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Revision 4870

Added by Aaron Marcuse-Kubitza over 12 years ago

inputs/SALVIAS/stems/map.csv: Remapped stem_dbh from diameterBreastHeight_m to diameterBreastHeight_cm, assuming units based on the units for plotObservations.intercept_cm, which measures the same dimension

View differences:

inputs/SALVIAS/stems/map.csv
4 4 
PlotObsID,individualID,,
5 5 
NoInd,stemCount,,
6 6 
basal_diam,basalDiameter,,
7 
stem_dbh,diameterBreastHeight_m,,
7 
stem_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for plotObservations.intercept_cm, which measures the same dimension"
8 8 
gentry_dbh,diameterBreastHeightGentry,,
9 9 
stem_notes,stemNotes,,
10 10 
stem_tag1,tag,/_alt/2,"The second tag supercedes the first. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
inputs/SALVIAS/stems/VegBIEN.csv
7 7 
gentry_dbh,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
8 8 
stem_liana_infestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
9 9 
stem_notes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
10 
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m,
10 
stem_dbh,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m/_cm_to_m/value,"Assuming units based on the units for plotObservations.intercept_cm, which measures the same dimension"
11 11 
stem_height_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,"Brad: Same as for height, but applies to individuals stems, not trees. Rare."
12 12 
stem_height_first_branch_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch_m,"Brad: Same as for ht_first_branch_m, but applies to individuals stems, not trees. Rare."
13 13 
stem_id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
inputs/SALVIAS/stems/test.xml.ref
57 57 
                                        </userdefined_id>
58 58 
                                        <definedvalue>$stem_notes</definedvalue>
59 59 
                                    </definedvalue>
60 
                                    <diameterbreastheight_m>$stem_dbh</diameterbreastheight_m>
60 
                                    <diameterbreastheight_m><_cm_to_m><value>$stem_dbh</value></_cm_to_m></diameterbreastheight_m>
61 61 
                                    <height_m>$stem_height_m</height_m>
62 62 
                                    <heightfirstbranch_m>$stem_height_first_branch_m</heightfirstbranch_m>
63 63 
                                    <sourceaccessioncode>$stem_id</sourceaccessioncode>
inputs/SALVIAS/stems/new_terms.csv
1 1 
PlotObsID,individualID,,
2 2 
NoInd,stemCount,,
3 3 
basal_diam,basalDiameter,,
4 
stem_dbh,diameterBreastHeight_m,,
4 
stem_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for plotObservations.intercept_cm, which measures the same dimension"
5 5 
gentry_dbh,diameterBreastHeightGentry,,
6 6 
stem_tag1,tag,/_alt/2,"The second tag supercedes the first. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once."
7 7 
stem_tag2,tag,/_alt/1,"The second tag supercedes the first. Brad: See commend for tag1. Your mapping for tag2 looks correct. Probably both values would go here, only nested, with one superceding the other."

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