Revision 4819
Added by Aaron Marcuse-Kubitza over 12 years ago
inputs/XAL/Specimen/VegBIEN.csv | ||
---|---|---|
2 | 2 |
darwin:InstitutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
3 | 3 |
darwin:CollectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
4 | 4 |
darwin:CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
5 |
darwin:MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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6 |
darwin:MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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7 |
darwin:MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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8 |
darwin:MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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9 |
darwin:MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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5 |
darwin:MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
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6 |
darwin:MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
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7 |
darwin:MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
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8 |
darwin:MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
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9 |
darwin:MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
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10 | 10 |
darwin:CoordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2, |
11 | 11 |
darwin:Latitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
12 | 12 |
darwin:Longitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
... | ... | |
40 | 40 |
darwin:YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
41 | 41 |
darwin:Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
42 | 42 |
darwin:CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
43 |
darwin:MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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44 |
darwin:MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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43 |
darwin:MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
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44 |
darwin:MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
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45 | 45 |
darwin:Locality,/location/locationnarrative/_merge/1, |
46 | 46 |
darwin:ContinentOcean,/location/locationplace/*_id/placepath/continent, |
47 | 47 |
darwin:Country,/location/locationplace/*_id/placepath/country, |
inputs/NY/Specimen/VegBIEN.csv | ||
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3 | 3 |
InstitutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
4 | 4 |
CollectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
5 | 5 |
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
6 |
MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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7 |
MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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8 |
MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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9 |
MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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10 |
MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value/_nullIf:[null=.]/value",
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6 |
MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
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7 |
MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_nullIf:[null=.]/value", |
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8 |
MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_nullIf:[null=.]/value", |
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9 |
MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
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10 |
MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_nullIf:[null=.]/value", |
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11 | 11 |
CoordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2, |
12 | 12 |
BoundingBox,/location/locationcoords/footprintgeometry_dwc, |
13 | 13 |
Latitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
... | ... | |
44 | 44 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
45 | 45 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
46 | 46 |
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
47 |
MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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48 |
MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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47 |
MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
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48 |
MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
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49 | 49 |
Locality,/location/locationnarrative/_merge/1/_join/1, |
50 | 50 |
Substrate,"/location/locationnarrative/_merge/1/_join/2/_label[label=""substrate""]/value", |
51 | 51 |
Vegetation,"/location/locationnarrative/_merge/1/_join/3/_label[label=""vegetation""]/value", |
inputs/NY/Specimen/test.xml.ref | ||
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23 | 23 |
<default>m</default> |
24 | 24 |
<to>m</to> |
25 | 25 |
<to></to> |
26 |
<value> |
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27 |
<_replace> |
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28 |
<\bca\.?></\bca\.?> |
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29 |
<value>$MaximumElevation</value> |
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30 |
</_replace> |
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31 |
</value> |
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26 |
<value>$MaximumElevation</value> |
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32 | 27 |
</_units> |
33 | 28 |
</max> |
34 | 29 |
<min> |
... | ... | |
39 | 34 |
<value> |
40 | 35 |
<_rangeStart> |
41 | 36 |
<value> |
42 |
<_replace> |
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43 |
<\bca\.?></\bca\.?> |
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44 |
<value> |
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45 |
<_nullIf> |
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46 |
<null>.</null> |
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47 |
<value>$MinimumElevation</value> |
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48 |
</_nullIf> |
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49 |
</value> |
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50 |
</_replace> |
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37 |
<_nullIf> |
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38 |
<null>.</null> |
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39 |
<value>$MinimumElevation</value> |
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40 |
</_nullIf> |
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51 | 41 |
</value> |
52 | 42 |
</_rangeStart> |
53 | 43 |
</value> |
... | ... | |
65 | 55 |
<value> |
66 | 56 |
<_rangeStart> |
67 | 57 |
<value> |
68 |
<_replace> |
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69 |
<\bca\.?></\bca\.?> |
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70 |
<value> |
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71 |
<_nullIf> |
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72 |
<null>.</null> |
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73 |
<value>$MinimumElevation</value> |
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74 |
</_nullIf> |
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75 |
</value> |
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76 |
</_replace> |
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58 |
<_nullIf> |
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59 |
<null>.</null> |
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60 |
<value>$MinimumElevation</value> |
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61 |
</_nullIf> |
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77 | 62 |
</value> |
78 | 63 |
</_rangeStart> |
79 | 64 |
</value> |
... | ... | |
86 | 71 |
<to></to> |
87 | 72 |
<value> |
88 | 73 |
<_alt> |
89 |
<1> |
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90 |
<_replace> |
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91 |
<\bca\.?></\bca\.?> |
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<value>$MaximumElevation</value> |
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93 |
</_replace> |
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94 |
</1> |
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74 |
<1>$MaximumElevation</1> |
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95 | 75 |
<2> |
96 | 76 |
<_rangeEnd> |
97 | 77 |
<value> |
98 |
<_replace> |
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99 |
<\bca\.?></\bca\.?> |
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100 |
<value> |
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101 |
<_nullIf> |
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102 |
<null>.</null> |
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103 |
<value>$MinimumElevation</value> |
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104 |
</_nullIf> |
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105 |
</value> |
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106 |
</_replace> |
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78 |
<_nullIf> |
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79 |
<null>.</null> |
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80 |
<value>$MinimumElevation</value> |
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81 |
</_nullIf> |
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107 | 82 |
</value> |
108 | 83 |
</_rangeEnd> |
109 | 84 |
</2> |
... | ... | |
253 | 228 |
<default>m</default> |
254 | 229 |
<to>m</to> |
255 | 230 |
<to></to> |
256 |
<value> |
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257 |
<_replace> |
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258 |
<\bca\.?></\bca\.?> |
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259 |
<value>$MaximumDepth</value> |
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260 |
</_replace> |
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261 |
</value> |
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231 |
<value>$MaximumDepth</value> |
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262 | 232 |
</_units> |
263 | 233 |
</max> |
264 | 234 |
<min> |
... | ... | |
266 | 236 |
<default>m</default> |
267 | 237 |
<to>m</to> |
268 | 238 |
<to></to> |
269 |
<value> |
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270 |
<_replace> |
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271 |
<\bca\.?></\bca\.?> |
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272 |
<value>$MinimumDepth</value> |
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273 |
</_replace> |
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274 |
</value> |
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239 |
<value>$MinimumDepth</value> |
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275 | 240 |
</_units> |
276 | 241 |
</min> |
277 | 242 |
</_avg> |
inputs/SALVIAS-CSV/Plot/VegBIEN.csv | ||
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6 | 6 |
PLOT_ID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata." |
7 | 7 |
plot_area_ha,/location/area_m2/_ha_to_m2/value,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed" |
8 | 8 |
elev_m,/location/elevation_m/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick. |
9 |
elev_max_m,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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10 |
elev_min_m,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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11 |
elev_min_m,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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12 |
elev_max_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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13 |
elev_min_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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9 |
elev_max_m,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
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10 |
elev_min_m,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
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11 |
elev_min_m,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
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12 |
elev_max_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
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13 |
elev_min_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
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14 | 14 |
lat_decimal,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
15 | 15 |
long_decimal,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
16 | 16 |
plot_methodology,/location/locationevent/*_id/method/name, |
inputs/SALVIAS-CSV/Plot/test.xml.ref | ||
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17 | 17 |
<default>m</default> |
18 | 18 |
<to>m</to> |
19 | 19 |
<to></to> |
20 |
<value> |
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21 |
<_replace> |
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22 |
<\bca\.?></\bca\.?> |
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23 |
<value>$elev_max_m</value> |
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24 |
</_replace> |
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25 |
</value> |
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20 |
<value>$elev_max_m</value> |
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26 | 21 |
</_units> |
27 | 22 |
</max> |
28 | 23 |
<min> |
... | ... | |
30 | 25 |
<default>m</default> |
31 | 26 |
<to>m</to> |
32 | 27 |
<to></to> |
33 |
<value> |
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34 |
<_rangeStart> |
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35 |
<value> |
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36 |
<_replace> |
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37 |
<\bca\.?></\bca\.?> |
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38 |
<value>$elev_min_m</value> |
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39 |
</_replace> |
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40 |
</value> |
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41 |
</_rangeStart> |
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42 |
</value> |
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28 |
<value><_rangeStart><value>$elev_min_m</value></_rangeStart></value> |
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43 | 29 |
</_units> |
44 | 30 |
</min> |
45 | 31 |
</_avg> |
... | ... | |
53 | 39 |
<default>m</default> |
54 | 40 |
<to>m</to> |
55 | 41 |
<to></to> |
56 |
<value> |
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57 |
<_rangeStart> |
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58 |
<value> |
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59 |
<_replace> |
|
60 |
<\bca\.?></\bca\.?> |
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61 |
<value>$elev_min_m</value> |
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62 |
</_replace> |
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63 |
</value> |
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64 |
</_rangeStart> |
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65 |
</value> |
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42 |
<value><_rangeStart><value>$elev_min_m</value></_rangeStart></value> |
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66 | 43 |
</_units> |
67 | 44 |
</from> |
68 | 45 |
<to> |
... | ... | |
72 | 49 |
<to></to> |
73 | 50 |
<value> |
74 | 51 |
<_alt> |
75 |
<1> |
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76 |
<_replace> |
|
77 |
<\bca\.?></\bca\.?> |
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78 |
<value>$elev_max_m</value> |
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79 |
</_replace> |
|
80 |
</1> |
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81 |
<2> |
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82 |
<_rangeEnd> |
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83 |
<value> |
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84 |
<_replace> |
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85 |
<\bca\.?></\bca\.?> |
|
86 |
<value>$elev_min_m</value> |
|
87 |
</_replace> |
|
88 |
</value> |
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89 |
</_rangeEnd> |
|
90 |
</2> |
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52 |
<1>$elev_max_m</1> |
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53 |
<2><_rangeEnd><value>$elev_min_m</value></_rangeEnd></2> |
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91 | 54 |
</_alt> |
92 | 55 |
</value> |
93 | 56 |
</_units> |
inputs/SALVIAS/plotMetadata/VegBIEN.csv | ||
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6 | 6 |
PlotID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode","Brad: This is artificial internal database ID; a unique identifier within SALVIAS DB to each plot, within the table plotMetadata." |
7 | 7 |
plot_area_ha,/location/area_m2/_ha_to_m2/value,"Brad: Area in hectares. Is there any way to store units?; Aaron: VegX plot area annotation says ""Total area of the plot in square meters."" so units are fixed" |
8 | 8 |
Elev,/location/elevation_m/_alt/1,Brad: Mean elevation in meters. This is a constrained decimal value; is there no place for this in VegX other than verbatimElevation? Check with Nick. |
9 |
elev_max_m,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
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10 |
elev_min_m,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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11 |
elev_min_m,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
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12 |
elev_max_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
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13 |
elev_min_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
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9 |
elev_max_m,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
10 |
elev_min_m,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
11 |
elev_min_m,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
12 |
elev_max_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
13 |
elev_min_m,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
14 | 14 |
LatDec,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
15 | 15 |
LongDec,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
16 | 16 |
PlotMethod,/location/locationevent/*_id/method/name, |
inputs/SALVIAS/plotMetadata/test.xml.ref | ||
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17 | 17 |
<default>m</default> |
18 | 18 |
<to>m</to> |
19 | 19 |
<to></to> |
20 |
<value> |
|
21 |
<_replace> |
|
22 |
<\bca\.?></\bca\.?> |
|
23 |
<value>$elev_max_m</value> |
|
24 |
</_replace> |
|
25 |
</value> |
|
20 |
<value>$elev_max_m</value> |
|
26 | 21 |
</_units> |
27 | 22 |
</max> |
28 | 23 |
<min> |
... | ... | |
30 | 25 |
<default>m</default> |
31 | 26 |
<to>m</to> |
32 | 27 |
<to></to> |
33 |
<value> |
|
34 |
<_rangeStart> |
|
35 |
<value> |
|
36 |
<_replace> |
|
37 |
<\bca\.?></\bca\.?> |
|
38 |
<value>$elev_min_m</value> |
|
39 |
</_replace> |
|
40 |
</value> |
|
41 |
</_rangeStart> |
|
42 |
</value> |
|
28 |
<value><_rangeStart><value>$elev_min_m</value></_rangeStart></value> |
|
43 | 29 |
</_units> |
44 | 30 |
</min> |
45 | 31 |
</_avg> |
... | ... | |
53 | 39 |
<default>m</default> |
54 | 40 |
<to>m</to> |
55 | 41 |
<to></to> |
56 |
<value> |
|
57 |
<_rangeStart> |
|
58 |
<value> |
|
59 |
<_replace> |
|
60 |
<\bca\.?></\bca\.?> |
|
61 |
<value>$elev_min_m</value> |
|
62 |
</_replace> |
|
63 |
</value> |
|
64 |
</_rangeStart> |
|
65 |
</value> |
|
42 |
<value><_rangeStart><value>$elev_min_m</value></_rangeStart></value> |
|
66 | 43 |
</_units> |
67 | 44 |
</from> |
68 | 45 |
<to> |
... | ... | |
72 | 49 |
<to></to> |
73 | 50 |
<value> |
74 | 51 |
<_alt> |
75 |
<1> |
|
76 |
<_replace> |
|
77 |
<\bca\.?></\bca\.?> |
|
78 |
<value>$elev_max_m</value> |
|
79 |
</_replace> |
|
80 |
</1> |
|
81 |
<2> |
|
82 |
<_rangeEnd> |
|
83 |
<value> |
|
84 |
<_replace> |
|
85 |
<\bca\.?></\bca\.?> |
|
86 |
<value>$elev_min_m</value> |
|
87 |
</_replace> |
|
88 |
</value> |
|
89 |
</_rangeEnd> |
|
90 |
</2> |
|
52 |
<1>$elev_max_m</1> |
|
53 |
<2><_rangeEnd><value>$elev_min_m</value></_rangeEnd></2> |
|
91 | 54 |
</_alt> |
92 | 55 |
</value> |
93 | 56 |
</_units> |
inputs/ARIZ/Specimen/VegBIEN.csv | ||
---|---|---|
4 | 4 |
CollectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
5 | 5 |
CatalogNumberNumeric,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else/_alt/1", |
6 | 6 |
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else/_alt/2",Don't overwrite CatalogNumberNumeric |
7 |
MaximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
8 |
MinimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
9 |
MinimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
10 |
MaximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
11 |
MinimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
7 |
MaximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
8 |
MinimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
9 |
MinimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
10 |
MaximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
11 |
MinimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
12 | 12 |
CoordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1, |
13 | 13 |
BoundingBox,/location/locationcoords/footprintgeometry_dwc, |
14 | 14 |
DecimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
... | ... | |
52 | 52 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
53 | 53 |
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1", |
54 | 54 |
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2",Don't overwrite CatalogNumberNumeric |
55 |
MaximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
56 |
MinimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
55 |
MaximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
|
56 |
MinimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
|
57 | 57 |
Locality,/location/locationnarrative/_merge/1, |
58 | 58 |
ContinentOcean,/location/locationplace/*_id/placepath/continent, |
59 | 59 |
Country,/location/locationplace/*_id/placepath/country, |
inputs/ARIZ/Specimen/test.xml.ref | ||
---|---|---|
28 | 28 |
<default>m</default> |
29 | 29 |
<to>m</to> |
30 | 30 |
<to></to> |
31 |
<value> |
|
32 |
<_replace> |
|
33 |
<\bca\.?></\bca\.?> |
|
34 |
<value>$MaximumElevationInMeters</value> |
|
35 |
</_replace> |
|
36 |
</value> |
|
31 |
<value>$MaximumElevationInMeters</value> |
|
37 | 32 |
</_units> |
38 | 33 |
</max> |
39 | 34 |
<min> |
... | ... | |
41 | 36 |
<default>m</default> |
42 | 37 |
<to>m</to> |
43 | 38 |
<to></to> |
44 |
<value> |
|
45 |
<_rangeStart> |
|
46 |
<value> |
|
47 |
<_replace> |
|
48 |
<\bca\.?></\bca\.?> |
|
49 |
<value>$MinimumElevationInMeters</value> |
|
50 |
</_replace> |
|
51 |
</value> |
|
52 |
</_rangeStart> |
|
53 |
</value> |
|
39 |
<value><_rangeStart><value>$MinimumElevationInMeters</value></_rangeStart></value> |
|
54 | 40 |
</_units> |
55 | 41 |
</min> |
56 | 42 |
</_avg> |
... | ... | |
62 | 48 |
<default>m</default> |
63 | 49 |
<to>m</to> |
64 | 50 |
<to></to> |
65 |
<value> |
|
66 |
<_rangeStart> |
|
67 |
<value> |
|
68 |
<_replace> |
|
69 |
<\bca\.?></\bca\.?> |
|
70 |
<value>$MinimumElevationInMeters</value> |
|
71 |
</_replace> |
|
72 |
</value> |
|
73 |
</_rangeStart> |
|
74 |
</value> |
|
51 |
<value><_rangeStart><value>$MinimumElevationInMeters</value></_rangeStart></value> |
|
75 | 52 |
</_units> |
76 | 53 |
</from> |
77 | 54 |
<to> |
... | ... | |
81 | 58 |
<to></to> |
82 | 59 |
<value> |
83 | 60 |
<_alt> |
84 |
<1> |
|
85 |
<_replace> |
|
86 |
<\bca\.?></\bca\.?> |
|
87 |
<value>$MaximumElevationInMeters</value> |
|
88 |
</_replace> |
|
89 |
</1> |
|
90 |
<2> |
|
91 |
<_rangeEnd> |
|
92 |
<value> |
|
93 |
<_replace> |
|
94 |
<\bca\.?></\bca\.?> |
|
95 |
<value>$MinimumElevationInMeters</value> |
|
96 |
</_replace> |
|
97 |
</value> |
|
98 |
</_rangeEnd> |
|
99 |
</2> |
|
61 |
<1>$MaximumElevationInMeters</1> |
|
62 |
<2><_rangeEnd><value>$MinimumElevationInMeters</value></_rangeEnd></2> |
|
100 | 63 |
</_alt> |
101 | 64 |
</value> |
102 | 65 |
</_units> |
... | ... | |
276 | 239 |
<default>m</default> |
277 | 240 |
<to>m</to> |
278 | 241 |
<to></to> |
279 |
<value> |
|
280 |
<_replace> |
|
281 |
<\bca\.?></\bca\.?> |
|
282 |
<value>$MaximumDepthInMeters</value> |
|
283 |
</_replace> |
|
284 |
</value> |
|
242 |
<value>$MaximumDepthInMeters</value> |
|
285 | 243 |
</_units> |
286 | 244 |
</max> |
287 | 245 |
<min> |
... | ... | |
289 | 247 |
<default>m</default> |
290 | 248 |
<to>m</to> |
291 | 249 |
<to></to> |
292 |
<value> |
|
293 |
<_replace> |
|
294 |
<\bca\.?></\bca\.?> |
|
295 |
<value>$MinimumDepthInMeters</value> |
|
296 |
</_replace> |
|
297 |
</value> |
|
250 |
<value>$MinimumDepthInMeters</value> |
|
298 | 251 |
</_units> |
299 | 252 |
</min> |
300 | 253 |
</_avg> |
inputs/GBIF/Specimen/VegBIEN.csv | ||
---|---|---|
2 | 2 |
InstitutionCD,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
3 | 3 |
CollectionCD,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
4 | 4 |
CatalogNO,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
5 |
MaximumElevationInMeter,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
6 |
MinimumElevationInMeter,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
7 |
MinimumElevationInMeter,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
8 |
MaximumElevationInMeter,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
9 |
MinimumElevationInMeter,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
5 |
MaximumElevationInMeter,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
6 |
MinimumElevationInMeter,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
7 |
MinimumElevationInMeter,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
8 |
MaximumElevationInMeter,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
9 |
MinimumElevationInMeter,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
10 | 10 |
DecimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
11 | 11 |
VerbatimLatitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
12 | 12 |
DecimalLongitude,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
inputs/GBIF/Specimen/test.xml.ref | ||
---|---|---|
18 | 18 |
<default>m</default> |
19 | 19 |
<to>m</to> |
20 | 20 |
<to></to> |
21 |
<value> |
|
22 |
<_replace> |
|
23 |
<\bca\.?></\bca\.?> |
|
24 |
<value>$MaximumElevationInMeter</value> |
|
25 |
</_replace> |
|
26 |
</value> |
|
21 |
<value>$MaximumElevationInMeter</value> |
|
27 | 22 |
</_units> |
28 | 23 |
</max> |
29 | 24 |
<min> |
... | ... | |
31 | 26 |
<default>m</default> |
32 | 27 |
<to>m</to> |
33 | 28 |
<to></to> |
34 |
<value> |
|
35 |
<_rangeStart> |
|
36 |
<value> |
|
37 |
<_replace> |
|
38 |
<\bca\.?></\bca\.?> |
|
39 |
<value>$MinimumElevationInMeter</value> |
|
40 |
</_replace> |
|
41 |
</value> |
|
42 |
</_rangeStart> |
|
43 |
</value> |
|
29 |
<value><_rangeStart><value>$MinimumElevationInMeter</value></_rangeStart></value> |
|
44 | 30 |
</_units> |
45 | 31 |
</min> |
46 | 32 |
</_avg> |
... | ... | |
52 | 38 |
<default>m</default> |
53 | 39 |
<to>m</to> |
54 | 40 |
<to></to> |
55 |
<value> |
|
56 |
<_rangeStart> |
|
57 |
<value> |
|
58 |
<_replace> |
|
59 |
<\bca\.?></\bca\.?> |
|
60 |
<value>$MinimumElevationInMeter</value> |
|
61 |
</_replace> |
|
62 |
</value> |
|
63 |
</_rangeStart> |
|
64 |
</value> |
|
41 |
<value><_rangeStart><value>$MinimumElevationInMeter</value></_rangeStart></value> |
|
65 | 42 |
</_units> |
66 | 43 |
</from> |
67 | 44 |
<to> |
... | ... | |
71 | 48 |
<to></to> |
72 | 49 |
<value> |
73 | 50 |
<_alt> |
74 |
<1> |
|
75 |
<_replace> |
|
76 |
<\bca\.?></\bca\.?> |
|
77 |
<value>$MaximumElevationInMeter</value> |
|
78 |
</_replace> |
|
79 |
</1> |
|
80 |
<2> |
|
81 |
<_rangeEnd> |
|
82 |
<value> |
|
83 |
<_replace> |
|
84 |
<\bca\.?></\bca\.?> |
|
85 |
<value>$MinimumElevationInMeter</value> |
|
86 |
</_replace> |
|
87 |
</value> |
|
88 |
</_rangeEnd> |
|
89 |
</2> |
|
51 |
<1>$MaximumElevationInMeter</1> |
|
52 |
<2><_rangeEnd><value>$MinimumElevationInMeter</value></_rangeEnd></2> |
|
90 | 53 |
</_alt> |
91 | 54 |
</value> |
92 | 55 |
</_units> |
inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
---|---|---|
10 | 10 |
conceptual_darwin_2003_1_0_CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
11 | 11 |
dwc_dwcore_CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
12 | 12 |
dwc_terms_catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
13 |
conceptual_darwin_2003_1_0_MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
14 |
dwc_dwcore_MaximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
15 |
dwc_terms_maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
16 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
17 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
18 |
dwc_terms_minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
19 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
20 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
21 |
dwc_terms_minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
22 |
conceptual_darwin_2003_1_0_MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
23 |
dwc_dwcore_MaximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
24 |
dwc_terms_maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
25 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
26 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
27 |
dwc_terms_minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
13 |
conceptual_darwin_2003_1_0_MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
14 |
dwc_dwcore_MaximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
15 |
dwc_terms_maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
16 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
17 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
18 |
dwc_terms_minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
19 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
20 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
21 |
dwc_terms_minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
22 |
conceptual_darwin_2003_1_0_MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
23 |
dwc_dwcore_MaximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
24 |
dwc_terms_maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
25 |
conceptual_darwin_2003_1_0_MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
26 |
dwc_dwcore_MinimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
27 |
dwc_terms_minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
28 | 28 |
dwc_terms_coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1, |
29 | 29 |
conceptual_darwin_2003_1_0_CoordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2, |
30 | 30 |
conceptual_darwin_2003_1_0_BoundingBox,/location/locationcoords/footprintgeometry_dwc, |
... | ... | |
148 | 148 |
conceptual_darwin_2003_1_0_CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
149 | 149 |
dwc_dwcore_CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
150 | 150 |
dwc_terms_catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
151 |
conceptual_darwin_2003_1_0_MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
152 |
dwc_dwcore_MaximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
153 |
dwc_terms_maximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
154 |
conceptual_darwin_2003_1_0_MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
155 |
dwc_dwcore_MinimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
156 |
dwc_terms_minimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
151 |
conceptual_darwin_2003_1_0_MaximumDepth,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
|
152 |
dwc_dwcore_MaximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
|
153 |
dwc_terms_maximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
|
154 |
conceptual_darwin_2003_1_0_MinimumDepth,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
|
155 |
dwc_dwcore_MinimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
|
156 |
dwc_terms_minimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
|
157 | 157 |
conceptual_darwin_2003_1_0_Locality,/location/locationnarrative/_merge/1, |
158 | 158 |
dwc_dwcore_Locality,/location/locationnarrative/_merge/1, |
159 | 159 |
dwc_terms_locality,/location/locationnarrative/_merge/1, |
inputs/SpeciesLink/Specimen/test.xml.ref | ||
---|---|---|
47 | 47 |
<to>m</to> |
48 | 48 |
<to></to> |
49 | 49 |
<value> |
50 |
<_replace> |
|
51 |
<\bca\.?></\bca\.?> |
|
52 |
<value> |
|
53 |
<_alt> |
|
54 |
<0>$conceptual_darwin_2003_1_0_MaximumElevation</0> |
|
55 |
<1>$dwc_dwcore_MaximumElevationInMeters</1> |
|
56 |
<2>$dwc_terms_maximumElevationInMeters</2> |
|
57 |
</_alt> |
|
58 |
</value> |
|
59 |
</_replace> |
|
50 |
<_alt> |
|
51 |
<0>$conceptual_darwin_2003_1_0_MaximumElevation</0> |
|
52 |
<1>$dwc_dwcore_MaximumElevationInMeters</1> |
|
53 |
<2>$dwc_terms_maximumElevationInMeters</2> |
|
54 |
</_alt> |
|
60 | 55 |
</value> |
61 | 56 |
</_units> |
62 | 57 |
</max> |
... | ... | |
68 | 63 |
<value> |
69 | 64 |
<_rangeStart> |
70 | 65 |
<value> |
71 |
<_replace> |
|
72 |
<\bca\.?></\bca\.?> |
|
73 |
<value> |
|
74 |
<_alt> |
|
75 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
76 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
77 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
78 |
</_alt> |
|
79 |
</value> |
|
80 |
</_replace> |
|
66 |
<_alt> |
|
67 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
68 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
69 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
70 |
</_alt> |
|
81 | 71 |
</value> |
82 | 72 |
</_rangeStart> |
83 | 73 |
</value> |
... | ... | |
95 | 85 |
<value> |
96 | 86 |
<_rangeStart> |
97 | 87 |
<value> |
98 |
<_replace> |
|
99 |
<\bca\.?></\bca\.?> |
|
100 |
<value> |
|
101 |
<_alt> |
|
102 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
103 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
104 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
105 |
</_alt> |
|
106 |
</value> |
|
107 |
</_replace> |
|
88 |
<_alt> |
|
89 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
90 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
91 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
92 |
</_alt> |
|
108 | 93 |
</value> |
109 | 94 |
</_rangeStart> |
110 | 95 |
</value> |
... | ... | |
118 | 103 |
<value> |
119 | 104 |
<_alt> |
120 | 105 |
<1> |
121 |
<_replace> |
|
122 |
<\bca\.?></\bca\.?> |
|
123 |
<value> |
|
124 |
<_alt> |
|
125 |
<0>$conceptual_darwin_2003_1_0_MaximumElevation</0> |
|
126 |
<1>$dwc_dwcore_MaximumElevationInMeters</1> |
|
127 |
<2>$dwc_terms_maximumElevationInMeters</2> |
|
128 |
</_alt> |
|
129 |
</value> |
|
130 |
</_replace> |
|
106 |
<_alt> |
|
107 |
<0>$conceptual_darwin_2003_1_0_MaximumElevation</0> |
|
108 |
<1>$dwc_dwcore_MaximumElevationInMeters</1> |
|
109 |
<2>$dwc_terms_maximumElevationInMeters</2> |
|
110 |
</_alt> |
|
131 | 111 |
</1> |
132 | 112 |
<2> |
133 | 113 |
<_rangeEnd> |
134 | 114 |
<value> |
135 |
<_replace> |
|
136 |
<\bca\.?></\bca\.?> |
|
137 |
<value> |
|
138 |
<_alt> |
|
139 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
140 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
141 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
142 |
</_alt> |
|
143 |
</value> |
|
144 |
</_replace> |
|
115 |
<_alt> |
|
116 |
<0>$conceptual_darwin_2003_1_0_MinimumElevation</0> |
|
117 |
<1>$dwc_dwcore_MinimumElevationInMeters</1> |
|
118 |
<2>$dwc_terms_minimumElevationInMeters</2> |
|
119 |
</_alt> |
|
145 | 120 |
</value> |
146 | 121 |
</_rangeEnd> |
147 | 122 |
</2> |
... | ... | |
520 | 495 |
<to>m</to> |
521 | 496 |
<to></to> |
522 | 497 |
<value> |
523 |
<_replace> |
|
524 |
<\bca\.?></\bca\.?> |
|
525 |
<value> |
|
526 |
<_alt> |
|
527 |
<0>$conceptual_darwin_2003_1_0_MaximumDepth</0> |
|
528 |
<1>$dwc_dwcore_MaximumDepthInMeters</1> |
|
529 |
<2>$dwc_terms_maximumDepthInMeters</2> |
|
530 |
</_alt> |
|
531 |
</value> |
|
532 |
</_replace> |
|
498 |
<_alt> |
|
499 |
<0>$conceptual_darwin_2003_1_0_MaximumDepth</0> |
|
500 |
<1>$dwc_dwcore_MaximumDepthInMeters</1> |
|
501 |
<2>$dwc_terms_maximumDepthInMeters</2> |
|
502 |
</_alt> |
|
533 | 503 |
</value> |
534 | 504 |
</_units> |
535 | 505 |
</max> |
... | ... | |
539 | 509 |
<to>m</to> |
540 | 510 |
<to></to> |
541 | 511 |
<value> |
542 |
<_replace> |
|
543 |
<\bca\.?></\bca\.?> |
|
544 |
<value> |
|
545 |
<_alt> |
|
546 |
<0>$conceptual_darwin_2003_1_0_MinimumDepth</0> |
|
547 |
<1>$dwc_dwcore_MinimumDepthInMeters</1> |
|
548 |
<2>$dwc_terms_minimumDepthInMeters</2> |
|
549 |
</_alt> |
|
550 |
</value> |
|
551 |
</_replace> |
|
512 |
<_alt> |
|
513 |
<0>$conceptual_darwin_2003_1_0_MinimumDepth</0> |
|
514 |
<1>$dwc_dwcore_MinimumDepthInMeters</1> |
|
515 |
<2>$dwc_terms_minimumDepthInMeters</2> |
|
516 |
</_alt> |
|
552 | 517 |
</value> |
553 | 518 |
</_units> |
554 | 519 |
</min> |
inputs/MO/Specimen/VegBIEN.csv | ||
---|---|---|
2 | 2 |
InstitutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1", |
3 | 3 |
CollectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1", |
4 | 4 |
CatalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
5 |
MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
6 |
MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
7 |
MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
8 |
MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
9 |
MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
5 |
MaximumElevation,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
6 |
MinimumElevation,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
7 |
MinimumElevation,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
8 |
MaximumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
9 |
MinimumElevation,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
10 | 10 |
latitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
11 | 11 |
longitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value", |
12 | 12 |
DayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
inputs/MO/Specimen/test.xml.ref | ||
---|---|---|
18 | 18 |
<default>m</default> |
19 | 19 |
<to>m</to> |
20 | 20 |
<to></to> |
21 |
<value> |
|
22 |
<_replace> |
|
23 |
<\bca\.?></\bca\.?> |
|
24 |
<value>$MaximumElevation</value> |
|
25 |
</_replace> |
|
26 |
</value> |
|
21 |
<value>$MaximumElevation</value> |
|
27 | 22 |
</_units> |
28 | 23 |
</max> |
29 | 24 |
<min> |
... | ... | |
31 | 26 |
<default>m</default> |
32 | 27 |
<to>m</to> |
33 | 28 |
<to></to> |
34 |
<value> |
|
35 |
<_rangeStart> |
|
36 |
<value> |
|
37 |
<_replace> |
|
38 |
<\bca\.?></\bca\.?> |
|
39 |
<value>$MinimumElevation</value> |
|
40 |
</_replace> |
|
41 |
</value> |
|
42 |
</_rangeStart> |
|
43 |
</value> |
|
29 |
<value><_rangeStart><value>$MinimumElevation</value></_rangeStart></value> |
|
44 | 30 |
</_units> |
45 | 31 |
</min> |
46 | 32 |
</_avg> |
... | ... | |
52 | 38 |
<default>m</default> |
53 | 39 |
<to>m</to> |
54 | 40 |
<to></to> |
55 |
<value> |
|
56 |
<_rangeStart> |
|
57 |
<value> |
|
58 |
<_replace> |
|
59 |
<\bca\.?></\bca\.?> |
|
60 |
<value>$MinimumElevation</value> |
|
61 |
</_replace> |
|
62 |
</value> |
|
63 |
</_rangeStart> |
|
64 |
</value> |
|
41 |
<value><_rangeStart><value>$MinimumElevation</value></_rangeStart></value> |
|
65 | 42 |
</_units> |
66 | 43 |
</from> |
67 | 44 |
<to> |
... | ... | |
71 | 48 |
<to></to> |
72 | 49 |
<value> |
73 | 50 |
<_alt> |
74 |
<1> |
|
75 |
<_replace> |
|
76 |
<\bca\.?></\bca\.?> |
|
77 |
<value>$MaximumElevation</value> |
|
78 |
</_replace> |
|
79 |
</1> |
|
80 |
<2> |
|
81 |
<_rangeEnd> |
|
82 |
<value> |
|
83 |
<_replace> |
|
84 |
<\bca\.?></\bca\.?> |
|
85 |
<value>$MinimumElevation</value> |
|
86 |
</_replace> |
|
87 |
</value> |
|
88 |
</_rangeEnd> |
|
89 |
</2> |
|
51 |
<1>$MaximumElevation</1> |
|
52 |
<2><_rangeEnd><value>$MinimumElevation</value></_rangeEnd></2> |
|
90 | 53 |
</_alt> |
91 | 54 |
</value> |
92 | 55 |
</_units> |
inputs/QMOR/Specimen/VegBIEN.csv | ||
---|---|---|
5 | 5 |
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2", |
6 | 6 |
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else", |
7 | 7 |
verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value", |
8 |
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
9 |
minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
10 |
minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
11 |
maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
12 |
minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
8 |
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
9 |
minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
10 |
minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
11 |
maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
12 |
minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
13 | 13 |
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1, |
14 | 14 |
footprintWKT,/location/locationcoords/footprintgeometry_dwc, |
15 | 15 |
decimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value", |
inputs/QMOR/Specimen/test.xml.ref | ||
---|---|---|
37 | 37 |
<default>m</default> |
38 | 38 |
<to>m</to> |
39 | 39 |
<to></to> |
40 |
<value> |
|
41 |
<_replace> |
|
42 |
<\bca\.?></\bca\.?> |
|
43 |
<value>$maximumElevationInMeters</value> |
|
44 |
</_replace> |
|
45 |
</value> |
|
40 |
<value>$maximumElevationInMeters</value> |
|
46 | 41 |
</_units> |
47 | 42 |
</max> |
48 | 43 |
<min> |
... | ... | |
50 | 45 |
<default>m</default> |
51 | 46 |
<to>m</to> |
52 | 47 |
<to></to> |
53 |
<value> |
|
54 |
<_rangeStart> |
|
55 |
<value> |
|
56 |
<_replace> |
|
57 |
<\bca\.?></\bca\.?> |
|
58 |
<value>$minimumElevationInMeters</value> |
|
59 |
</_replace> |
|
60 |
</value> |
|
61 |
</_rangeStart> |
|
62 |
</value> |
|
48 |
<value><_rangeStart><value>$minimumElevationInMeters</value></_rangeStart></value> |
|
63 | 49 |
</_units> |
64 | 50 |
</min> |
65 | 51 |
</_avg> |
... | ... | |
73 | 59 |
<default>m</default> |
74 | 60 |
<to>m</to> |
75 | 61 |
<to></to> |
76 |
<value> |
|
77 |
<_rangeStart> |
|
78 |
<value> |
|
79 |
<_replace> |
|
80 |
<\bca\.?></\bca\.?> |
|
81 |
<value>$minimumElevationInMeters</value> |
|
82 |
</_replace> |
|
83 |
</value> |
|
84 |
</_rangeStart> |
|
85 |
</value> |
|
62 |
<value><_rangeStart><value>$minimumElevationInMeters</value></_rangeStart></value> |
|
86 | 63 |
</_units> |
87 | 64 |
</from> |
88 | 65 |
<to> |
... | ... | |
92 | 69 |
<to></to> |
93 | 70 |
<value> |
94 | 71 |
<_alt> |
95 |
<1> |
|
96 |
<_replace> |
|
97 |
<\bca\.?></\bca\.?> |
|
98 |
<value>$maximumElevationInMeters</value> |
|
99 |
</_replace> |
|
100 |
</1> |
|
101 |
<2> |
|
102 |
<_rangeEnd> |
|
103 |
<value> |
|
104 |
<_replace> |
|
105 |
<\bca\.?></\bca\.?> |
|
106 |
<value>$minimumElevationInMeters</value> |
|
107 |
</_replace> |
|
108 |
</value> |
|
109 |
</_rangeEnd> |
|
110 |
</2> |
|
72 |
<1>$maximumElevationInMeters</1> |
|
73 |
<2><_rangeEnd><value>$minimumElevationInMeters</value></_rangeEnd></2> |
|
111 | 74 |
</_alt> |
112 | 75 |
</value> |
113 | 76 |
</_units> |
mappings/VegCore-VegBIEN.csv | ||
---|---|---|
19 | 19 |
elevationInMeters,/location/elevation_m/_alt/1, |
20 | 20 |
verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value", |
21 | 21 |
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/max/_rangeEnd/value, |
22 |
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
22 |
maximumElevationInMeters,"/location/elevation_m/_alt/2/_avg/max/_units:[default=m,to=m,to=]/value", |
|
23 | 23 |
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/min/_rangeStart/value, |
24 |
minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
24 |
minimumElevationInMeters,"/location/elevation_m/_alt/2/_avg/min/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
25 | 25 |
verbatimElevation_m,/location/elevationrange_m/_range/from/_rangeStart/value, |
26 |
minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value/_replace:[""\bca\.?""=]/value",
|
|
26 |
minimumElevationInMeters,"/location/elevationrange_m/_range/from/_units:[default=m,to=m,to=]/value/_rangeStart/value", |
|
27 | 27 |
verbatimElevation_m,/location/elevationrange_m/_range/to/_rangeEnd/value, |
28 |
maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1/_replace:[""\bca\.?""=]/value",
|
|
29 |
minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value/_replace:[""\bca\.?""=]/value",
|
|
28 |
maximumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/1", |
|
29 |
minimumElevationInMeters,"/location/elevationrange_m/_range/to/_units:[default=m,to=m,to=]/value/_alt/2/_rangeEnd/value", |
|
30 | 30 |
landform,/location/landform, |
31 | 31 |
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1, |
32 | 32 |
coordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2, |
... | ... | |
160 | 160 |
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left", |
161 | 161 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
162 | 162 |
temperature,/location/locationevent/temperature_c, |
163 |
maximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
164 |
minimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value/_replace:[""\bca\.?""=]/value",
|
|
163 |
maximumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/max/_units:[default=m,to=m,to=]/value", |
|
164 |
minimumDepthInMeters,"/location/locationevent/waterdepth_m/_avg/min/_units:[default=m,to=m,to=]/value", |
|
165 | 165 |
locality,/location/locationnarrative/_merge/1, |
166 | 166 |
verbatimLocality,/location/locationnarrative/_merge/2, |
167 | 167 |
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?" |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Removed /_replace:["\bca\.?"=]/value filter from fields. It should be added on a per-datasource basis instead.