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Revision 5062

mappings/VegCore.csv: Renamed verbatim* taxonomic terms to original* because in most datasources, they are in fact for the original taxon determination of the organism (which can be a completely different name than the primary determination), rather than merely unscrubbed versions of the primary taxonomic name elements. Note that SALVIAS's orig_* terms do appear to be merely unscrubbed versions, but it's not a problem to add an additional taxon determination for them.

View differences:

inputs/Madidi/Organism/map.csv
14 14
Plot specimen,*Plot specimen,,
15 15
Expedition specimen,*Expedition specimen,,
16 16
Project specimen,*Project specimen,,
17
Field family,verbatimFamily,,
18
Field name,verbatimGenus,,Often = Genera
17
Field family,originalFamily,,
18
Field name,originalGenus,,Often = Genera
19 19
Family (revised),family,,
20 20
Specie+autor,scientificNameWithAuthorship,,
21 21
Genera,genus,,
inputs/Madidi/Organism/new_terms.csv
6 6
Number of subplot,subplot,,
7 7
Index collector,recordedBy,,
8 8
Specimen,catalogNumber,,
9
Field family,verbatimFamily,,
10
Field name,verbatimGenus,,Often = Genera
9
Field family,originalFamily,,
10
Field name,originalGenus,,Often = Genera
11 11
Family (revised),family,,
12 12
Specie+autor,scientificNameWithAuthorship,,
13 13
Genera,genus,,
inputs/SALVIAS-CSV/Organism/map.csv
51 51
stem_canopy_position,canopyPosition,,
52 52
stem_liana_infestation,lianaInfestation,,
53 53
notes,stemNotes,,
54
orig_family,verbatimFamily,,Brad: OMIT
55
orig_species,verbatimSpecificEpithet,,Brad: OMIT
54
orig_family,originalFamily,,Brad: OMIT
55
orig_species,originalSpecificEpithet,,Brad: OMIT
inputs/SALVIAS-CSV/Organism/new_terms.csv
35 35
stem_canopy_form,canopyForm,,
36 36
stem_canopy_position,canopyPosition,,
37 37
stem_liana_infestation,lianaInfestation,,
38
orig_family,verbatimFamily,,Brad: OMIT
39
orig_species,verbatimSpecificEpithet,,Brad: OMIT
38
orig_family,originalFamily,,Brad: OMIT
39
orig_species,originalSpecificEpithet,,Brad: OMIT
inputs/SALVIAS/plotObservations/map.csv
56 56
other_annotations,*other_annotations,,
57 57
morphocf,*morphocf,,
58 58
IsMorpho,*IsMorpho,,
59
OrigFamily,verbatimFamily,,Brad: OMIT
60
OrigGenus,verbatimGenus,,
61
OrigSpecies,verbatimSpecificEpithet,,Brad: OMIT
59
OrigFamily,originalFamily,,Brad: OMIT
60
OrigGenus,originalGenus,,
61
OrigSpecies,originalSpecificEpithet,,Brad: OMIT
62 62
OrigAuth,*OrigAuth,,
63 63
phenology,*phenology,,
64 64
canopy_position,canopyPosition,,
inputs/SALVIAS/plotObservations/new_terms.csv
27 27
ht_first_branch_m,heightFirstBranch,,
28 28
NoInd,individualCount,,"Brad: This is a count of number of indiiduals for an *aggregate* observation. For VegBank, I'm not sure. Not exactly the same as stemCount. An individual tree could have 3 stems but would still only count as 1. We need to check with Bob on this."
29 29
cfaff,identificationQualifier,,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank."
30
OrigFamily,verbatimFamily,,Brad: OMIT
31
OrigGenus,verbatimGenus,,
32
OrigSpecies,verbatimSpecificEpithet,,Brad: OMIT
30
OrigFamily,originalFamily,,Brad: OMIT
31
OrigGenus,originalGenus,,
32
OrigSpecies,originalSpecificEpithet,,Brad: OMIT
33 33
temp_dbh,diameterBreastHeight_cm,,"Assuming units based on the units for intercept_cm, which measures the same dimension"
inputs/GBIF/Specimen/map.csv
9 9
CatalogNO,catalogNumber,,
10 10
LastDateModified,dcterms:modified,,
11 11
IdentifiedBy,identifiedBy,,
12
ScientificNameOriginal,verbatimScientificName,,
12
ScientificNameOriginal,originalScientificName,,
13 13
AuthorOfScientificName,scientificNameAuthorship,,
14 14
ScientificName,scientificName,,
15
GBIFFamilyOriginal,verbatimFamily,,
15
GBIFFamilyOriginal,originalFamily,,
16 16
Family,family,,
17
GBIFGenusOriginal,verbatimGenus,,
17
GBIFGenusOriginal,originalGenus,,
18 18
Genus,genus,,
19 19
Country,country,,
20 20
Locality,locality,,
inputs/GBIF/Specimen/new_terms.csv
3 3
CollectionCD,collectionCode,,
4 4
CatalogNO,catalogNumber,,
5 5
LastDateModified,dcterms:modified,,
6
ScientificNameOriginal,verbatimScientificName,,
6
ScientificNameOriginal,originalScientificName,,
7 7
AuthorOfScientificName,scientificNameAuthorship,,
8
GBIFFamilyOriginal,verbatimFamily,,
9
GBIFGenusOriginal,verbatimGenus,,
8
GBIFFamilyOriginal,originalFamily,,
9
GBIFGenusOriginal,originalGenus,,
10 10
MinimumElevationInMeter,minimumElevationInMeters,,
11 11
MaximumElevationInMeter,maximumElevationInMeters,,
inputs/VegBank/taxonobservation_/map.csv
2 2
plantconcept_id,*plantconcept_id,,
3 3
taxonobservation_id,taxonOccurrenceID,,
4 4
observation_id,eventID,,
5
authorplantname,verbatimScientificName,,
5
authorplantname,originalScientificName,,
6 6
taxonobservation_reference_id,*taxonobservation_reference_id,,
7 7
taxoninferencearea,*taxoninferencearea,,
8 8
emb_taxonobservation,*emb_taxonobservation,,
inputs/VegBank/taxonobservation_/new_terms.csv
1 1
taxonobservation_id,taxonOccurrenceID,,
2 2
observation_id,eventID,,
3
authorplantname,verbatimScientificName,,
3
authorplantname,originalScientificName,,
4 4
museumaccessionnumber,catalogNumber,,
5 5
interpretationdate,dateIdentified,,
6 6
collectiondate,dateCollected,,
mappings/VegCore-VegBIEN.csv
113 113
locationID,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
114 114
plotName,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists",
115 115
tag,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/then",
116
verbatimScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/1,
116
originalScientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/1,
117 117
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/2,
118 118
scientificName,/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_first/3,
119 119
growthForm,/location/locationevent/taxonoccurrence/growthform,
......
161 161
yearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
162 162
taxonRemarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes,
163 163
identificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
164
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
165
verbatimClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
166
verbatimCultivar,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/cultivar,
167
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
168
verbatimForma,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/forma,
169
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
170
verbatimKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
171
verbatimOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
172
verbatimPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
173
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
174
verbatimSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/1,
175
verbatimTaxonRank,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/2/_join_words/1,
176
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/2/_join_words/2,
177
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname,
178
verbatimScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/1,
179
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/1,
180
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/1,
181
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/2,
182
verbatimSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/3,
183
verbatimSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/4,
184
verbatimTaxonRank,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/5/_join_words/1,
185
verbatimInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/5/_join_words/2,
186
verbatimVariety,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/6/_join_words:[1=var.]/2,
187
verbatimForma,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/7/_join_words:[1=fm.]/2,
188
verbatimCultivar,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/8/_join_words:[1=cult.]/2,
189
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/2,
190
verbatimVariety,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/variety,
191
verbatimIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
164
originalScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
165
originalClass,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
166
originalCultivar,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/cultivar,
167
originalFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
168
originalForma,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/forma,
169
originalGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
170
originalKingdom,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
171
originalOrder,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
172
originalPhylum,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
173
originalSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
174
originalSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/1,
175
originalTaxonRank,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/2/_join_words/1,
176
originalInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies/_alt/2/_join_words/2,
177
originalScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname,
178
originalScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/1,
179
originalScientificName,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/1,
180
originalFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/1,
181
originalGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/2,
182
originalSpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/3,
183
originalSubspecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/4,
184
originalTaxonRank,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/5/_join_words/1,
185
originalInfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/5/_join_words/2,
186
originalVariety,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/6/_join_words:[1=var.]/2,
187
originalForma,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/7/_join_words:[1=fm.]/2,
188
originalCultivar,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/1/_first/2/_join_words/8/_join_words:[1=cult.]/2,
189
originalScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_first/2/_join_words/2,
190
originalVariety,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/variety,
191
originalIdentificationQualifier,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
192 192
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname,
193 193
recordedBy.givenName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/1,
194 194
recordedBy.surName,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/2,
mappings/VegCore.csv
31 31
behavior,,http://rs.tdwg.org/dwc/terms/#behavior,29
32 32
catalogNumber,,http://rs.tdwg.org/dwc/terms/#catalogNumber,20
33 33
class,,http://rs.tdwg.org/dwc/terms/#class,144
34
verbatimClass,,"http://rs.tdwg.org/dwc/terms/#class, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","144, 152"
34
originalClass,,"http://rs.tdwg.org/dwc/terms/#class, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",144
35 35
collectionCode,,http://rs.tdwg.org/dwc/terms/#collectionCode,12
36 36
collectionID,,http://rs.tdwg.org/dwc/terms/#collectionID,9
37 37
continent,,http://rs.tdwg.org/dwc/terms/#continent,59
......
72 72
eventRemarks,,http://rs.tdwg.org/dwc/terms/#eventRemarks,55
73 73
eventTime,,http://rs.tdwg.org/dwc/terms/#eventTime,45
74 74
family,,http://rs.tdwg.org/dwc/terms/#family,146
75
verbatimFamily,,"http://rs.tdwg.org/dwc/terms/#family, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","146, 152"
75
originalFamily,,"http://rs.tdwg.org/dwc/terms/#family, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",146
76 76
fieldNotes,,http://rs.tdwg.org/dwc/terms/#fieldNotes,54
77 77
fieldNumber,,http://rs.tdwg.org/dwc/terms/#fieldNumber,53
78 78
footprintSRS,,http://rs.tdwg.org/dwc/terms/#footprintSRS,92
......
80 80
footprintWKT,,http://rs.tdwg.org/dwc/terms/#footprintWKT,91
81 81
formation,,http://rs.tdwg.org/dwc/terms/#formation,115
82 82
genus,,http://rs.tdwg.org/dwc/terms/#genus,147
83
verbatimGenus,,"http://rs.tdwg.org/dwc/terms/#genus, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","147, 152"
83
originalGenus,,"http://rs.tdwg.org/dwc/terms/#genus, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",147
84 84
geodeticDatum,,http://rs.tdwg.org/dwc/terms/#geodeticDatum,87
85 85
geologicalContextID,,http://rs.tdwg.org/dwc/terms/#geologicalContextID,100
86 86
georeferenceProtocol,,http://rs.tdwg.org/dwc/terms/#georeferenceProtocol,96
......
97 97
highestBiostratigraphicZone,,http://rs.tdwg.org/dwc/terms/#highestBiostratigraphicZone,112
98 98
identificationID,,http://rs.tdwg.org/dwc/terms/#identificationID,118
99 99
identificationQualifier,,http://rs.tdwg.org/dwc/terms/#identificationQualifier,124
100
verbatimIdentificationQualifier,,"http://rs.tdwg.org/dwc/terms/#identificationQualifier, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","124, 152"
100
originalIdentificationQualifier,,"http://rs.tdwg.org/dwc/terms/#identificationQualifier, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",124
101 101
identificationReferences,,http://rs.tdwg.org/dwc/terms/#identificationReferences,121
102 102
identificationRemarks,,http://rs.tdwg.org/dwc/terms/#identificationRemarks,123
103 103
identificationVerificationStatus,,http://rs.tdwg.org/dwc/terms/#identificationVerificationStatus,122
......
106 106
individualID,,http://rs.tdwg.org/dwc/terms/#individualID,24
107 107
informationWithheld,,http://rs.tdwg.org/dwc/terms/#informationWithheld,16
108 108
infraspecificEpithet,,http://rs.tdwg.org/dwc/terms/#infraspecificEpithet,150
109
verbatimInfraspecificEpithet,,"http://rs.tdwg.org/dwc/terms/#infraspecificEpithet, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","150, 152"
109
originalInfraspecificEpithet,,"http://rs.tdwg.org/dwc/terms/#infraspecificEpithet, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",150
110 110
institutionCode,,http://rs.tdwg.org/dwc/terms/#institutionCode,11
111 111
institutionID,,http://rs.tdwg.org/dwc/terms/#institutionID,8
112 112
island,,http://rs.tdwg.org/dwc/terms/#island,62
113 113
islandGroup,,http://rs.tdwg.org/dwc/terms/#islandGroup,61
114 114
kingdom,,http://rs.tdwg.org/dwc/terms/#kingdom,142
115
verbatimKingdom,,"http://rs.tdwg.org/dwc/terms/#kingdom, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","142, 152"
115
originalKingdom,,"http://rs.tdwg.org/dwc/terms/#kingdom, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",142
116 116
latestAgeOrHighestStage,,http://rs.tdwg.org/dwc/terms/#latestAgeOrHighestStage,110
117 117
latestEonOrHighestEonothem,,http://rs.tdwg.org/dwc/terms/#latestEonOrHighestEonothem,102
118 118
latestEpochOrHighestSeries,,http://rs.tdwg.org/dwc/terms/#latestEpochOrHighestSeries,108
......
155 155
occurrenceRemarks,,http://rs.tdwg.org/dwc/terms/#occurrenceRemarks,21
156 156
occurrenceStatus,,http://rs.tdwg.org/dwc/terms/#occurrenceStatus,31
157 157
order,,http://rs.tdwg.org/dwc/terms/#order,145
158
verbatimOrder,,"http://rs.tdwg.org/dwc/terms/#order, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","145, 152"
158
originalOrder,,"http://rs.tdwg.org/dwc/terms/#order, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",145
159 159
originalNameUsage,,http://rs.tdwg.org/dwc/terms/#originalNameUsage,137
160 160
originalNameUsageID,,http://rs.tdwg.org/dwc/terms/#originalNameUsageID,130
161 161
otherCatalogNumbers,,http://rs.tdwg.org/dwc/terms/#otherCatalogNumbers,34
......
163 163
parentNameUsage,,http://rs.tdwg.org/dwc/terms/#parentNameUsage,136
164 164
parentNameUsageID,,http://rs.tdwg.org/dwc/terms/#parentNameUsageID,129
165 165
phylum,,http://rs.tdwg.org/dwc/terms/#phylum,143
166
verbatimPhylum,,"http://rs.tdwg.org/dwc/terms/#phylum, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","143, 152"
166
originalPhylum,,"http://rs.tdwg.org/dwc/terms/#phylum, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",143
167 167
pointRadiusSpatialFit,,http://rs.tdwg.org/dwc/terms/#pointRadiusSpatialFit,90
168 168
preparations,,http://rs.tdwg.org/dwc/terms/#preparations,32
169 169
previousIdentifications,,http://rs.tdwg.org/dwc/terms/#previousIdentifications,35
......
183 183
samplingProtocol,,http://rs.tdwg.org/dwc/terms/#samplingProtocol,42
184 184
scientificName,,http://rs.tdwg.org/dwc/terms/#scientificName,134
185 185
scientificNameWithAuthorship,,"http://rs.tdwg.org/dwc/terms/#scientificName, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship","134, 153"
186
verbatimScientificNameWithAuthorship,,"http://rs.tdwg.org/dwc/terms/#scientificName, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","134, 153, 152"
187
verbatimScientificName,,"http://rs.tdwg.org/dwc/terms/#scientificName, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","134, 152"
186
originalScientificNameWithAuthorship,,"http://rs.tdwg.org/dwc/terms/#scientificName, http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species","134, 153"
187
originalScientificName,,"http://rs.tdwg.org/dwc/terms/#scientificName, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",134
188 188
scientificNameAuthorship,,http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship,153
189
verbatimScientificNameAuthorship,,"http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","153, 152"
189
originalScientificNameAuthorship,,"http://rs.tdwg.org/dwc/terms/#scientificNameAuthorship, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",153
190 190
scientificNameID,,http://rs.tdwg.org/dwc/terms/#scientificNameID,127
191 191
sex,,http://rs.tdwg.org/dwc/terms/#sex,26
192 192
specificEpithet,,http://rs.tdwg.org/dwc/terms/#specificEpithet,149
193
verbatimSpecificEpithet,,"http://rs.tdwg.org/dwc/terms/#specificEpithet, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","149, 152"
193
originalSpecificEpithet,,"http://rs.tdwg.org/dwc/terms/#specificEpithet, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",149
194 194
startDayOfYear,,http://rs.tdwg.org/dwc/terms/#startDayOfYear,46
195 195
stateProvince,,http://rs.tdwg.org/dwc/terms/#stateProvince,65
196 196
subgenus,,http://rs.tdwg.org/dwc/terms/#subgenus,148
197
verbatimSubgenus,,"http://rs.tdwg.org/dwc/terms/#subgenus, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank","148, 152"
197
verbatimSubgenus,,"http://rs.tdwg.org/dwc/terms/#subgenus, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",148
198 198
taxonConceptID,,http://rs.tdwg.org/dwc/terms/#taxonConceptID,133
199 199
taxonID,,http://rs.tdwg.org/dwc/terms/#taxonID,126
200 200
taxonRank,,http://rs.tdwg.org/dwc/terms/#taxonRank,151
......
211 211
verbatimLocality,,http://rs.tdwg.org/dwc/terms/#verbatimLocality,69
212 212
verbatimLongitude,,http://rs.tdwg.org/dwc/terms/#verbatimLongitude,82
213 213
verbatimSRS,,http://rs.tdwg.org/dwc/terms/#verbatimSRS,84
214
verbatimTaxonRank,,http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank,152
214
originalTaxonRank,,http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank,152
215 215
vernacularName,,http://rs.tdwg.org/dwc/terms/#vernacularName,154
216 216
waterBody,,http://rs.tdwg.org/dwc/terms/#waterBody,60
217 217
year,,http://rs.tdwg.org/dwc/terms/#year,48
......
260 260
stemCount,,http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=stemcount&entity=dba_tabledescription&where=where_tablename#stemCount,6
261 261
taxonOccurrenceID,,"http://vegbank.org/vegbank/views/dba_tabledescription_detail.jsp?view=detail&wparam=taxonobservation&entity=dba_tabledescription&where=where_tablename, http://rs.tdwg.org/dwc/terms/#occurrenceID",", 0"
262 262
forma,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/fm, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany",
263
verbatimVariety,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/fm, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank",
263
originalVariety,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/fm, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",
264 264
variety,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/var, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany",
265
verbatimForma,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/var, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank",
265
originalForma,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankBelowSubspeciesEnum/var, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",
266 266
cultivar,,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankCultivatedPlants/cv,
267
verbatimCultivar,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankCultivatedPlants/cv, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank",
267
originalCultivar,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankCultivatedPlants/cv, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",
268 268
subspecies,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankSpeciesGroupEnum/ssp, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany",
269
verbatimSubspecies,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankSpeciesGroupEnum/ssp, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://rs.tdwg.org/dwc/terms/#verbatimTaxonRank",
269
originalSubspecies,,"http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/tcsv101.xsd#/TaxonomicRankSpeciesGroupEnum/ssp, http://en.wikipedia.org/wiki/Taxonomic_rank#Ranks_in_botany, http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.orig_species",
270 270
magnesium_fraction,Added units,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
271 271
magnesium_percent,Added units,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/magnesium,4
272 272
nitrogen_fraction,Added units,http://wiki.tdwg.org/twiki/pub/Vegetation/WebHome/VegX_Schema_1.5.3_proposed.zip#/veg.xsd#/abioticObservations/abioticObservation/nitrogen,5
mappings/for_review/VegCore-VegBIEN.csv
113 113
locationID,"//taxonoccurrence/authortaxoncode/_if[@name=""if is organism""]/cond/_exists",
114 114
plotName,"//taxonoccurrence/authortaxoncode/_if[@name=""if is organism""]/cond/_exists",
115 115
tag,"//taxonoccurrence/authortaxoncode/_if[@name=""if is organism""]/then",
116
verbatimScientificName,//taxonoccurrence/authortaxoncode,
116
originalScientificName,//taxonoccurrence/authortaxoncode,
117 117
scientificNameWithAuthorship,//taxonoccurrence/authortaxoncode,
118 118
scientificName,//taxonoccurrence/authortaxoncode,
119 119
growthForm,//taxonoccurrence/growthform,
......
161 161
yearIdentified,//taxonoccurrence/taxondetermination[]/determinationdate,
162 162
taxonRemarks,//taxonoccurrence/taxondetermination[]/notes,
163 163
identificationQualifier,//taxonoccurrence/taxondetermination[]/taxonfit,
164
verbatimScientificNameAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
165
verbatimClass,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
166
verbatimCultivar,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/cultivar,
167
verbatimFamily,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
168
verbatimForma,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/forma,
169
verbatimGenus,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
170
verbatimKingdom,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
171
verbatimOrder,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
172
verbatimPhylum,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
173
verbatimSpecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
174
verbatimSubspecies,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
175
verbatimTaxonRank,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
176
verbatimInfraspecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
177
verbatimScientificName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname,
178
verbatimScientificNameWithAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
179
verbatimScientificName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
180
verbatimFamily,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
181
verbatimGenus,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
182
verbatimSpecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
183
verbatimSubspecies,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
184
verbatimTaxonRank,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
185
verbatimInfraspecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
186
verbatimVariety,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
187
verbatimForma,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
188
verbatimCultivar,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
189
verbatimScientificNameAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
190
verbatimVariety,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/variety,
191
verbatimIdentificationQualifier,//taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
164
originalScientificNameAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/author,
165
originalClass,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/class,
166
originalCultivar,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/cultivar,
167
originalFamily,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
168
originalForma,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/forma,
169
originalGenus,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,
170
originalKingdom,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/kingdom,
171
originalOrder,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/order,
172
originalPhylum,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/phylum,
173
originalSpecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,
174
originalSubspecies,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
175
originalTaxonRank,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
176
originalInfraspecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/subspecies,
177
originalScientificName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname,
178
originalScientificNameWithAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
179
originalScientificName,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
180
originalFamily,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
181
originalGenus,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
182
originalSpecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
183
originalSubspecies,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
184
originalTaxonRank,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
185
originalInfraspecificEpithet,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
186
originalVariety,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
187
originalForma,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
188
originalCultivar,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
189
originalScientificNameAuthorship,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor,
190
originalVariety,//taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/variety,
191
originalIdentificationQualifier,//taxonoccurrence/taxondetermination[isoriginal=true]/taxonfit,
192 192
recordedBy,//taxonoccurrence/verbatimcollectorname,
193 193
recordedBy.givenName,//taxonoccurrence/verbatimcollectorname,
194 194
recordedBy.surName,//taxonoccurrence/verbatimcollectorname,

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