight,

dbh_pom,dbh_pom,

dbh_new,dbh_new,

dbh_new_pom,dbh_new_pom,

ConditionCodes,ConditionCodes,

SamplingPeriod,SamplingPeriod,

Comments,Comments,

SamplingUnitName,SamplingUnitName,

Latitude,verbatimLatitude,

Longitude,verbatimLongitude,

X_1haPlot,organismX,

Y_1haPlot,organismY,

SiteName,projectName,

1haPlotCode,plotName,

ProtocolVersion,ProtocolVersion,

ResponsibleInstitution,ResponsibleInstitution,

ProtocolLeadScientist,ProtocolLeadScientist,

ProtocolLeadScientistInstitution,ProtocolLeadScientistInstitution,

key,key,Not used because UniqueNYInternalRecordNumber is a better pkey

DateLastModified,dcterms:modified,

InstitutionCode,institutionCode,

CollectionCode,collectionCode,

CatalogNumber,catalogNumber,

ScientificName,scientificName,

Kingdom,kingdom,

Phylum,phylum,

Class,class,

Order,order,

Family,family,

Genus,genus,

Species,specificEpithet,

Subspecies,infraspecificEpithet,

ScientificNameAuthor,scientificNameAuthorship,

IdentifiedBy,identifiedBy,

YearIdentified,yearIdentified,

MonthIdentified,monthIdentified,

DayIdentified,dayIdentified,

TypeStatus,TypeStatus,

FieldNumber,recordNumber,Usage inconsistent with DwC definition

Collector,recordedBy,

YearCollected,yearCollected,

MonthCollected,monthCollected,

DayCollected,dayCollected,

JulianDay,day,

TimeOfDay,eventTime,

StateProvince,stateProvince,

Locality,Locality/_merge/1,

Longitude,verbatimLongitude,

Latitude,verbatimLatitude,

CoordinatePrecision,coordinatePrecision,

MinimumElevation,MinimumElevation/_nullIf:[null=.]/value,

MaximumDepth,maximumDepthInMeters,

Sex,sex,

PreparationType,preparations,

IndividualCount,individualCount,

RelationshipType,relationshipOfResource,

Notes,Notes/_merge/1,

Habitat,habitat,

PlantFungusDescription,"Notes/_merge/2/_label[label=""plant fungus""]/value",

Substrate,"Locality/_merge/2/_label[label=""substrate""]/value",

Vegetation,"Locality/_merge/3/_label[label=""vegetation""]/value",

UniqueNYInternalRecordNumber,occurrenceID,

Expedition,projectName,

Inventory name,plotName,

Number of inventory (general),Number of inventory (general),

"Type Inventory (C, PP, TP)","Type Inventory (C, PP, TP)",

Inventory code,locationID,

Tag number,tag,

Tree number,recordNumber,

Number of subplot,subplot,

Index collector,recordedBy,

Specimen,catalogNumber,

Similar specimen,Similar specimen,

Expedition specimen,Expedition specimen,

Field family,verbatimFamily,

Field name,verbatimGenus,Often = Genera

Family (revised),family,

Specie+autor,scientificName,

Genera,genus,

Specific epithet,specificEpithet,

Autor (revised),scientificNameAuthorship,

Determined by,identifiedBy,

Qualifier,identificationQualifier,

Common name,Common name,

Circumference,Circumference,

Diameter,diameterBreastHeight,

Bole height,Bole height,trunk height

Habit,verbatimGrowthForm,

Phenology,Phenology,

Crown position,Crown position,

Crown shape,Crown shape,

Basal area,Basal area,"Would be basalDiameter, but need formula to translate"

Plot X,Plot X,

Plot Y,Plot Y,

Observations,fieldNotes,

Expedition number,projectID,Consistent (globally unique) between PPM and PT data

Expedition name,projectName,Consistent (globally unique) between PPM and PT data

Inventory name,plotName,

Inventory code,locationID,

First evaluation,eventDate,

Installed and evaluated by,Installed and evaluated by,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"

Collaborators,Collaborators,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"

Related Epilocs,Related Epilocs,"It appears to be a list of people, some with #s after them. It doesn't seem like the definition of Epiloc at <http://rithm.wikispaces.com/Tropicos.Epiloc>, which relates to individual specimens, not whole plots."

Area,plotArea,

Coordinates,Coordinates,Concatenation of Latitude (DMS) and Longitude (DMS)

Latitude (DMS),verbatimLatitude,

Longitude (DMS),verbatimLongitude,

Altitude,verbatimElevation,

Minimum altitude,minimumElevationInMeters,

Locality,locality,

Locality description,communityName,Often begins with the text in Vegetation type

Direction,slopeAspect/_alt/1,Part files provide either this field or Direction

Vegetation type,communityID,

Slope,slopeGradient,

Soil sample,Soil sample,Always empty

pH acuoso (ISRIC 4–– 1 - 14),ph,

Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),conductivity,

"Carbón Orgánico (WSP S-9,10–%–0.06)",carbon,

"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",sodium,

"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)",calcium,

"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",magnesium,

Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05),acidity,

CIC (ISRIC 11–cmolc/Kg–0.05),cationExchangeCapacity,

Arcilla (DIN 18 123–%–1),clay,

Textural class,texture,

Observaciones,plotNotes,

accession,occurrenceID,

herbarium,institutionCode,

family,family,

genus,genus,

species,specificEpithet,

usdaRank,taxonRank/_alt/1,

infrarank,taxonRank/_alt/2,

infraname,infraspecificEpithet,

SciName,scientificName,

authors,scientificNameAuthorship,

collectno,recordNumber,

collmonth,monthCollected,

collday,dayCollected,

collyear,yearCollected,

state,stateProvince,

campus,"fieldNotes/_merge/5/_label[label=""campus""]/value",

leaves,"reproductiveCondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

flower,"reproductiveCondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

fruit,"reproductiveCondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

root,"reproductiveCondition/_map:[A=*,I=*,M=*]/value","Main values are A, I, and M. What do they mean?"

locality,locality,

habitat,habitat,

sheetno,associatedMedia,?

cultivated,cultivated,Ignore other values

id,occurrenceID,

identifiedBy,identifiedBy,

collectionID,collectionID,

geodeticDatum,geodeticDatum,

reproductiveCondition,reproductiveCondition,

decimalLongitude,decimalLongitude,

institutionCode,institutionCode,

recordedBy,recordedBy,

order,order,

georeferenceSources,georeferenceSources,

language,dcterms:language,

georeferenceVerificationStatus,georeferenceVerificationStatus,

verbatimElevation,verbatimElevation,

locationRemarks,locationRemarks,

verbatimDepth,verbatimDepth,

municipality,municipality,

infraspecificEpithet,infraspecificEpithet,

type,dcterms:type,

specificEpithet,specificEpithet,

identificationRemarks,identificationRemarks,

recordNumber,recordNumber,

rights,dcterms:rights,

occurrenceRemarks,occurrenceRemarks,

habitat,habitat,

stateProvince,stateProvince,

scientificNameAuthorship,scientificNameAuthorship,

scientificName,scientificName,

taxonRank,taxonRank,

phylum,phylum,

locality,locality,

kingdom,kingdom,

decimalLatitude,decimalLatitude,

collectionCode,collectionCode,

bibliographicCitation,dcterms:bibliographicCitation,

catalogNumber,catalogNumber,

country,country,

dynamicProperties,dynamicProperties,

OBSERVATION_ID,individualID,"Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."

PLOT_ID,locationID,

plot_code,plotName,

subplot,subplot,

individual_code,recordNumber,"Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."

ind_id,ind_id,Brad: OMIT

tag1,tag/_alt/1,"Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."

tag2,previousTag/_alt/1,"Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."

x_position,organismX,"Brad: These are important, fundamental values of many tree plots"

y_position,organismY,Brad: See comment above for x_position

voucher_string,catalogNumber/_alt/2,"Brad: OMIT. This is the verbatim text, which includes both collectors name and collection number. I would use coll_number, below."

coll_number,catalogNumber/_alt/1,Brad: Map instead as for voucher_string

collector_code,collector_code,Brad: OMIT

coll_lastname,recordedBy.surName,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."

coll_firstname,recordedBy.givenName,Brad: See comment above

det_type,voucherType,"Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider  asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen."

gen_status,gen_status,Brad: OMIT. This will be determined later by using TNRS.

species_status,species_status,"Brad: OMIT. Except, note that if species_status=3, this indicate that name is a morphospecies and not a standard latin name. Not exactly sure how to use this in BIEN, but could be useful during the name-scrubbing process with TNRS."