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Revision 4768

mappings/VegCore-VegBIEN.csv: Renamed plotAreaHa to plotArea_ha for consistency with VegBIEN units suffixing convention, which includes an "_"

View differences:

inputs/Madidi/Plot/map.csv
9 9
Installed and evaluated by,Installed and evaluated by,,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
10 10
Collaborators,Collaborators,,"Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
11 11
Related Epilocs,Related Epilocs,,"It appears to be a list of people, some with #s after them. It doesn't seem like the definition of Epiloc at <http://rithm.wikispaces.com/Tropicos.Epiloc>, which relates to individual specimens, not whole plots."
12
Area,plotAreaHa,,"""0.1 ha transects"" (""Madidi Transects"" description in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/BIEN2.datasources.xlsx>)"
12
Area,plotArea_ha,,"""0.1 ha transects"" (""Madidi Transects"" description in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/BIEN2.datasources.xlsx>)"
13 13
Number of stems,Number of stems,,Do we want to store this data?
14 14
Number of trees,Number of trees,,Do we want to store this data?
15 15
Coordinates,Coordinates,,Concatenation of Latitude (DMS) and Longitude (DMS)
inputs/SALVIAS-CSV/Plot/map.csv
37 37
life_zone_code,communityName,,
38 38
observation_type,observation_type,,"Brad: SALVIAS internal metadata indicating whether the record represents an individual or aggregate observation. Rather than storing, use to decide where to store in VegX.; Aaron: VegX aggregateOrganismObservation table is missing many fields available in individualOrganismObservation, so we're mapping to individualOrganismObservation regardless of observation type"
39 39
plot_methodology,samplingProtocol,,
40
plot_area_ha,plotAreaHa,,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
40
plot_area_ha,plotArea_ha,,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
41 41
recensused,recensused,,"Brad: This is a 0/1 value, internal to SALVIAS. 1 indicates that a  plot has >1 set of values, from different census events.; Aaron: Different censuses are distinguished in organisms data by different census_no values"
42 42
date_start,startDate,,
43 43
date_finish,endDate,,
inputs/CTFS/Plot/map.csv
8 8
Elevation,verbatimElevation,,
9 9
ReferenceX,ReferenceX,,Rarely used
10 10
ReferenceY,ReferenceY,,Rarely used
11
SizeOfSite,plotAreaHa,,"""Size in hectares"" (SizeOfSite comments in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/CTFS/_src/ctfs-comments_worksheet.xls>)"
11
SizeOfSite,plotArea_ha,,"""Size in hectares"" (SizeOfSite comments in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/CTFS/_src/ctfs-comments_worksheet.xls>)"
12 12
ShapeOfSite,footprintWKT,,
13 13
DescriptionOfSite,locality,,
14 14
CountryName,country,,
inputs/SALVIAS/plotMetadata/map.csv
56 56
life_zone,communityName,,
57 57
PlotMethod,samplingProtocol,,
58 58
MethodCode,MethodCode,,
59
plot_area_ha,plotAreaHa,,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
59
plot_area_ha,plotArea_ha,,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed"
60 60
recensused,recensused,,"Brad: This is a 0/1 value, internal to SALVIAS. 1 indicates that a  plot has >1 set of values, from different census events.; Aaron: Different censuses are distinguished in organisms data by different census_no values"
61 61
date_start,startDate,,
62 62
date_finish,endDate,,
mappings/Veg+.terms.csv
361 361
subplotY,"http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.subplot, http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/plots/plot/relatedPlot/relativeSpatialCoordinate/relativeY","5, ",
362 362
previousTag,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag1,8,Number replaced with named prefix for clarity
363 363
tag,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.tag2,9,Number removed for clarity
364
plotAreaHa,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.plot_area_ha,,
364
plotArea_ha,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.plot_area_ha,,
365 365
precipitation,http://salvias.net/Documents/salvias_data_dictionary.html#Plot+metadata.precip_mm,13,Expanded for clarity
366 366
authorObsCode,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#authorObsCode,4,
367 367
verbatimGrowthForm,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=observation&entity=dba_tabledescription&where=where_tablename#growthform1Type, http://rs.tdwg.org/dwc/terms/#verbatimLocality, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit","62, 69, 28",Additional values from SALVIAS
mappings/VegCore-VegBIEN.csv
14 14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15 15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16 16
plotArea,/location/area_m2,
17
plotAreaHa,/location/area_m2/_ha_to_m2/value,
17
plotArea_ha,/location/area_m2/_ha_to_m2/value,
18 18
subplot,/location/authorlocationcode,
19 19
verbatimElevation,"/location/elevation_m/_alt/1/_replace:[""\bca\.?""=]/value",
20 20
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
mappings/for_review/VegCore-VegBIEN.csv
14 14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15 15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16 16
plotArea,//location/area_m2,
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plotAreaHa,//location/area_m2,
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plotArea_ha,//location/area_m2,
18 18
subplot,//location/authorlocationcode,
19 19
verbatimElevation,//location/elevation_m,
20 20
maximumElevationInMeters,//location/elevation_m,

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