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1
VegCore,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
2
subplotID,"/location/_if[@name=""if subplot""]/cond/_exists/_first/1",
3
subplot,"/location/_if[@name=""if subplot""]/cond/_exists/_first/2",
4
plotName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
5
locationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
6
fieldNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/else",
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occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
8
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/1",
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collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/1",
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collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/2/_join/2",
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voucherType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
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catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_join/3/_if[@name=""if indirect voucher""]/else",
13
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
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plotArea_m2,/location/area_m2,
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plotArea_ha,/location/area_m2/_ha_to_m2/value,
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subplot,/location/authorlocationcode,
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elevationInMeters,/location/elevation_m/_alt/1,
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verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value",
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maximumElevationInMeters,/location/elevation_m/_alt/2/_avg/max,
22
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/max/_rangeEnd/value,
23
minimumElevationInMeters,/location/elevation_m/_alt/2/_avg/min,
24
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/min/_rangeStart/value,
25
verbatimElevation_m,/location/elevationrange_m/_range/from/_rangeStart/value,
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verbatimElevation_m,/location/elevationrange_m/_range/to/_rangeEnd/value,
27
landform,/location/landform,
28
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1,
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coordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2,
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footprintWKT,/location/locationcoords/footprintgeometry_dwc,
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decimalLatitude,"/location/locationcoords/latitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
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verbatimLatitude,"/location/locationcoords/latitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
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decimalLongitude,"/location/locationcoords/longitude_deg/_alt/1/_nullIf:[null=0,type=float]/value",
34
verbatimLongitude,"/location/locationcoords/longitude_deg/_alt/2/_nullIf:[null=0,type=float]/value",
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samplingProtocol,/location/locationevent/*_id/method/name,
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projectName,/location/locationevent/*_id/project/projectname,
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projectID,/location/locationevent/*_id/project/sourceaccessioncode,
38
subplotID,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/1",
39
subplot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists/_first/2",
40
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
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eventID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
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eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/1",
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fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists/_first/2",
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plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",
45
locationID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode",
46
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode",
47
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode",
48
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
49
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
50
endDate,/location/locationevent/obsenddate/_*/date/_alt/1,
51
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value,
52
startDate,/location/locationevent/obsstartdate/_*/date/_alt/1,
53
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value,
54
precipitation,/location/locationevent/precipitation_m,
55
acidity,/location/locationevent/soilobs/acidity_fraction,
56
baseSaturation,/location/locationevent/soilobs/basesaturation_fraction,
57
calcium,/location/locationevent/soilobs/calcium_fraction,
58
carbon,/location/locationevent/soilobs/carbon_fraction,
59
cationExchangeCapacity,/location/locationevent/soilobs/cationexchangecapacity_cmol_kg,
60
clay,/location/locationevent/soilobs/clay_fraction,
61
conductivity,/location/locationevent/soilobs/conductivity,
62
magnesium,/location/locationevent/soilobs/magnesium_fraction,
63
nitrogen,/location/locationevent/soilobs/nitrogen_fraction,
64
organic,/location/locationevent/soilobs/organic_fraction,
65
ph,/location/locationevent/soilobs/ph,
66
phosphorus,/location/locationevent/soilobs/phosphorus_fraction,
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potassium,/location/locationevent/soilobs/potassium_fraction,
68
sand,/location/locationevent/soilobs/sand_fraction,
69
silt,/location/locationevent/soilobs/silt_fraction,
70
sodium,/location/locationevent/soilobs/sodium_fraction,
71
texture,/location/locationevent/soilobs/texture,
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dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date,
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dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
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monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
75
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
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individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
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coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
78
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
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intercept_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m,
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intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m/_cm_to_m/value,
81
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
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recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
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sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
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individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
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voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
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catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
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collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
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collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
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institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
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occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
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stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
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authorStemCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
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basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter_m,
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canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
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canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
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diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
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lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
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stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
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diameterBreastHeight_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m,
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height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,
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heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch_m,
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stemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
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tag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
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organismX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition_m,
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organismY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition_m,
106
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/1,
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locationID,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
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plotName,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
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tag,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/then",
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verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/1,
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scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/2,
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scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/3,
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growthForm,/location/locationevent/taxonoccurrence/growthform,
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verbatimGrowthForm,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>"
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cultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1,
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establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
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establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
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taxonOccurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
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individualID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2,
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occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
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identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
122
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
123
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
124
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
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cultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/cultivar,
126
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
127
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/forma,
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genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
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kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
130
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
131
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
132
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificname,
133
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnameauthor,
134
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/scientificnamewithauthor,
135
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
136
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1,
137
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/first,
138
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/last,
139
variety,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/variety,
140
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value,
141
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
142
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
143
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
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taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
145
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
146
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
147
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
148
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
149
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
150
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
151
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
152
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificname,
153
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/scientificnameauthor,
154
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
155
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
156
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
157
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
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recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
159
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
160
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
161
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
162
temperature,/location/locationevent/temperature_c,
163
maximumDepthInMeters,/location/locationevent/waterdepth_m/_avg/max,
164
minimumDepthInMeters,/location/locationevent/waterdepth_m/_avg/min,
165
locality,/location/locationnarrative/_merge/1,
166
verbatimLocality,/location/locationnarrative/_merge/2,
167
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
168
continent,/location/locationplace/*_id/placepath/continent,
169
country,/location/locationplace/*_id/placepath/country,
170
county,/location/locationplace/*_id/placepath/county,
171
stateProvince,/location/locationplace/*_id/placepath/stateprovince,
172
plotNotes,/location/notespublic,
173
slopeAspect,/location/slopeaspect_deg/_alt/1/_compass/value,
174
maxSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/max,
175
minSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/min,
176
slopeGradient,/location/slopegradient_fraction/_alt/1,
177
maxSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/max,
178
minSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/min,
179
subplotID,/location/sourceaccessioncode,
180
subplotX,/location/sublocationxposition_m,
181
subplotY,/location/sublocationyposition_m,
182
verbatimElevation,/location/verbatimelevation,
183
verbatimElevation_m,/location/verbatimelevation,
(10-10/15)