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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 4927 about 12 years Aaron Marcuse-Kubitza csv2db: COPY FROM mode: Removed no longer neede...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 4931 about 12 years Aaron Marcuse-Kubitza inputs/ARIZ/Specimen/test.xml.ref: Updated afte...
  lib 4939 about 12 years Aaron Marcuse-Kubitza sql.py: DbConn.col_info(): Parse array types as...
  mappings 4922 about 12 years Aaron Marcuse-Kubitza mappings/VegCore.csv: Added and mapped aggregat...
  schemas 4943 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonpath: Renamed canon_i...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 about 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 about 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 11.1 KB 4793 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Added note that `make ...
map 1.22 KB 3475 over 12 years Aaron Marcuse-Kubitza root map: Run bin/map with a nice increment of ...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
4943 09/24/2012 01:19 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonpath: Renamed canon_id to canon_taxonpath_id to clarify that this is a recursive fkey. The convention is that a recursive fkey includes the table name plus a descriptive prefix.

4942 09/24/2012 01:14 PM Aaron Marcuse-Kubitza

schemas/filter_ERD.csv: Don't filter out fkeys from taxonpath to itself

4941 09/24/2012 11:32 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonpath: Added canon_id for the canonical (scrubbed) taxonpath determined by TNRS

4940 09/24/2012 11:24 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonpath: taxonpath_unique_within_datasource_by_name unique index: Added otherranks, so that ranks without a named column will be used in uniquely identifying the taxonpath

4939 09/24/2012 11:22 AM Aaron Marcuse-Kubitza

sql.py: DbConn.col_info(): Parse array types as sql_gen.ArrayType

4938 09/24/2012 11:22 AM Aaron Marcuse-Kubitza

sql_gen.py: EnsureNotNull: Support ArrayType types

4937 09/24/2012 11:21 AM Aaron Marcuse-Kubitza

strings.py: remove_prefix(), remove_suffix(): Added require param to raise aan exception if the string does not have the given prefix/suffix

4936 09/24/2012 11:06 AM Aaron Marcuse-Kubitza

sql.py: DbConn.col_info(): Moved parsing of user-defined datatypes to Python code, so that parsing for other composite types which also requires both data_type and udt_name can easily be added

4935 09/24/2012 11:03 AM Aaron Marcuse-Kubitza

sql_gen.py: Added ArrayType

4934 09/24/2012 10:29 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Scope taxonpath instead of taxon with taxonscope, because a morphospecies name is specific to a datasource entity, so it should go in the datasource-specific taxonpath table instead of the datasource-general taxon table

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