Project

General

Profile

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NY,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
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UniqueNYInternalRecordNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
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InstitutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
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CollectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
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CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else",
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MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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CoordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2,
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BoundingBox,/location/locationcoords/footprintgeometry_dwc,
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Latitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
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Longitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
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DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
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MonthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
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YearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
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IndividualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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Notes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/1,
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PlantFungusDescription,"/location/locationevent/taxonoccurrence/aggregateoccurrence/notes/_join/2/_label[label=""plant fungus""]/value",
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FieldNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,Usage inconsistent with DwC definition
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Sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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CatalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
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CollectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
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UniqueNYInternalRecordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
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FieldNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,Usage inconsistent with DwC definition
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ScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/3,
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IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
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IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
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IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
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Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
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Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
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Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
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Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
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Order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
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Phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
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ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificname,
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ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnameauthor,
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Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
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Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1,
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DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
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MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
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YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
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Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
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MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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Locality,/location/locationnarrative/_merge/1/_join/1,
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Substrate,"/location/locationnarrative/_merge/1/_join/2/_label[label=""substrate""]/value",
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Vegetation,"/location/locationnarrative/_merge/1/_join/3/_label[label=""vegetation""]/value",
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Habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
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ContinentOcean,/location/locationplace/*_id/placepath/continent,
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Country,/location/locationplace/*_id/placepath/country,
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County,/location/locationplace/*_id/placepath/county,
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StateProvince,/location/locationplace/*_id/placepath/stateprovince,
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BasisOfRecord,,** No join mapping for BasisOfRecord ** 
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CollectorNumber,,"** No join mapping for OMIT ** Not used [1], so does not need to be mapped.
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[1] The following query returns no rows: SELECT * FROM ""NY"".""Specimen"" WHERE ""CollectorNumber"" IS NOT NULL"
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DateLastModified,,** No join mapping for dcterms:modified ** 
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JulianDay,,** No join mapping for day ** 
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PreparationType,,** No join mapping for preparations ** 
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PreviousCatalogNumber,,** No join mapping for otherCatalogNumbers ** 
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RelatedCatalogItem,,** No join mapping for relatedResourceID ** 
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RelationshipType,,** No join mapping for relationshipOfResource ** 
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TimeOfDay,,** No join mapping for eventTime ** 
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TypeStatus,,** No join mapping for TypeStatus ** 
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key,,** No join mapping for key ** Not used because UniqueNYInternalRecordNumber is a better pkey
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