VegCore,VegCore

acidity,acidity

authorStemCode,authorStemCode

basalDiameter,basalDiameter

baseSaturation,baseSaturation

calcium,calcium

canopyForm,canopyForm

canopyPosition,canopyPosition

carbon,carbon

catalogNumber,catalogNumber

cationExchangeCapacity,cationExchangeCapacity

censusNumber,censusNumber

class,class

clay,clay

collectionCode,collectionCode

collectionID,collectionID

communityID,communityID

communityName,communityName

conductivity,conductivity

continent,continent

coordinatePrecision,coordinatePrecision

coordinateUncertaintyInMeters,coordinateUncertaintyInMeters

country,country

county,county

coverPercent,coverPercent

cultivated,cultivated

dateCollected,dateCollected

dateIdentified,dateIdentified

dayCollected,dayCollected

dayIdentified,dayIdentified

decimalLatitude,decimalLatitude

decimalLongitude,decimalLongitude

diameterBreastHeight,diameterBreastHeight

diameterBreastHeightGentry,diameterBreastHeightGentry

endDate,endDate

establishmentMeans,establishmentMeans

eventDate,eventDate

eventID,eventID

family,family

fieldNotes,fieldNotes

fieldNumber,fieldNumber

footprintWKT,footprintWKT

genus,genus

growthForm,growthForm

habitat,habitat

height,height

heightFirstBranch,heightFirstBranch

identificationQualifier,identificationQualifier

identifiedBy,identifiedBy

individualCount,individualCount

individualID,individualID

infraspecificEpithet,infraspecificEpithet

institutionCode,institutionCode

kingdom,kingdom

landform,landform

lianaInfestation,lianaInfestation

locality,locality

locationID,locationID

magnesium,magnesium

maxSlopeAspect,maxSlopeAspect

maxSlopeGradient,maxSlopeGradient

maximumDepthInMeters,maximumDepthInMeters

maximumElevationInMeters,maximumElevationInMeters

minSlopeAspect,minSlopeAspect

minSlopeGradient,minSlopeGradient

minimumDepthInMeters,minimumDepthInMeters

minimumElevationInMeters,minimumElevationInMeters

monthCollected,monthCollected

monthIdentified,monthIdentified

nitrogen,nitrogen

occurrenceID,occurrenceID

order,order

organic,organic

organismX,organismX

organismY,organismY

ph,ph

phosphorus,phosphorus

phylum,phylum

plotArea,plotArea

plotName,plotName

plotNotes,plotNotes

potassium,potassium

precipitation,precipitation

previousTag,previousTag

projectID,projectID

projectName,projectName

recordNumber,recordNumber

recordedBy,recordedBy

recordedBy.givenName,recordedBy.givenName

recordedBy.surName,recordedBy.surName

samplingProtocol,samplingProtocol

sand,sand

scientificName,scientificName

scientificNameAuthorship,scientificNameAuthorship

sex,sex

silt,silt

slopeAspect,slopeAspect

slopeGradient,slopeGradient

sodium,sodium

specificEpithet,specificEpithet

startDate,startDate

stateProvince,stateProvince

stemCount,stemCount

stemID,stemID

stemNotes,stemNotes

subplot,subplot

subplotID,subplotID

subplotX,subplotX

subplotY,subplotY

tag,tag

taxonOccurrenceID,taxonOccurrenceID

taxonRank,taxonRank

taxonRemarks,taxonRemarks

temperature,temperature

texture,texture

verbatimClass,verbatimClass

verbatimElevation,verbatimElevation

verbatimFamily,verbatimFamily

verbatimGenus,verbatimGenus

verbatimGrowthForm,verbatimGrowthForm

verbatimIdentificationQualifier,verbatimIdentificationQualifier

verbatimInfraspecificEpithet,verbatimInfraspecificEpithet

verbatimKingdom,verbatimKingdom

verbatimLatitude,verbatimLatitude

verbatimLocality,verbatimLocality

verbatimLongitude,verbatimLongitude

verbatimOrder,verbatimOrder

verbatimPhylum,verbatimPhylum

verbatimScientificName,verbatimScientificName

verbatimScientificNameAuthorship,verbatimScientificNameAuthorship

verbatimSpecificEpithet,verbatimSpecificEpithet

volumeCanopy,volumeCanopy

voucherType,voucherType

yearCollected,yearCollected

yearIdentified,yearIdentified

# Via formats

coreMaps := $(wildcard *-VegBIEN.csv)

filenameVia = $(shell echo '$(1)'|grep --only-matching --extended-regexp\

'^[a-zA-Z+]+')

# can't use --ignore-case because in Mac grep, a bug causes it to break [] exprs

vias := $(strip $(sort $(foreach coreMap,$(coreMaps),$(call\

filenameVia,$(coreMap)))))

join = env header_num=0 $(bin)/join_union_sort

selfMap_ = $(bin)/cols 0 0

mkSelfMap = $(selfMap_) <$<|$(bin)/sort_map >$@

all: _always $(inputCoreMaps) vegcsv_maps self_maps ;

##### Self maps

selfMaps :=

viaCoreMap = $(via)-VegBIEN.csv

viaSelfMap = $(via).self.csv

viaCoreMaps = $(wildcard $(subst %,*,$(viaCoreMap)))

define selfMapTargets

selfMaps += $(viaCoreMaps:$(viaCoreMap)=$(viaSelfMap))

$(viaSelfMap): $(viaCoreMap)

	$$(mkSelfMap)

endef

$(foreach via,$(vias),$(eval $(selfMapTargets)))

ifneq ($(filter self_maps,$(MAKECMDGOALS)),)

self_maps: _always $(selfMaps) ;

else

self_maps: _always

	$(MAKE) self_maps

# re-run make so that cache of existing files for $(viaCoreMaps) is reset

endif

all += $(selfMaps)