Project

General

Profile

1 4686 aaronmk
VegCore,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
2 4337 aaronmk
subplotID,"/location/_if[@name=""if subplot""]/cond/_exists/_first/1",
3
subplot,"/location/_if[@name=""if subplot""]/cond/_exists/_first/2",
4 4336 aaronmk
plotName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
5
locationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
6
fieldNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/else",
7
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
8
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
9
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
10
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2",
11
voucherType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
12
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else",
13 4324 aaronmk
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16 4770 aaronmk
plotArea_m2,/location/area_m2,
17 4768 aaronmk
plotArea_ha,/location/area_m2/_ha_to_m2/value,
18 4333 aaronmk
subplot,/location/authorlocationcode,
19 4753 aaronmk
verbatimElevation,"/location/elevation_m/_alt/1/_replace:[""\bca\.?""=]/value",
20
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
21
minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
22
minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
23
maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
24
minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
25 4082 aaronmk
landform,/location/landform,
26 4753 aaronmk
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1,
27
coordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2,
28 4726 aaronmk
footprintWKT,/location/locationcoords/footprintgeometry_dwc,
29 4753 aaronmk
decimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
30
verbatimLatitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
31
decimalLongitude,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
32
verbatimLongitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
33 3996 aaronmk
samplingProtocol,/location/locationevent/*_id/method/name,
34 4082 aaronmk
projectName,/location/locationevent/*_id/project/projectname,
35
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
36 4340 aaronmk
subplotID,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/1",
37
subplot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/2",
38
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
39
eventID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
40 4458 aaronmk
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/1",
41
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/2",
42
plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",
43
locationID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode",
44
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode",
45
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode",
46 4082 aaronmk
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
47
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
48 4563 aaronmk
endDate,/location/locationevent/obsenddate/_*/date/_alt/1,
49
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value,
50
startDate,/location/locationevent/obsstartdate/_*/date/_alt/1,
51
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value,
52 4753 aaronmk
precipitation,/location/locationevent/precipitation_m,
53 4754 aaronmk
acidity,/location/locationevent/soilobs/acidity_frac,
54
baseSaturation,/location/locationevent/soilobs/basesaturation_frac,
55
calcium,/location/locationevent/soilobs/calcium_frac,
56
carbon,/location/locationevent/soilobs/carbon_frac,
57
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity_cmol_kg,
58
clay,/location/locationevent/soilobs/clay_frac,
59 4082 aaronmk
conductivity,/location/locationevent/soilobs/conductivity,
60 4754 aaronmk
magnesium,/location/locationevent/soilobs/magnesium_frac,
61
nitrogen,/location/locationevent/soilobs/nitrogen_frac,
62
organic,/location/locationevent/soilobs/organic_frac,
63 4082 aaronmk
ph,/location/locationevent/soilobs/ph,
64 4754 aaronmk
phosphorus,/location/locationevent/soilobs/phosphorus_frac,
65
potassium,/location/locationevent/soilobs/potassium_frac,
66
sand,/location/locationevent/soilobs/sand_frac,
67
silt,/location/locationevent/soilobs/silt_frac,
68
sodium,/location/locationevent/soilobs/sodium_frac,
69 4082 aaronmk
texture,/location/locationevent/soilobs/texture,
70 4566 aaronmk
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date,
71
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
72
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
73
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
74 3982 aaronmk
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
75 4759 aaronmk
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_frac/_pct_to_frac/value,
76 4082 aaronmk
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
77 4781 aaronmk
intercept_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m,
78 4784 aaronmk
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m/_cm_to_m/value,
79 3969 aaronmk
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
80 4076 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
81 3969 aaronmk
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
82 4075 aaronmk
individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
83 4082 aaronmk
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
84 4057 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
85 4327 aaronmk
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
86
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
87 3969 aaronmk
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
88
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
89 4082 aaronmk
stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
90 4364 aaronmk
authorStemCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
91 4753 aaronmk
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter_m,
92 4082 aaronmk
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
93
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
94
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
95
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
96
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
97 4753 aaronmk
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m,
98
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,
99
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch_m,
100 4359 aaronmk
stemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
101 4082 aaronmk
tag,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[""""/iscurrent/_alt/2=true]/tag",Quotes sort it before tag2
102
previousTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/stemtag[iscurrent=true]:[../stemtag?[iscurrent/_alt/2=true]/iscurrent/_alt/1=false]/tag,
103 4753 aaronmk
organismX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition_m,
104
organismY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition_m,
105 4073 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/1,
106 4194 aaronmk
verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/1,
107 4707 aaronmk
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/2,
108
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_alt/2/_alt/3,
109 4082 aaronmk
growthForm,/location/locationevent/taxonoccurrence/growthform,
110 4559 aaronmk
verbatimGrowthForm,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>"
111 4554 aaronmk
cultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1,
112
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
113 3969 aaronmk
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
114 4371 aaronmk
taxonOccurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
115
individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2,
116 4205 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
117
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
118
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
119 4718 aaronmk
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
120 4744 aaronmk
cultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/cultivar,
121 4718 aaronmk
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
122 4744 aaronmk
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/forma,
123 4718 aaronmk
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
124
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
125
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
126
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
127
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificname,
128
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnameauthor,
129
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnamewithauthor,
130
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
131 4749 aaronmk
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1,
132
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/first,
133
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/last,
134 4744 aaronmk
variety,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/variety,
135 4560 aaronmk
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value,
136
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
137
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
138
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
139 4205 aaronmk
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
140
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
141 4718 aaronmk
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
142
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
143
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
144
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
145
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
146
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
147
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificname,
148
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificnameauthor,
149
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
150
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
151 4193 aaronmk
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
152 3969 aaronmk
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
153 4082 aaronmk
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
154
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
155
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
156 4079 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
157 4753 aaronmk
temperature,/location/locationevent/temperature_c,
158
maximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
159
minimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
160 3969 aaronmk
locality,/location/locationnarrative/_merge/1,
161
verbatimLocality,/location/locationnarrative/_merge/2,
162
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
163 4727 aaronmk
continent,/location/locationplace/*_id/placepath/continent,
164
country,/location/locationplace/*_id/placepath/country,
165
county,/location/locationplace/*_id/placepath/county,
166
stateProvince,/location/locationplace/*_id/placepath/stateprovince,
167 4082 aaronmk
plotNotes,/location/notespublic,
168 4753 aaronmk
slopeAspect,/location/slopeaspect_deg/_alt/1/_compass/value,
169
maxSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/max,
170
minSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/min,
171
slopeGradient,/location/slopegradient_frac/_alt/1,
172
maxSlopeGradient,/location/slopegradient_frac/_alt/2/_avg/max,
173
minSlopeGradient,/location/slopegradient_frac/_alt/2/_avg/min,
174 4286 aaronmk
subplotID,/location/sourceaccessioncode,
175 4753 aaronmk
subplotX,/location/sublocationxposition_m,
176
subplotY,/location/sublocationyposition_m,