Project

General

Profile

1
VegCore,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments
2
subplot,"/location/_if[@name=""if subplot""]/cond/_exists",
3
plotName,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
4
locationID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
5
fieldNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/else",
6
occurrenceID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
7
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/cond/_exists",
8
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1",
9
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/1",
10
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/2",
11
voucherType,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
12
catalogNumber,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/3/_if[@name=""if indirect voucher""]/else",
13
locationID,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode",
14
plotName,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
15
locationID,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
16
plotArea_m2,/location/area_m2,
17
plotArea_ha,/location/area_m2/_ha_to_m2/value,
18
subplot,/location/authorlocationcode,
19
elevationInMeters,/location/elevation_m/_alt/1,
20
verbatimElevation,"/location/elevation_m/_alt/1/_units:[to=m,to=]/value",
21
maximumElevationInMeters,/location/elevation_m/_alt/2/_avg/max,
22
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/max/_rangeEnd/value,
23
minimumElevationInMeters,/location/elevation_m/_alt/2/_avg/min,
24
verbatimElevation_m,/location/elevation_m/_alt/2/_avg/min/_rangeStart/value,
25
verbatimElevation_m,/location/elevationrange_m/_range/from/_rangeStart/value,
26
verbatimElevation_m,/location/elevationrange_m/_range/to/_rangeEnd/value,
27
landform,/location/landform,
28
coordinateUncertaintyInMeters,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/1,
29
coordinatePrecision,/location/locationcoords/coordsaccuracy_deg/_noCV/value/_alt/2,
30
footprintWKT,/location/locationcoords/footprintgeometry_dwc,
31
decimalLatitude,"/location/locationcoords/latitude_deg/_nullIf:[null=0,type=float]/value",
32
decimalLongitude,"/location/locationcoords/longitude_deg/_nullIf:[null=0,type=float]/value",
33
latitude_DMS,/location/locationcoords/verbatimlatitude,
34
verbatimLatitude,/location/locationcoords/verbatimlatitude,
35
longitude_DMS,/location/locationcoords/verbatimlongitude,
36
verbatimLongitude,/location/locationcoords/verbatimlongitude,
37
samplingProtocol,/location/locationevent/*_id/method/name,
38
projectName,/location/locationevent/*_id/project/projectname,
39
projectID,/location/locationevent/*_id/project/sourceaccessioncode,
40
subplot,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists",
41
subplotID,"/location/locationevent/_if[@name=""if subplot""]/cond/_exists",
42
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/else/authoreventcode",
43
eventID,"/location/locationevent/_if[@name=""if subplot""]/else/sourceaccessioncode",
44
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists",
45
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/cond/_exists",
46
plotName,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/authorlocationcode",
47
locationID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode",
48
fieldNumber,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/authorlocationcode",
49
eventID,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if event""]/then/parent_id/locationevent/sourceaccessioncode",
50
communityID,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
51
communityName,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,
52
endDate,/location/locationevent/obsenddate/_*/date/_alt/1,
53
eventDate,/location/locationevent/obsenddate/_*/date/_alt/2/_dateRangeEnd/value,
54
startDate,/location/locationevent/obsstartdate/_*/date/_alt/1,
55
eventDate,/location/locationevent/obsstartdate/_*/date/_alt/2/_dateRangeStart/value,
56
precipitation,/location/locationevent/precipitation_m,
57
acidity_percent,/location/locationevent/soilobs/acidity_fraction/_percent_to_fraction/value,
58
baseSaturation_percent,/location/locationevent/soilobs/basesaturation_fraction/_percent_to_fraction/value,
59
calcium_percent,/location/locationevent/soilobs/calcium_fraction/_percent_to_fraction/value,
60
carbon_percent,/location/locationevent/soilobs/carbon_fraction/_percent_to_fraction/value,
61
cationExchangeCapacity_cmol_kg,/location/locationevent/soilobs/cationexchangecapacity_cmol_kg,
62
clay_percent,/location/locationevent/soilobs/clay_fraction/_percent_to_fraction/value,
63
conductivity,/location/locationevent/soilobs/conductivity,
64
magnesium_percent,/location/locationevent/soilobs/magnesium_fraction/_percent_to_fraction/value,
65
nitrogen_percent,/location/locationevent/soilobs/nitrogen_fraction/_percent_to_fraction/value,
66
organic_percent,/location/locationevent/soilobs/organic_fraction/_percent_to_fraction/value,
67
ph,/location/locationevent/soilobs/ph,
68
phosphorus_percent,/location/locationevent/soilobs/phosphorus_fraction/_percent_to_fraction/value,
69
potassium_percent,/location/locationevent/soilobs/potassium_fraction/_percent_to_fraction/value,
70
sand_percent,/location/locationevent/soilobs/sand_fraction/_percent_to_fraction/value,
71
silt_percent,/location/locationevent/soilobs/silt_fraction/_percent_to_fraction/value,
72
sodium_percent,/location/locationevent/soilobs/sodium_fraction/_percent_to_fraction/value,
73
texture,/location/locationevent/soilobs/texture,
74
dateCollected,/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/1/_*/date,
75
dayCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
76
monthCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
77
yearCollected,"/location/locationevent/taxonoccurrence/aggregateoccurrence/collectiondate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
78
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
79
coverPercent,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value,
80
censusNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/definedvalue[*_id/userdefined[tablename=aggregateoccurrence,userdefinedname=censusNo]]:[@fkey=tablerecord_id]/definedvalue",
81
intercept_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m,
82
intercept_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/linecover_m/_cm_to_m/value,
83
fieldNotes,/location/locationevent/taxonoccurrence/aggregateoccurrence/notes,
84
recordNumber,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/collectionnumber,
85
sex,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/definedvalue[*_id/userdefined[tablename=plantobservation,userdefinedname=sex]]:[@fkey=tablerecord_id]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections"
86
individualID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/sourceaccessioncode,
87
voucherType,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
88
catalogNumber,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/else",
89
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
90
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
91
institutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname,
92
occurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
93
stemCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemcount,
94
authorStemCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/authorstemcode,
95
basalDiameter,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/basaldiameter_m,
96
canopyForm,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyForm]]:[@fkey=tablerecord_id]/definedvalue",
97
canopyPosition,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=canopyPosition]]:[@fkey=tablerecord_id]/definedvalue",
98
diameterBreastHeightGentry,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=gentryDiameter]]:[@fkey=tablerecord_id]/definedvalue",
99
lianaInfestation,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=lianaInfestation]]:[@fkey=tablerecord_id]/definedvalue",
100
stemNotes,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/definedvalue[*_id/userdefined[tablename=stemobservation,userdefinedname=notes]]:[@fkey=tablerecord_id]/definedvalue",
101
diameterBreastHeight_m,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m,
102
diameterBreastHeight_cm,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m/_cm_to_m/value,
103
diameterBreastHeight_in,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/diameterbreastheight_m/_in_to_m/value,
104
height,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/height_m,
105
heightFirstBranch,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/heightfirstbranch_m,
106
stemID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/sourceaccessioncode,
107
tag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag,
108
organismX,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/xposition_m,
109
organismY,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/yposition_m,
110
aggregateOccurrenceID,/location/locationevent/taxonoccurrence/aggregateoccurrence/sourceaccessioncode,
111
recordNumber,/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/1,
112
locationID,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
113
plotName,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
114
tag,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/then",
115
verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/1,
116
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/2,
117
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/3,
118
growthForm,/location/locationevent/taxonoccurrence/growthform,
119
verbatimGrowthForm,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>"
120
cultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1,
121
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
122
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
123
taxonOccurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,
124
aggregateOccurrenceID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/cond/_exists",
125
individualID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/else",
126
occurrenceID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
127
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
128
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
129
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
130
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author,
131
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class,
132
cultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/cultivar,
133
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
134
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/forma,
135
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
136
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom,
137
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order,
138
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum,
139
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
140
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1,
141
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/first,
142
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_name/last,
143
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname,
144
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor,
145
variety,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/variety,
146
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value,
147
dayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
148
monthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
149
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
150
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
151
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
152
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
153
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
154
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
155
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
156
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
157
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
158
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
159
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
160
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
161
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname,
162
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
163
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
164
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/first,
165
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_name/last,
166
voucherType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left",
167
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
168
temperature,/location/locationevent/temperature_c,
169
maximumDepthInMeters,/location/locationevent/waterdepth_m/_avg/max,
170
minimumDepthInMeters,/location/locationevent/waterdepth_m/_avg/min,
171
locality,/location/locationnarrative/_merge/1,
172
verbatimLocality,/location/locationnarrative/_merge/2,
173
habitat,"/location/locationnarrative/_merge/3/_label[label=""habitat""]/value","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Vegetation'. Bob, Nick: keep as user defined or create special element?"
174
continent,/location/locationplace/*_id/placepath/continent,
175
country,/location/locationplace/*_id/placepath/country,
176
county,/location/locationplace/*_id/placepath/county,
177
stateProvince,/location/locationplace/*_id/placepath/stateprovince,
178
plotNotes,/location/notespublic,
179
parentPlotName,/location/parent_id/location/authorlocationcode,
180
parentLocationID,/location/parent_id/location/sourceaccessioncode,
181
slopeAspect,/location/slopeaspect_deg/_alt/1/_compass/value,
182
maxSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/max,
183
minSlopeAspect,/location/slopeaspect_deg/_alt/2/_avg/min,
184
slopeGradient,/location/slopegradient_fraction/_alt/1,
185
maxSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/max,
186
minSlopeGradient,/location/slopegradient_fraction/_alt/2/_avg/min,
187
subplotID,/location/sourceaccessioncode,
188
subplotX,/location/sublocationxposition_m,
189
subplotY,/location/sublocationyposition_m,
190
verbatimElevation,/location/verbatimelevation,
191
verbatimElevation_m,/location/verbatimelevation,
192
subplotID,VegBIEN:/_simplifyPath:[next=parent_id]/path,
193
OMIT,,
194
PRIVATE,,
195
UNUSED,,
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