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1 4686 aaronmk
VegCore,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
2 4337 aaronmk
subplotID,"/location/_if[@name=""if subplot""]/cond/_exists/_first/1",
3
subplot,"/location/_if[@name=""if subplot""]/cond/_exists/_first/2",
4 4336 aaronmk
plotName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
5
locationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
6
fieldNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/else",
7
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
8
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
9
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
10
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2",
11
voucherType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
12
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else",
13 4324 aaronmk
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16 4082 aaronmk
plotArea,/location/area,
17 4333 aaronmk
subplot,/location/authorlocationcode,
18 3996 aaronmk
verbatimElevation,"/location/elevation/_alt/1/_replace:[""\bca\.?""=]/value",
19 3984 aaronmk
maximumElevationInMeters,"/location/elevation/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
20 3969 aaronmk
minimumElevationInMeters,"/location/elevation/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
21
minimumElevationInMeters,"/location/elevationrange/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
22 3984 aaronmk
maximumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
23 3969 aaronmk
minimumElevationInMeters,"/location/elevationrange/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
24 4082 aaronmk
landform,/location/landform,
25 4726 aaronmk
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy/_noCV/value/_alt/1,
26
coordinatePrecision,/location/locationcoords/coordsaccuracy/_noCV/value/_alt/2,
27
footprintWKT,/location/locationcoords/footprintgeometry_dwc,
28
decimalLatitude,"/location/locationcoords/latitude/_alt/1/_nullIf:[null=0,type=float]/value",
29
verbatimLatitude,"/location/locationcoords/latitude/_alt/2/_nullIf:[null=0,type=float]/value",
30
decimalLongitude,"/location/locationcoords/longitude/_alt/1/_nullIf:[null=0,type=float]/value",
31
verbatimLongitude,"/location/locationcoords/longitude/_alt/2/_nullIf:[null=0,type=float]/value",
32 3996 aaronmk
samplingProtocol,/location/locationevent/*_id/method/name,
33 4082 aaronmk
projectName,/location/locationevent/*_id/project/projectname,
34
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
35 4340 aaronmk
subplotID,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/1",
36
subplot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/2",
37
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
38
eventID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
39 4458 aaronmk
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/1",
40
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/2",
41
plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",
42
locationID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode",
43
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode",
44
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode",
45 4082 aaronmk
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
46
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
47 4563 aaronmk
endDate,/location/locationevent/obsenddate/_*/date/_alt/1,
48
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value,
49
startDate,/location/locationevent/obsstartdate/_*/date/_alt/1,
50
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value,
51 4082 aaronmk
precipitation,/location/locationevent/precipitation,
52
acidity,/location/locationevent/soilobs/acidity,
53
baseSaturation,/location/locationevent/soilobs/basesaturation,
54
calcium,/location/locationevent/soilobs/calcium,
55
carbon,/location/locationevent/soilobs/carbon,
56
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity,
57
clay,/location/locationevent/soilobs/clay,
58
conductivity,/location/locationevent/soilobs/conductivity,
59
magnesium,/location/locationevent/soilobs/magnesium,
60
nitrogen,/location/locationevent/soilobs/nitrogen,
61
organic,/location/locationevent/soilobs/organic,
62
ph,/location/locationevent/soilobs/ph,
63
phosphorus,/location/locationevent/soilobs/phosphorus,
64
potassium,/location/locationevent/soilobs/potassium,
65
sand,/location/locationevent/soilobs/sand,
66
silt,/location/locationevent/soilobs/silt,
67
sodium,/location/locationevent/soilobs/sodium,
68
texture,/location/locationevent/soilobs/texture,
69 4566 aaronmk
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date,
70
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
71
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
72
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
73 3982 aaronmk
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
74 4082 aaronmk
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover,
75
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
76
volumeCanopy,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover,
77 3969 aaronmk
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
78 4076 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
79 3969 aaronmk
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
80 4075 aaronmk
individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
81 4082 aaronmk
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
82 4057 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
83 4327 aaronmk
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
84
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
85 3969 aaronmk
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
86
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
87 4082 aaronmk
stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
88 4364 aaronmk
authorStemCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
89 4082 aaronmk
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter,
90
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
91
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
92
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
93
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
94
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
95
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight,
96
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height,
97
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch,
98 4359 aaronmk
stemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
99 4082 aaronmk
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
100
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
101 4279 aaronmk
organismX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition,
102
organismY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition,
103 4073 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
104 4194 aaronmk
verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/1,
105 4707 aaronmk
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/2,
106
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/3,
107 4082 aaronmk
growthForm,/location/locationevent/taxonoccurrence/growthform,
108 4559 aaronmk
verbatimGrowthForm,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>"
109 4554 aaronmk
cultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1,
110
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
111 3969 aaronmk
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
112 4371 aaronmk
taxonOccurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
113
individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2,
114 4205 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
115
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
116
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
117 4718 aaronmk
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
118
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
119
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
120
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
121
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
122
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
123
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificname,
124
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnameauthor,
125
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnamewithauthor,
126
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
127
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_name/first,
128
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_name/last,
129 4560 aaronmk
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value,
130
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
131
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
132
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
133 4205 aaronmk
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
134
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
135 4718 aaronmk
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
136
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
137
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
138
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
139
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
140
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
141
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificname,
142
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificnameauthor,
143
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
144
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
145 4193 aaronmk
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
146 3969 aaronmk
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
147 4082 aaronmk
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
148
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
149
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
150 4079 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
151 4082 aaronmk
temperature,/location/locationevent/temperature,
152 3984 aaronmk
maximumDepthInMeters,"/location/locationevent/waterdepth/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
153
minimumDepthInMeters,"/location/locationevent/waterdepth/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
154 3969 aaronmk
locality,/location/locationnarrative/_merge/1,
155
verbatimLocality,/location/locationnarrative/_merge/2,
156
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
157 4727 aaronmk
continent,/location/locationplace/*_id/placepath/continent,
158
country,/location/locationplace/*_id/placepath/country,
159
county,/location/locationplace/*_id/placepath/county,
160
stateProvince,/location/locationplace/*_id/placepath/stateprovince,
161 4082 aaronmk
plotNotes,/location/notespublic,
162 4582 aaronmk
slopeAspect,/location/slopeaspect/_alt/1/_compass/value,
163
maxSlopeAspect,/location/slopeaspect/_alt/2/_avg/max,
164
minSlopeAspect,/location/slopeaspect/_alt/2/_avg/min,
165
slopeGradient,/location/slopegradient/_alt/1,
166
maxSlopeGradient,/location/slopegradient/_alt/2/_avg/max,
167
minSlopeGradient,/location/slopegradient/_alt/2/_avg/min,
168 4286 aaronmk
subplotID,/location/sourceaccessioncode,
169 4283 aaronmk
subplotX,/location/sublocationxposition,
170
subplotY,/location/sublocationyposition,