Project

General

Profile

1 4686 aaronmk
VegCore,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
2 4337 aaronmk
subplotID,"/location/_if[@name=""if subplot""]/cond/_exists/_first/1",
3
subplot,"/location/_if[@name=""if subplot""]/cond/_exists/_first/2",
4 4336 aaronmk
plotName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
5
locationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
6
fieldNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/else",
7
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
8
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
9
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
10
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2",
11
voucherType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
12
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else",
13 4324 aaronmk
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16 4770 aaronmk
plotArea_m2,/location/area_m2,
17 4768 aaronmk
plotArea_ha,/location/area_m2/_ha_to_m2/value,
18 4333 aaronmk
subplot,/location/authorlocationcode,
19 4796 aaronmk
elevationInMeters,/location/elevation_m/_alt/1,
20 4818 aaronmk
verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value",
21 4820 aaronmk
maximumElevationInMeters,/location/elevation_m/_alt/2/_avg/max,
22 4804 aaronmk
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/max/_rangeEnd/value,
23 4822 aaronmk
minimumElevationInMeters,/location/elevation_m/_alt/2/_avg/min,
24 4804 aaronmk
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/min/_rangeStart/value,
25 4805 aaronmk
verbatimElevation_m,/location/elevationrange_m/_range/from/_rangeStart/value,
26
verbatimElevation_m,/location/elevationrange_m/_range/to/_rangeEnd/value,
27 4082 aaronmk
landform,/location/landform,
28 4753 aaronmk
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1,
29
coordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2,
30 4726 aaronmk
footprintWKT,/location/locationcoords/footprintgeometry_dwc,
31 4753 aaronmk
decimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
32
verbatimLatitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
33
decimalLongitude,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
34
verbatimLongitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
35 3996 aaronmk
samplingProtocol,/location/locationevent/*_id/method/name,
36 4082 aaronmk
projectName,/location/locationevent/*_id/project/projectname,
37
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
38 4340 aaronmk
subplotID,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/1",
39
subplot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/2",
40
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
41
eventID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
42 4458 aaronmk
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/1",
43
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/2",
44
plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",
45
locationID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode",
46
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode",
47
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode",
48 4082 aaronmk
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
49
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
50 4563 aaronmk
endDate,/location/locationevent/obsenddate/_*/date/_alt/1,
51
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value,
52
startDate,/location/locationevent/obsstartdate/_*/date/_alt/1,
53
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value,
54 4753 aaronmk
precipitation,/location/locationevent/precipitation_m,
55 4786 aaronmk
acidity,/location/locationevent/soilobs/acidity_fraction,
56
baseSaturation,/location/locationevent/soilobs/basesaturation_fraction,
57
calcium,/location/locationevent/soilobs/calcium_fraction,
58
carbon,/location/locationevent/soilobs/carbon_fraction,
59 4754 aaronmk
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity_cmol_kg,
60 4786 aaronmk
clay,/location/locationevent/soilobs/clay_fraction,
61 4082 aaronmk
conductivity,/location/locationevent/soilobs/conductivity,
62 4786 aaronmk
magnesium,/location/locationevent/soilobs/magnesium_fraction,
63
nitrogen,/location/locationevent/soilobs/nitrogen_fraction,
64
organic,/location/locationevent/soilobs/organic_fraction,
65 4082 aaronmk
ph,/location/locationevent/soilobs/ph,
66 4786 aaronmk
phosphorus,/location/locationevent/soilobs/phosphorus_fraction,
67
potassium,/location/locationevent/soilobs/potassium_fraction,
68
sand,/location/locationevent/soilobs/sand_fraction,
69
silt,/location/locationevent/soilobs/silt_fraction,
70
sodium,/location/locationevent/soilobs/sodium_fraction,
71 4082 aaronmk
texture,/location/locationevent/soilobs/texture,
72 4566 aaronmk
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date,
73
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
74
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
75
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
76 3982 aaronmk
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
77 4789 aaronmk
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
78 4082 aaronmk
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
79 4781 aaronmk
intercept_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m,
80 4784 aaronmk
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m/_cm_to_m/value,
81 3969 aaronmk
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
82 4076 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
83 3969 aaronmk
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
84 4075 aaronmk
individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
85 4082 aaronmk
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
86 4057 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
87 4327 aaronmk
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
88
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
89 3969 aaronmk
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
90
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
91 4082 aaronmk
stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
92 4364 aaronmk
authorStemCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
93 4753 aaronmk
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter_m,
94 4082 aaronmk
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
95
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
96
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
97
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
98
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
99 4753 aaronmk
diameterBreastHeight,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m,
100
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,
101
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch_m,
102 4359 aaronmk
stemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
103 4828 aaronmk
tag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
104 4753 aaronmk
organismX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition_m,
105
organismY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition_m,
106 4833 aaronmk
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/1,
107
locationID,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
108
plotName,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
109
tag,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/then",
110
verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/1,
111
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/2,
112
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/3,
113 4082 aaronmk
growthForm,/location/locationevent/taxonoccurrence/growthform,
114 4559 aaronmk
verbatimGrowthForm,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>"
115 4554 aaronmk
cultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1,
116
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
117 3969 aaronmk
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
118 4371 aaronmk
taxonOccurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
119
individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2,
120 4834 aaronmk
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
121 4205 aaronmk
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
122
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
123
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
124 4718 aaronmk
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
125 4744 aaronmk
cultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/cultivar,
126 4718 aaronmk
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
127 4744 aaronmk
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/forma,
128 4718 aaronmk
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
129
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
130
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
131
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
132
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificname,
133
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnameauthor,
134
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnamewithauthor,
135
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
136 4749 aaronmk
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1,
137
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/first,
138
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/last,
139 4744 aaronmk
variety,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/variety,
140 4560 aaronmk
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value,
141
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
142
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
143
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
144 4205 aaronmk
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
145
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
146 4718 aaronmk
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
147
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
148
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
149
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
150
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
151
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
152
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificname,
153
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificnameauthor,
154
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
155
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
156 4193 aaronmk
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
157 3969 aaronmk
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
158 4082 aaronmk
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
159
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
160
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
161 4079 aaronmk
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
162 4753 aaronmk
temperature,/location/locationevent/temperature_c,
163 4820 aaronmk
maximumDepthInMeters,/location/locationevent/waterdepth_m/_avg/max,
164
minimumDepthInMeters,/location/locationevent/waterdepth_m/_avg/min,
165 3969 aaronmk
locality,/location/locationnarrative/_merge/1,
166
verbatimLocality,/location/locationnarrative/_merge/2,
167
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
168 4727 aaronmk
continent,/location/locationplace/*_id/placepath/continent,
169
country,/location/locationplace/*_id/placepath/country,
170
county,/location/locationplace/*_id/placepath/county,
171
stateProvince,/location/locationplace/*_id/placepath/stateprovince,
172 4082 aaronmk
plotNotes,/location/notespublic,
173 4753 aaronmk
slopeAspect,/location/slopeaspect_deg/_alt/1/_compass/value,
174
maxSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/max,
175
minSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/min,
176 4786 aaronmk
slopeGradient,/location/slopegradient_fraction/_alt/1,
177
maxSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/max,
178
minSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/min,
179 4286 aaronmk
subplotID,/location/sourceaccessioncode,
180 4753 aaronmk
subplotX,/location/sublocationxposition_m,
181
subplotY,/location/sublocationyposition_m,
182 4818 aaronmk
verbatimElevation,/location/verbatimelevation,
183 4806 aaronmk
verbatimElevation_m,/location/verbatimelevation,