Revision 5137
Added by Aaron Marcuse-Kubitza about 12 years ago
| inputs/FIA/Organism/VegBIEN.csv | ||
|---|---|---|
| 15 | 15 |
PlotCD,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/cond/_exists", |
| 16 | 16 |
TreeTag,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/1/_first/2/_if[@name=""if is organism""]/then", |
| 17 | 17 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 18 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 19 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 18 | 20 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 19 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 20 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 21 | 21 |
County,/location/locationplace/*_id/placepath/county, |
| 22 | 22 |
StateProvince,/location/locationplace/*_id/placepath/stateprovince, |
| 23 | 23 |
HOM,,** No join mapping for *HOM ** |
| inputs/SALVIAS/plotObservations/VegBIEN.csv | ||
|---|---|---|
| 60 | 60 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author,Brad: This is the author of the scientificName. |
| 61 | 61 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 62 | 62 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 63 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 64 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 65 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 66 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 67 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 68 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 69 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2,Brad: This is the author of the scientificName. |
|
| 63 | 70 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 64 | 71 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 65 | 72 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 66 | 73 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 67 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 68 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 69 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 70 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 71 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 72 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 73 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2,Brad: This is the author of the scientificName. |
|
| 74 | 74 |
cfaff,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
| 75 | 75 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,Brad: OMIT |
| 76 | 76 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus, |
| 77 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT |
|
| 78 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 79 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT |
|
| 77 | 80 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,Brad: OMIT |
| 78 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT |
|
| 79 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 80 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT |
|
| 81 | 81 |
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/1,Brad: See comment above |
| 82 | 82 |
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/2,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick." |
| 83 | 83 |
DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
| inputs/.TNRS/tnrs/VegBIEN.csv | ||
|---|---|---|
| 5 | 5 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 6 | 6 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/author, |
| 7 | 7 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/family, |
| 8 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 9 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 10 |
Accepted_name_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 11 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 8 | 12 |
Accepted_name_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 9 | 13 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/taxonomicname, |
| 10 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 11 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 12 |
Accepted_name_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 13 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[canon_taxonpath_id=0]/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 14 | 14 |
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,Contains any family in original string (uncommon) |
| 15 | 15 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 16 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/1, |
|
| 17 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 18 |
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,Contains any family in original string (uncommon) |
|
| 19 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 20 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 21 |
Infraspecific_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 22 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 23 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 24 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 16 | 25 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 17 | 26 |
Infraspecific_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 18 | 27 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 19 | 28 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 20 | 29 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 21 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/1, |
|
| 22 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 23 |
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,Contains any family in original string (uncommon) |
|
| 24 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 25 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 26 |
Infraspecific_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 27 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 28 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 29 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 30 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor, |
|
| 30 | 31 |
Accepted_name_lsid,,** No non-empty join mapping for OMIT ** |
| 31 | 32 |
Accepted_name_species,,** No non-empty join mapping for OMIT ** Also contains genus. Omitted because Accepted_name contains more info. |
| 32 | 33 |
Accepted_name_url,,** No non-empty join mapping for OMIT ** |
| inputs/U/Specimen/VegBIEN.csv | ||
|---|---|---|
| 18 | 18 |
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last, |
| 19 | 19 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 20 | 20 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 21 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 22 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
| 21 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 22 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
| 23 | 23 |
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
| 24 | 24 |
cf,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 25 | 25 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join/1, |
| inputs/ARIZ/Specimen/VegBIEN.csv | ||
|---|---|---|
| 36 | 36 |
Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class, |
| 37 | 37 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 38 | 38 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 39 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/1,Contains the binomial in addition to the authority |
|
| 40 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 41 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 42 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 43 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 44 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 39 | 45 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 40 | 46 |
Order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order, |
| 41 | 47 |
Phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum, |
| 42 | 48 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 43 | 49 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 44 | 50 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 45 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/1,Contains the binomial in addition to the authority |
|
| 46 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 47 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 48 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 49 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 50 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 51 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor,Contains the binomial in addition to the authority |
|
| 51 | 52 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
| 52 | 53 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
| 53 | 54 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/GBIF/Specimen/test.xml.ref | ||
|---|---|---|
| 59 | 59 |
<author>$AuthorOfScientificName</author> |
| 60 | 60 |
<family>$Family</family> |
| 61 | 61 |
<genus>$Genus</genus> |
| 62 |
<species>$SpecificEpithet</species> |
|
| 63 |
<subspecies>$InfraspecificEpithet</subspecies> |
|
| 64 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 65 |
<taxonomicnamewithauthor> |
|
| 62 |
<identifyingtaxonomicname> |
|
| 66 | 63 |
<_join_words> |
| 67 | 64 |
<1> |
| 68 | 65 |
<_alt> |
| ... | ... | |
| 79 | 76 |
</1> |
| 80 | 77 |
<2>$AuthorOfScientificName</2> |
| 81 | 78 |
</_join_words> |
| 82 |
</taxonomicnamewithauthor> |
|
| 79 |
</identifyingtaxonomicname> |
|
| 80 |
<species>$SpecificEpithet</species> |
|
| 81 |
<subspecies>$InfraspecificEpithet</subspecies> |
|
| 82 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 83 | 83 |
</taxonpath> |
| 84 | 84 |
</taxonpath_id> |
| 85 | 85 |
</taxondetermination> |
| ... | ... | |
| 89 | 89 |
<taxonpath> |
| 90 | 90 |
<family>$GBIFFamilyOriginal</family> |
| 91 | 91 |
<genus>$GBIFGenusOriginal</genus> |
| 92 |
<taxonomicname>$ScientificNameOriginal</taxonomicname> |
|
| 93 |
<taxonomicnamewithauthor> |
|
| 92 |
<identifyingtaxonomicname> |
|
| 94 | 93 |
<_alt> |
| 95 | 94 |
<1>$ScientificNameOriginal</1> |
| 96 | 95 |
<2> |
| ... | ... | |
| 100 | 99 |
</_join_words> |
| 101 | 100 |
</2> |
| 102 | 101 |
</_alt> |
| 103 |
</taxonomicnamewithauthor> |
|
| 102 |
</identifyingtaxonomicname> |
|
| 103 |
<taxonomicname>$ScientificNameOriginal</taxonomicname> |
|
| 104 | 104 |
</taxonpath> |
| 105 | 105 |
</taxonpath_id> |
| 106 | 106 |
</taxondetermination> |
| inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
|---|---|---|
| 114 | 114 |
conceptual_darwin_2003_1_0_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 115 | 115 |
dwc_dwcore_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 116 | 116 |
dwc_terms_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 117 |
conceptual_darwin_2003_1_0_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 118 |
dwc_dwcore_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 119 |
dwc_terms_scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 120 |
conceptual_darwin_2003_1_0_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 121 |
dwc_dwcore_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 122 |
dwc_terms_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 123 |
conceptual_darwin_2003_1_0_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 124 |
dwc_dwcore_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 125 |
dwc_terms_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 126 |
conceptual_darwin_2003_1_0_Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 127 |
dwc_dwcore_SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 128 |
dwc_terms_specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 129 |
conceptual_darwin_2003_1_0_Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 130 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 131 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 132 |
dwc_dwcore_InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 133 |
dwc_terms_infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 134 |
dwc_terms_scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/1, |
|
| 135 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/2, |
|
| 136 |
dwc_dwcore_AuthorYearOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/3, |
|
| 117 | 137 |
conceptual_darwin_2003_1_0_Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 118 | 138 |
dwc_dwcore_Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 119 | 139 |
dwc_terms_kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| ... | ... | |
| 134 | 154 |
conceptual_darwin_2003_1_0_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 135 | 155 |
dwc_dwcore_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 136 | 156 |
dwc_terms_scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 137 |
conceptual_darwin_2003_1_0_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 138 |
dwc_dwcore_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 139 |
dwc_terms_scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 140 |
conceptual_darwin_2003_1_0_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 141 |
dwc_dwcore_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 142 |
dwc_terms_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 143 |
conceptual_darwin_2003_1_0_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 144 |
dwc_dwcore_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 145 |
dwc_terms_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 146 |
conceptual_darwin_2003_1_0_Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 147 |
dwc_dwcore_SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 148 |
dwc_terms_specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 149 |
conceptual_darwin_2003_1_0_Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 150 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 151 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 152 |
dwc_dwcore_InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 153 |
dwc_terms_infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 154 |
dwc_terms_scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2/_alt/1, |
|
| 155 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2/_alt/2, |
|
| 156 |
dwc_dwcore_AuthorYearOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2/_alt/3, |
|
| 157 | 157 |
dwc_terms_dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value, |
| 158 | 158 |
conceptual_darwin_2003_1_0_DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
| 159 | 159 |
conceptual_darwin_2003_1_0_MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
| inputs/MT/Specimen/VegBIEN.csv | ||
|---|---|---|
| 13 | 13 |
id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3, |
| 14 | 14 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 15 | 15 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 16 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 17 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
| 16 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 17 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
| 18 | 18 |
locality,/location/locationnarrative/_merge/1, |
| 19 | 19 |
continent,/location/locationplace/*_id/placepath/continent, |
| 20 | 20 |
basisOfRecord,,** No join mapping for basisOfRecord ** |
| inputs/MT/Specimen/test.xml.ref | ||
|---|---|---|
| 44 | 44 |
<taxonpath> |
| 45 | 45 |
<family>$family</family> |
| 46 | 46 |
<genus>$genus</genus> |
| 47 |
<taxonomicnamewithauthor>
|
|
| 47 |
<identifyingtaxonomicname>
|
|
| 48 | 48 |
<_join_words> |
| 49 | 49 |
<1>$family</1> |
| 50 | 50 |
<2>$genus</2> |
| 51 | 51 |
</_join_words> |
| 52 |
</taxonomicnamewithauthor>
|
|
| 52 |
</identifyingtaxonomicname>
|
|
| 53 | 53 |
</taxonpath> |
| 54 | 54 |
</taxonpath_id> |
| 55 | 55 |
</taxondetermination> |
| inputs/XAL/Specimen/VegBIEN.csv | ||
|---|---|---|
| 27 | 27 |
darwin:Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class, |
| 28 | 28 |
darwin:Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 29 | 29 |
darwin:Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 30 |
darwin:ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 31 |
darwin:Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 32 |
darwin:Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 33 |
darwin:Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 34 |
darwin:Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 35 |
darwin:ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 30 | 36 |
darwin:Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 31 | 37 |
darwin:Order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order, |
| 32 | 38 |
darwin:Phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum, |
| 33 | 39 |
darwin:Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 34 | 40 |
darwin:Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 35 | 41 |
darwin:ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 36 |
darwin:ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 37 |
darwin:Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 38 |
darwin:Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 39 |
darwin:Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 40 |
darwin:Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 41 |
darwin:ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 42 | 42 |
darwin:DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
| 43 | 43 |
darwin:MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
| 44 | 44 |
darwin:YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/TEAM/VL/VegBIEN.csv | ||
|---|---|---|
| 22 | 22 |
Id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3, |
| 23 | 23 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 24 | 24 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 25 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 26 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 27 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 25 | 28 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 28 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 29 | 29 |
Names of Collectors,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 30 | 30 |
Comments,,** No join mapping for *Comments ** |
| 31 | 31 |
Condition Codes,,** No join mapping for *Condition Codes ** |
| inputs/TEAM/VL/test.xml.ref | ||
|---|---|---|
| 46 | 46 |
<taxonpath> |
| 47 | 47 |
<family>$Family</family> |
| 48 | 48 |
<genus>$Genus</genus> |
| 49 |
<species>$Species</species> |
|
| 50 |
<taxonomicnamewithauthor> |
|
| 49 |
<identifyingtaxonomicname> |
|
| 51 | 50 |
<_join_words> |
| 52 | 51 |
<1>$Family</1> |
| 53 | 52 |
<2>$Genus</2> |
| 54 | 53 |
<3>$Species</3> |
| 55 | 54 |
</_join_words> |
| 56 |
</taxonomicnamewithauthor> |
|
| 55 |
</identifyingtaxonomicname> |
|
| 56 |
<species>$Species</species> |
|
| 57 | 57 |
</taxonpath> |
| 58 | 58 |
</taxonpath_id> |
| 59 | 59 |
</taxondetermination> |
| inputs/TEAM/VT/VegBIEN.csv | ||
|---|---|---|
| 22 | 22 |
Id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3, |
| 23 | 23 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 24 | 24 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 25 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 26 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 27 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 25 | 28 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 28 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 29 | 29 |
Names of Collectors,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 30 | 30 |
Comments,,** No join mapping for *Comments ** |
| 31 | 31 |
Condition Codes,,** No join mapping for *Condition Codes ** |
| inputs/TEAM/VT/test.xml.ref | ||
|---|---|---|
| 46 | 46 |
<taxonpath> |
| 47 | 47 |
<family>$Family</family> |
| 48 | 48 |
<genus>$Genus</genus> |
| 49 |
<species>$Species</species> |
|
| 50 |
<taxonomicnamewithauthor> |
|
| 49 |
<identifyingtaxonomicname> |
|
| 51 | 50 |
<_join_words> |
| 52 | 51 |
<1>$Family</1> |
| 53 | 52 |
<2>$Genus</2> |
| 54 | 53 |
<3>$Species</3> |
| 55 | 54 |
</_join_words> |
| 56 |
</taxonomicnamewithauthor> |
|
| 55 |
</identifyingtaxonomicname> |
|
| 56 |
<species>$Species</species> |
|
| 57 | 57 |
</taxonpath> |
| 58 | 58 |
</taxonpath_id> |
| 59 | 59 |
</taxondetermination> |
| inputs/NY/Specimen/VegBIEN.csv | ||
|---|---|---|
| 32 | 32 |
Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class, |
| 33 | 33 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 34 | 34 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 35 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 36 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 37 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 38 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 39 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 40 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 35 | 41 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 36 | 42 |
Order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order, |
| 37 | 43 |
Phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum, |
| 38 | 44 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 39 | 45 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 40 | 46 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 41 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 42 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 43 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 44 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 45 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 46 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 47 | 47 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
| 48 | 48 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
| 49 | 49 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
| inputs/NY/Specimen/test.xml.ref | ||
|---|---|---|
| 120 | 120 |
<class>$Class</class> |
| 121 | 121 |
<family>$Family</family> |
| 122 | 122 |
<genus>$Genus</genus> |
| 123 |
<kingdom>$Kingdom</kingdom> |
|
| 124 |
<order>$Order</order> |
|
| 125 |
<phylum>$Phylum</phylum> |
|
| 126 |
<species>$Species</species> |
|
| 127 |
<subspecies>$Subspecies</subspecies> |
|
| 128 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 129 |
<taxonomicnamewithauthor> |
|
| 123 |
<identifyingtaxonomicname> |
|
| 130 | 124 |
<_join_words> |
| 131 | 125 |
<1> |
| 132 | 126 |
<_alt> |
| ... | ... | |
| 143 | 137 |
</1> |
| 144 | 138 |
<2>$ScientificNameAuthor</2> |
| 145 | 139 |
</_join_words> |
| 146 |
</taxonomicnamewithauthor> |
|
| 140 |
</identifyingtaxonomicname> |
|
| 141 |
<kingdom>$Kingdom</kingdom> |
|
| 142 |
<order>$Order</order> |
|
| 143 |
<phylum>$Phylum</phylum> |
|
| 144 |
<species>$Species</species> |
|
| 145 |
<subspecies>$Subspecies</subspecies> |
|
| 146 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 147 | 147 |
</taxonpath> |
| 148 | 148 |
</taxonpath_id> |
| 149 | 149 |
<determinationdate> |
| inputs/Madidi/Organism/VegBIEN.csv | ||
|---|---|---|
| 36 | 36 |
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 37 | 37 |
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 38 | 38 |
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 39 |
Specie+autor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/1, |
|
| 40 |
Species and morphotypes,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,"Contains less than ""Specie+autor""" |
|
| 41 |
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 42 |
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 43 |
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 44 |
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 39 | 45 |
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 40 | 46 |
Species and morphotypes,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname,"Contains less than ""Specie+autor""" |
| 41 |
Specie+autor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/1, |
|
| 42 |
Species and morphotypes,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1,"Contains less than ""Specie+autor""" |
|
| 43 |
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 44 |
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 45 |
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 46 |
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 47 |
Specie+autor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor, |
|
| 47 | 48 |
Qualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
| 48 | 49 |
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family, |
| 49 | 50 |
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,Often = Genera |
| 50 |
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 51 |
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2,Often = Genera
|
|
| 51 |
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
| 52 |
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,Often = Genera
|
|
| 52 | 53 |
Index collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 53 | 54 |
Specimen,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 54 | 55 |
Basal area,,"** No join mapping for *Basal area ** Would be basalDiameter, but need formula to translate" |
| inputs/Madidi/Organism/test.xml.ref | ||
|---|---|---|
| 73 | 73 |
<author>$Autor (revised)</author> |
| 74 | 74 |
<family>$Family (revised)</family> |
| 75 | 75 |
<genus>$Genera</genus> |
| 76 |
<species>$Specific epithet</species> |
|
| 77 |
<taxonomicname>$Species and morphotypes</taxonomicname> |
|
| 78 |
<taxonomicnamewithauthor> |
|
| 76 |
<identifyingtaxonomicname> |
|
| 79 | 77 |
<_alt> |
| 80 | 78 |
<1>$Specie+autor</1> |
| 81 | 79 |
<2> |
| ... | ... | |
| 96 | 94 |
</_join_words> |
| 97 | 95 |
</2> |
| 98 | 96 |
</_alt> |
| 99 |
</taxonomicnamewithauthor> |
|
| 97 |
</identifyingtaxonomicname> |
|
| 98 |
<species>$Specific epithet</species> |
|
| 99 |
<taxonomicname>$Species and morphotypes</taxonomicname> |
|
| 100 |
<taxonomicnamewithauthor>$Specie+autor</taxonomicnamewithauthor> |
|
| 100 | 101 |
</taxonpath> |
| 101 | 102 |
</taxonpath_id> |
| 102 | 103 |
<taxonfit>$Qualifier</taxonfit> |
| ... | ... | |
| 107 | 108 |
<taxonpath> |
| 108 | 109 |
<family>$Field family</family> |
| 109 | 110 |
<genus>$Field name</genus> |
| 110 |
<taxonomicnamewithauthor>
|
|
| 111 |
<identifyingtaxonomicname>
|
|
| 111 | 112 |
<_join_words> |
| 112 | 113 |
<1>$Field family</1> |
| 113 | 114 |
<2>$Field name</2> |
| 114 | 115 |
</_join_words> |
| 115 |
</taxonomicnamewithauthor>
|
|
| 116 |
</identifyingtaxonomicname>
|
|
| 116 | 117 |
</taxonpath> |
| 117 | 118 |
</taxonpath_id> |
| 118 | 119 |
</taxondetermination> |
| inputs/UNCC/Specimen/VegBIEN.csv | ||
|---|---|---|
| 45 | 45 |
authors,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 46 | 46 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 47 | 47 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 48 |
SciName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 49 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 50 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 51 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 52 |
infraname,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 53 |
usdaRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/1", |
|
| 54 |
infrarank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/2", |
|
| 55 |
infraname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 56 |
authors,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 48 | 57 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 49 | 58 |
infraname,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 50 | 59 |
usdaRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/1", |
| 51 | 60 |
infrarank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/2", |
| 52 | 61 |
infraname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 53 | 62 |
SciName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 54 |
SciName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 55 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 56 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 57 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 58 |
infraname,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 59 |
usdaRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/1", |
|
| 60 |
infrarank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then/_alt/2", |
|
| 61 |
infraname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 62 |
authors,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 63 | 63 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join/1, |
| 64 | 64 |
collector1,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join/2, |
| 65 | 65 |
collector2,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join/3, |
| inputs/UNCC/Specimen/test.xml.ref | ||
|---|---|---|
| 76 | 76 |
<author>$authors</author> |
| 77 | 77 |
<family>$family</family> |
| 78 | 78 |
<genus>$genus</genus> |
| 79 |
<species>$species</species> |
|
| 80 |
<subspecies> |
|
| 79 |
<identifyingtaxonomicname> |
|
| 81 | 80 |
<_join_words> |
| 82 | 81 |
<1> |
| 83 |
<_if name="if has infraspecificEpithet"> |
|
| 84 |
<cond>$infraname</cond> |
|
| 85 |
<then> |
|
| 86 |
<_alt> |
|
| 87 |
<1>$usdaRank</1> |
|
| 88 |
<2>$infrarank</2> |
|
| 89 |
</_alt> |
|
| 90 |
</then> |
|
| 91 |
</_if> |
|
| 92 |
</1> |
|
| 93 |
<2>$infraname</2> |
|
| 94 |
</_join_words> |
|
| 95 |
</subspecies> |
|
| 96 |
<taxonomicname>$SciName</taxonomicname> |
|
| 97 |
<taxonomicnamewithauthor> |
|
| 98 |
<_join_words> |
|
| 99 |
<1> |
|
| 100 | 82 |
<_alt> |
| 101 | 83 |
<1>$SciName</1> |
| 102 | 84 |
<2> |
| ... | ... | |
| 126 | 108 |
</1> |
| 127 | 109 |
<2>$authors</2> |
| 128 | 110 |
</_join_words> |
| 129 |
</taxonomicnamewithauthor> |
|
| 111 |
</identifyingtaxonomicname> |
|
| 112 |
<species>$species</species> |
|
| 113 |
<subspecies> |
|
| 114 |
<_join_words> |
|
| 115 |
<1> |
|
| 116 |
<_if name="if has infraspecificEpithet"> |
|
| 117 |
<cond>$infraname</cond> |
|
| 118 |
<then> |
|
| 119 |
<_alt> |
|
| 120 |
<1>$usdaRank</1> |
|
| 121 |
<2>$infrarank</2> |
|
| 122 |
</_alt> |
|
| 123 |
</then> |
|
| 124 |
</_if> |
|
| 125 |
</1> |
|
| 126 |
<2>$infraname</2> |
|
| 127 |
</_join_words> |
|
| 128 |
</subspecies> |
|
| 129 |
<taxonomicname>$SciName</taxonomicname> |
|
| 130 | 130 |
</taxonpath> |
| 131 | 131 |
</taxonpath_id> |
| 132 | 132 |
</taxondetermination> |
| inputs/ACAD/Specimen/VegBIEN.csv | ||
|---|---|---|
| 27 | 27 |
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/class, |
| 28 | 28 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 29 | 29 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 30 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/1, |
|
| 31 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 32 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 33 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 34 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 35 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 36 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 37 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 30 | 38 |
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 31 | 39 |
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/order, |
| 32 | 40 |
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/phylum, |
| ... | ... | |
| 34 | 42 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 35 | 43 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 36 | 44 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 37 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/1, |
|
| 38 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 39 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 40 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 41 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 42 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 43 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 44 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 45 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor, |
|
| 45 | 46 |
dateIdentified,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_*/date/_dateRangeStart/value, |
| 46 | 47 |
recordedBy,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 47 | 48 |
catalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| inputs/ACAD/Specimen/test.xml.ref | ||
|---|---|---|
| 80 | 80 |
<class>$class</class> |
| 81 | 81 |
<family>$family</family> |
| 82 | 82 |
<genus>$genus</genus> |
| 83 |
<kingdom>$kingdom</kingdom> |
|
| 84 |
<order>$order</order> |
|
| 85 |
<phylum>$phylum</phylum> |
|
| 86 |
<species>$specificEpithet</species> |
|
| 87 |
<subspecies> |
|
| 88 |
<_join_words> |
|
| 89 |
<1> |
|
| 90 |
<_if name="if has infraspecificEpithet"> |
|
| 91 |
<cond>$infraspecificEpithet</cond> |
|
| 92 |
<then>$taxonRank</then> |
|
| 93 |
</_if> |
|
| 94 |
</1> |
|
| 95 |
<2>$infraspecificEpithet</2> |
|
| 96 |
</_join_words> |
|
| 97 |
</subspecies> |
|
| 98 |
<taxonomicnamewithauthor> |
|
| 83 |
<identifyingtaxonomicname> |
|
| 99 | 84 |
<_alt> |
| 100 | 85 |
<1>$scientificName</1> |
| 101 | 86 |
<2> |
| ... | ... | |
| 122 | 107 |
</_join_words> |
| 123 | 108 |
</2> |
| 124 | 109 |
</_alt> |
| 125 |
</taxonomicnamewithauthor> |
|
| 110 |
</identifyingtaxonomicname> |
|
| 111 |
<kingdom>$kingdom</kingdom> |
|
| 112 |
<order>$order</order> |
|
| 113 |
<phylum>$phylum</phylum> |
|
| 114 |
<species>$specificEpithet</species> |
|
| 115 |
<subspecies> |
|
| 116 |
<_join_words> |
|
| 117 |
<1> |
|
| 118 |
<_if name="if has infraspecificEpithet"> |
|
| 119 |
<cond>$infraspecificEpithet</cond> |
|
| 120 |
<then>$taxonRank</then> |
|
| 121 |
</_if> |
|
| 122 |
</1> |
|
| 123 |
<2>$infraspecificEpithet</2> |
|
| 124 |
</_join_words> |
|
| 125 |
</subspecies> |
|
| 126 |
<taxonomicnamewithauthor>$scientificName</taxonomicnamewithauthor> |
|
| 126 | 127 |
</taxonpath> |
| 127 | 128 |
</taxonpath_id> |
| 128 | 129 |
<determinationdate><_date><date><_dateRangeStart><value>$dateIdentified</value></_dateRangeStart></date></_date></determinationdate> |
| inputs/SALVIAS-CSV/Organism/VegBIEN.csv | ||
|---|---|---|
| 67 | 67 |
specific_authority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author,Brad: This is the author of the scientificName. |
| 68 | 68 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 69 | 69 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 70 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 71 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 72 |
specific_epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 73 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 74 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 75 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 76 |
specific_authority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2,Brad: This is the author of the scientificName. |
|
| 70 | 77 |
specific_epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 71 | 78 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 72 | 79 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 73 | 80 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 74 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 75 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 76 |
specific_epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 77 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 78 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
|
| 79 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 80 |
specific_authority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2,Brad: This is the author of the scientificName. |
|
| 81 | 81 |
cf_aff,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
| 82 | 82 |
orig_family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,Brad: OMIT |
| 83 |
orig_family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT |
|
| 84 |
orig_species,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT |
|
| 83 | 85 |
orig_species,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/species,Brad: OMIT |
| 84 |
orig_family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT |
|
| 85 |
orig_species,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT |
|
| 86 | 86 |
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/1,Brad: See comment above |
| 87 | 87 |
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/2,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick." |
| 88 | 88 |
det_type,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
| inputs/SALVIAS-CSV/Organism/test.xml.ref | ||
|---|---|---|
| 150 | 150 |
<author>$specific_authority</author> |
| 151 | 151 |
<family>$family</family> |
| 152 | 152 |
<genus>$genus</genus> |
| 153 |
<species>$specific_epithet</species> |
|
| 154 |
<subspecies> |
|
| 153 |
<identifyingtaxonomicname> |
|
| 155 | 154 |
<_join_words> |
| 156 | 155 |
<1> |
| 157 |
<_if name="if has infraspecificEpithet"> |
|
| 158 |
<cond>$infra_ep_1</cond> |
|
| 159 |
<then>$infra_rank_1</then> |
|
| 160 |
</_if> |
|
| 161 |
</1> |
|
| 162 |
<2>$infra_ep_1</2> |
|
| 163 |
</_join_words> |
|
| 164 |
</subspecies> |
|
| 165 |
<taxonomicnamewithauthor> |
|
| 166 |
<_join_words> |
|
| 167 |
<1> |
|
| 168 | 156 |
<_join_words> |
| 169 | 157 |
<1>$family</1> |
| 170 | 158 |
<2>$genus</2> |
| ... | ... | |
| 184 | 172 |
</1> |
| 185 | 173 |
<2>$specific_authority</2> |
| 186 | 174 |
</_join_words> |
| 187 |
</taxonomicnamewithauthor> |
|
| 175 |
</identifyingtaxonomicname> |
|
| 176 |
<species>$specific_epithet</species> |
|
| 177 |
<subspecies> |
|
| 178 |
<_join_words> |
|
| 179 |
<1> |
|
| 180 |
<_if name="if has infraspecificEpithet"> |
|
| 181 |
<cond>$infra_ep_1</cond> |
|
| 182 |
<then>$infra_rank_1</then> |
|
| 183 |
</_if> |
|
| 184 |
</1> |
|
| 185 |
<2>$infra_ep_1</2> |
|
| 186 |
</_join_words> |
|
| 187 |
</subspecies> |
|
| 188 | 188 |
</taxonpath> |
| 189 | 189 |
</taxonpath_id> |
| 190 | 190 |
<taxonfit>$cf_aff</taxonfit> |
| ... | ... | |
| 194 | 194 |
<taxonpath_id> |
| 195 | 195 |
<taxonpath> |
| 196 | 196 |
<family>$orig_family</family> |
| 197 |
<species>$orig_species</species> |
|
| 198 |
<taxonomicnamewithauthor> |
|
| 197 |
<identifyingtaxonomicname> |
|
| 199 | 198 |
<_join_words> |
| 200 | 199 |
<1>$orig_family</1> |
| 201 | 200 |
<3>$orig_species</3> |
| 202 | 201 |
</_join_words> |
| 203 |
</taxonomicnamewithauthor> |
|
| 202 |
</identifyingtaxonomicname> |
|
| 203 |
<species>$orig_species</species> |
|
| 204 | 204 |
</taxonpath> |
| 205 | 205 |
</taxonpath_id> |
| 206 | 206 |
</taxondetermination> |
| ... | ... | |
| 238 | 238 |
</path> |
| 239 | 239 |
</_simplifyPath> |
| 240 | 240 |
</VegBIEN> |
| 241 |
Inserted 39 new rows into database |
|
| 241 |
Inserted 37 new rows into database |
|
| inputs/CVS/Organism/VegBIEN.csv | ||
|---|---|---|
| 9 | 9 |
obsStartDate,/location/locationevent/obsstartdate/_*/date/_alt/1, |
| 10 | 10 |
%cover,/location/locationevent/taxonoccurrence/aggregateoccurrence/cover_fraction/_percent_to_fraction/value, |
| 11 | 11 |
currentTaxonName sec Weakley 2006,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_if[@name=""if is taxonpath only""]/else/_first/3", |
| 12 |
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 12 | 13 |
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 13 |
currentTaxonName sec Weakley 2006,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 14 | 14 |
county,/location/locationplace/*_id/placepath/county, |
| 15 | 15 |
state,/location/locationplace/*_id/placepath/stateprovince, |
| 16 | 16 |
confidentialityStatus,,** No join mapping for *confidentialityStatus ** |
| inputs/CVS/Organism/test.xml.ref | ||
|---|---|---|
| 31 | 31 |
<taxondetermination> |
| 32 | 32 |
<taxonpath_id> |
| 33 | 33 |
<taxonpath> |
| 34 |
<identifyingtaxonomicname>$currentTaxonName sec Weakley 2006</identifyingtaxonomicname> |
|
| 34 | 35 |
<taxonomicname>$currentTaxonName sec Weakley 2006</taxonomicname> |
| 35 |
<taxonomicnamewithauthor>$currentTaxonName sec Weakley 2006</taxonomicnamewithauthor> |
|
| 36 | 36 |
</taxonpath> |
| 37 | 37 |
</taxonpath_id> |
| 38 | 38 |
</taxondetermination> |
| inputs/REMIB/Specimen/VegBIEN.csv | ||
|---|---|---|
| 35 | 35 |
acronym,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/party/organizationname, |
| 36 | 36 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 37 | 37 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 38 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 39 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 40 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 38 | 41 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 39 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 40 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 41 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 42 | 42 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 43 | 43 |
accession_number,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then","Not globally unique, only (usually) unique within the institution providing the data (""acronym""). Note that there are nevertheless 11,869 rows where an accession_number appears multiple times within the same institution. [1]
|
| 44 | 44 |
|
| inputs/REMIB/Specimen/test.xml.ref | ||
|---|---|---|
| 66 | 66 |
<taxonpath> |
| 67 | 67 |
<family>$family</family> |
| 68 | 68 |
<genus>$genus</genus> |
| 69 |
<species>$specificEpithet</species> |
|
| 70 |
<taxonomicnamewithauthor> |
|
| 69 |
<identifyingtaxonomicname> |
|
| 71 | 70 |
<_join_words> |
| 72 | 71 |
<1>$family</1> |
| 73 | 72 |
<2>$genus</2> |
| 74 | 73 |
<3>$specificEpithet</3> |
| 75 | 74 |
</_join_words> |
| 76 |
</taxonomicnamewithauthor> |
|
| 75 |
</identifyingtaxonomicname> |
|
| 76 |
<species>$specificEpithet</species> |
|
| 77 | 77 |
</taxonpath> |
| 78 | 78 |
</taxonpath_id> |
| 79 | 79 |
</taxondetermination> |
| inputs/CTFS/StemObservation/VegBIEN.csv | ||
|---|---|---|
| 23 | 23 |
SpeciesAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 24 | 24 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 25 | 25 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 28 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 29 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 30 |
SpeciesAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 26 | 31 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 27 | 32 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 28 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 29 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 30 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 31 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 32 |
SpeciesAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 33 | 33 |
Description,,** No join mapping for *Description ** |
| 34 | 34 |
ExactDate,,** No join mapping for *ExactDate ** |
| 35 | 35 |
FamilyID,,** No join mapping for *FamilyID ** |
| inputs/CTFS/StemObservation/test.xml.ref | ||
|---|---|---|
| 44 | 44 |
<author>$SpeciesAuthority</author> |
| 45 | 45 |
<family>$Family</family> |
| 46 | 46 |
<genus>$Genus</genus> |
| 47 |
<species>$SpeciesName</species> |
|
| 48 |
<subspecies>$SubSpeciesName</subspecies> |
|
| 49 |
<taxonomicnamewithauthor> |
|
| 47 |
<identifyingtaxonomicname> |
|
| 50 | 48 |
<_join_words> |
| 51 | 49 |
<1> |
| 52 | 50 |
<_join_words> |
| ... | ... | |
| 58 | 56 |
</1> |
| 59 | 57 |
<2>$SpeciesAuthority</2> |
| 60 | 58 |
</_join_words> |
| 61 |
</taxonomicnamewithauthor> |
|
| 59 |
</identifyingtaxonomicname> |
|
| 60 |
<species>$SpeciesName</species> |
|
| 61 |
<subspecies>$SubSpeciesName</subspecies> |
|
| 62 | 62 |
</taxonpath> |
| 63 | 63 |
</taxonpath_id> |
| 64 | 64 |
</taxondetermination> |
| inputs/CTFS/TaxonOccurrence/VegBIEN.csv | ||
|---|---|---|
| 10 | 10 |
SpeciesInvID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1, |
| 11 | 11 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 12 | 12 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 13 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 14 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 15 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 16 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 13 | 17 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 14 | 18 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 15 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 16 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 17 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 18 |
SubSpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 19 | 19 |
Description,,** No join mapping for *Description ** |
| 20 | 20 |
FamilyID,,** No join mapping for *FamilyID ** |
| 21 | 21 |
FieldFamily,,** No join mapping for *FieldFamily ** |
| inputs/CTFS/TaxonOccurrence/test.xml.ref | ||
|---|---|---|
| 14 | 14 |
<taxonpath> |
| 15 | 15 |
<family>$Family</family> |
| 16 | 16 |
<genus>$Genus</genus> |
| 17 |
<species>$SpeciesName</species> |
|
| 18 |
<subspecies>$SubSpeciesName</subspecies> |
|
| 19 |
<taxonomicnamewithauthor> |
|
| 17 |
<identifyingtaxonomicname> |
|
| 20 | 18 |
<_join_words> |
| 21 | 19 |
<1>$Family</1> |
| 22 | 20 |
<2>$Genus</2> |
| 23 | 21 |
<3>$SpeciesName</3> |
| 24 | 22 |
<4>$SubSpeciesName</4> |
| 25 | 23 |
</_join_words> |
| 26 |
</taxonomicnamewithauthor> |
|
| 24 |
</identifyingtaxonomicname> |
|
| 25 |
<species>$SpeciesName</species> |
|
| 26 |
<subspecies>$SubSpeciesName</subspecies> |
|
| 27 | 27 |
</taxonpath> |
| 28 | 28 |
</taxonpath_id> |
| 29 | 29 |
</taxondetermination> |
| inputs/FIA/Organism/test.xml.ref | ||
|---|---|---|
| 63 | 63 |
<taxonpath_id> |
| 64 | 64 |
<taxonpath> |
| 65 | 65 |
<genus>$Genus</genus> |
| 66 |
<species>$SpecificEpithet</species> |
|
| 67 |
<taxonomicnamewithauthor> |
|
| 66 |
<identifyingtaxonomicname> |
|
| 68 | 67 |
<_join_words> |
| 69 | 68 |
<2>$Genus</2> |
| 70 | 69 |
<3>$SpecificEpithet</3> |
| 71 | 70 |
</_join_words> |
| 72 |
</taxonomicnamewithauthor> |
|
| 71 |
</identifyingtaxonomicname> |
|
| 72 |
<species>$SpecificEpithet</species> |
|
| 73 | 73 |
</taxonpath> |
| 74 | 74 |
</taxonpath_id> |
| 75 | 75 |
</taxondetermination> |
| inputs/SALVIAS/plotObservations/test.xml.ref | ||
|---|---|---|
| 121 | 121 |
<author>$auth</author> |
| 122 | 122 |
<family>$Family</family> |
| 123 | 123 |
<genus>$Genus</genus> |
| 124 |
<species>$Species</species> |
|
| 125 |
<subspecies> |
|
| 124 |
<identifyingtaxonomicname> |
|
| 126 | 125 |
<_join_words> |
| 127 | 126 |
<1> |
| 128 |
<_if name="if has infraspecificEpithet"> |
|
| 129 |
<cond>$infra_ep_1</cond> |
|
| 130 |
<then>$infra_rank_1</then> |
|
| 131 |
</_if> |
|
| 132 |
</1> |
|
| 133 |
<2>$infra_ep_1</2> |
|
| 134 |
</_join_words> |
|
| 135 |
</subspecies> |
|
| 136 |
<taxonomicnamewithauthor> |
|
| 137 |
<_join_words> |
|
| 138 |
<1> |
|
| 139 | 127 |
<_join_words> |
| 140 | 128 |
<1>$Family</1> |
| 141 | 129 |
<2>$Genus</2> |
| ... | ... | |
| 155 | 143 |
</1> |
| 156 | 144 |
<2>$auth</2> |
| 157 | 145 |
</_join_words> |
| 158 |
</taxonomicnamewithauthor> |
|
| 146 |
</identifyingtaxonomicname> |
|
| 147 |
<species>$Species</species> |
|
| 148 |
<subspecies> |
|
| 149 |
<_join_words> |
|
| 150 |
<1> |
|
| 151 |
<_if name="if has infraspecificEpithet"> |
|
| 152 |
<cond>$infra_ep_1</cond> |
|
| 153 |
<then>$infra_rank_1</then> |
|
| 154 |
</_if> |
|
| 155 |
</1> |
|
| 156 |
<2>$infra_ep_1</2> |
|
| 157 |
</_join_words> |
|
| 158 |
</subspecies> |
|
| 159 | 159 |
</taxonpath> |
| 160 | 160 |
</taxonpath_id> |
| 161 | 161 |
<taxonfit>$cfaff</taxonfit> |
| ... | ... | |
| 166 | 166 |
<taxonpath> |
| 167 | 167 |
<family>$OrigFamily</family> |
| 168 | 168 |
<genus>$OrigGenus</genus> |
| 169 |
<species>$OrigSpecies</species> |
|
| 170 |
<taxonomicnamewithauthor> |
|
| 169 |
<identifyingtaxonomicname> |
|
| 171 | 170 |
<_join_words> |
| 172 | 171 |
<1>$OrigFamily</1> |
| 173 | 172 |
<2>$OrigGenus</2> |
| 174 | 173 |
<3>$OrigSpecies</3> |
| 175 | 174 |
</_join_words> |
| 176 |
</taxonomicnamewithauthor> |
|
| 175 |
</identifyingtaxonomicname> |
|
| 176 |
<species>$OrigSpecies</species> |
|
| 177 | 177 |
</taxonpath> |
| 178 | 178 |
</taxonpath_id> |
| 179 | 179 |
</taxondetermination> |
| inputs/.TNRS/tnrs/test.xml.ref | ||
|---|---|---|
| 15 | 15 |
<canon_taxonpath_id>0</canon_taxonpath_id> |
| 16 | 16 |
<author>$Accepted_name_author</author> |
| 17 | 17 |
<family>$Accepted_name_family</family> |
| 18 |
<taxonomicname>$Accepted_name</taxonomicname> |
|
| 19 |
<taxonomicnamewithauthor> |
|
| 18 |
<identifyingtaxonomicname> |
|
| 20 | 19 |
<_join_words> |
| 21 | 20 |
<1> |
| 22 | 21 |
<_alt> |
| ... | ... | |
| 26 | 25 |
</1> |
| 27 | 26 |
<2>$Accepted_name_author</2> |
| 28 | 27 |
</_join_words> |
| 29 |
</taxonomicnamewithauthor> |
|
| 28 |
</identifyingtaxonomicname> |
|
| 29 |
<taxonomicname>$Accepted_name</taxonomicname> |
|
| 30 | 30 |
</taxonpath> |
| 31 | 31 |
</canon_taxonpath_id> |
| 32 | 32 |
<family>$Family_matched</family> |
| 33 | 33 |
<genus>$Genus_matched</genus> |
| 34 |
<subspecies> |
|
| 35 |
<_join_words> |
|
| 36 |
<1> |
|
| 37 |
<_if name="if has infraspecificEpithet"> |
|
| 38 |
<cond>$Infraspecific_epithet_matched</cond> |
|
| 39 |
<then> |
|
| 40 |
<_alt> |
|
| 41 |
<0>$Infraspecific_rank</0> |
|
| 42 |
<1>$Name_matched_rank</1> |
|
| 43 |
</_alt> |
|
| 44 |
</then> |
|
| 45 |
</_if> |
|
| 46 |
</1> |
|
| 47 |
<2>$Infraspecific_epithet_matched</2> |
|
| 48 |
</_join_words> |
|
| 49 |
</subspecies> |
|
| 50 |
<taxonomicname>$Name_matched</taxonomicname> |
|
| 51 |
<taxonomicnamewithauthor> |
|
| 34 |
<identifyingtaxonomicname> |
|
| 52 | 35 |
<_alt> |
| 53 | 36 |
<1>$Name_submitted</1> |
| 54 | 37 |
<2> |
| ... | ... | |
| 84 | 67 |
</_join_words> |
| 85 | 68 |
</2> |
| 86 | 69 |
</_alt> |
| 87 |
</taxonomicnamewithauthor> |
|
| 70 |
</identifyingtaxonomicname> |
|
| 71 |
<subspecies> |
|
| 72 |
<_join_words> |
|
| 73 |
<1> |
|
| 74 |
<_if name="if has infraspecificEpithet"> |
|
| 75 |
<cond>$Infraspecific_epithet_matched</cond> |
|
| 76 |
<then> |
|
| 77 |
<_alt> |
|
| 78 |
<0>$Infraspecific_rank</0> |
|
| 79 |
<1>$Name_matched_rank</1> |
|
| 80 |
</_alt> |
|
| 81 |
</then> |
|
| 82 |
</_if> |
|
| 83 |
</1> |
|
| 84 |
<2>$Infraspecific_epithet_matched</2> |
|
| 85 |
</_join_words> |
|
| 86 |
</subspecies> |
|
| 87 |
<taxonomicname>$Name_matched</taxonomicname> |
|
| 88 |
<taxonomicnamewithauthor>$Name_submitted</taxonomicnamewithauthor> |
|
| 88 | 89 |
</taxonpath> |
| 89 | 90 |
</taxonpath_id> |
| 90 | 91 |
</taxondetermination> |
| inputs/U/Specimen/test.xml.ref | ||
|---|---|---|
| 77 | 77 |
<taxonpath> |
| 78 | 78 |
<family>$Family</family> |
| 79 | 79 |
<genus>$Genus</genus> |
| 80 |
<taxonomicnamewithauthor>
|
|
| 80 |
<identifyingtaxonomicname>
|
|
| 81 | 81 |
<_join_words> |
| 82 | 82 |
<1>$Family</1> |
| 83 | 83 |
<2>$Genus</2> |
| 84 | 84 |
</_join_words> |
| 85 |
</taxonomicnamewithauthor>
|
|
| 85 |
</identifyingtaxonomicname>
|
|
| 86 | 86 |
</taxonpath> |
| 87 | 87 |
</taxonpath_id> |
| 88 | 88 |
<determinationdate> |
| inputs/GBIF/Specimen/VegBIEN.csv | ||
|---|---|---|
| 19 | 19 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 20 | 20 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 21 | 21 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 22 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 23 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 24 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 25 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 26 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 27 |
InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 28 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 22 | 29 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 23 | 30 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 24 | 31 |
InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/2/_join_words/2, |
| 25 | 32 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 26 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 27 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 28 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 29 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 30 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
| 31 |
InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2, |
|
| 32 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 33 | 33 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family, |
| 34 | 34 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus, |
| 35 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 36 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 37 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 35 | 38 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicname, |
| 36 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 37 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 38 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 39 | 39 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 40 | 40 |
CatalogNO,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 41 | 41 |
Locality,/location/locationnarrative/_merge/1, |
| inputs/NCU-NCSC/Specimen/test.xml.ref | ||
|---|---|---|
| 67 | 67 |
<taxondetermination> |
| 68 | 68 |
<taxonpath_id> |
| 69 | 69 |
<taxonpath> |
| 70 |
<identifyingtaxonomicname>$Full Taxon Name</identifyingtaxonomicname> |
|
| 70 | 71 |
<taxonomicname>$Full Taxon Name</taxonomicname> |
| 71 |
<taxonomicnamewithauthor>$Full Taxon Name</taxonomicnamewithauthor> |
|
| 72 | 72 |
</taxonpath> |
| 73 | 73 |
</taxonpath_id> |
| 74 | 74 |
</taxondetermination> |
| inputs/MO/Specimen/VegBIEN.csv | ||
|---|---|---|
| 25 | 25 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author, |
| 26 | 26 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family, |
| 27 | 27 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus, |
| 28 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 29 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 30 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 31 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 32 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 33 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/2, |
|
| 28 | 34 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/kingdom, |
| 29 | 35 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species, |
| 30 | 36 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/subspecies/_alt/1, |
| 31 | 37 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 32 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 33 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/1, |
|
| 34 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/2, |
|
| 35 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/3, |
|
| 36 |
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/2/_join_words/4, |
|
| 37 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/2, |
|
| 38 | 38 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
| 39 | 39 |
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 40 | 40 |
Locality,/location/locationnarrative/_merge/1, |
| inputs/ARIZ/Specimen/test.xml.ref | ||
|---|---|---|
| 119 | 119 |
<class>$Class</class> |
| 120 | 120 |
<family>$Family</family> |
| 121 | 121 |
<genus>$Genus</genus> |
| 122 |
<kingdom>$Kingdom</kingdom> |
|
| 123 |
<order>$Order</order> |
|
| 124 |
<phylum>$Phylum</phylum> |
|
| 125 |
<species>$Species</species> |
|
| 126 |
<subspecies>$Subspecies</subspecies> |
|
| 127 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 128 |
<taxonomicnamewithauthor> |
|
| 122 |
<identifyingtaxonomicname> |
|
| 129 | 123 |
<_alt> |
| 130 | 124 |
<1>$ScientificNameAuthor</1> |
| 131 | 125 |
<2> |
| ... | ... | |
| 142 | 136 |
</_alt> |
| 143 | 137 |
</2> |
| 144 | 138 |
</_alt> |
| 145 |
</taxonomicnamewithauthor> |
|
| 139 |
</identifyingtaxonomicname> |
|
| 140 |
<kingdom>$Kingdom</kingdom> |
|
| 141 |
<order>$Order</order> |
|
| 142 |
<phylum>$Phylum</phylum> |
|
| 143 |
<species>$Species</species> |
|
| 144 |
<subspecies>$Subspecies</subspecies> |
|
| 145 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 146 |
<taxonomicnamewithauthor>$ScientificNameAuthor</taxonomicnamewithauthor> |
|
| 146 | 147 |
</taxonpath> |
| 147 | 148 |
</taxonpath_id> |
| 148 | 149 |
<determinationdate> |
| inputs/NCU-NCSC/Specimen/VegBIEN.csv | ||
|---|---|---|
| 14 | 14 |
Full Taxon Name,"/location/locationevent/taxonoccurrence/authortaxoncode/_first/2/_if[@name=""if is taxonpath only""]/else/_first/3", |
| 15 | 15 |
Cultivated?,/location/locationevent/taxonoccurrence/iscultivated/_alt/1, |
| 16 | 16 |
Accession Number,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3, |
| 17 |
Full Taxon Name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
|
| 17 | 18 |
Full Taxon Name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
| 18 |
Full Taxon Name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor/_alt/2/_join_words/1/_alt/1, |
|
| 19 | 19 |
Barcode,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
| 20 | 20 |
Country,/location/locationplace/*_id/placepath/country, |
| 21 | 21 |
County,/location/locationplace/*_id/placepath/county, |
| inputs/SpeciesLink/Specimen/test.xml.ref | ||
|---|---|---|
| 300 | 300 |
<2>$dwc_terms_genus</2> |
| 301 | 301 |
</_alt> |
| 302 | 302 |
</genus> |
| 303 |
<kingdom> |
|
| 304 |
<_alt> |
|
| 305 |
<0>$conceptual_darwin_2003_1_0_Kingdom</0> |
|
| 306 |
<1>$dwc_dwcore_Kingdom</1> |
|
| 307 |
<2>$dwc_terms_kingdom</2> |
|
| 308 |
</_alt> |
|
| 309 |
</kingdom> |
|
| 310 |
<order> |
|
| 311 |
<_alt> |
|
| 312 |
<0>$conceptual_darwin_2003_1_0_Order</0> |
|
| 313 |
<1>$dwc_dwcore_Order</1> |
|
| 314 |
<2>$dwc_terms_order</2> |
|
| 315 |
</_alt> |
|
| 316 |
</order> |
|
| 317 |
<phylum> |
|
| 318 |
<_alt> |
|
| 319 |
<0>$conceptual_darwin_2003_1_0_Phylum</0> |
|
| 320 |
<1>$dwc_dwcore_Phylum</1> |
|
| 321 |
<2>$dwc_terms_phylum</2> |
|
| 322 |
</_alt> |
|
| 323 |
</phylum> |
|
| 324 |
<species> |
|
| 325 |
<_alt> |
|
| 326 |
<0>$conceptual_darwin_2003_1_0_Species</0> |
|
| 327 |
<1>$dwc_dwcore_SpecificEpithet</1> |
|
| 328 |
<2>$dwc_terms_specificEpithet</2> |
|
| 329 |
</_alt> |
|
| 330 |
</species> |
|
| 331 |
<subspecies> |
|
| 332 |
<_alt> |
|
| 333 |
<1>$conceptual_darwin_2003_1_0_Subspecies</1> |
|
| 334 |
<2> |
|
| 335 |
<_alt> |
|
| 336 |
<0>$dwc_dwcore_InfraspecificEpithet</0> |
|
| 337 |
<1>$dwc_terms_infraspecificEpithet</1> |
|
| 338 |
</_alt> |
|
| 339 |
</2> |
|
| 340 |
</_alt> |
|
| 341 |
</subspecies> |
|
| 342 |
<taxonomicname> |
|
| 343 |
<_alt> |
|
| 344 |
<0>$conceptual_darwin_2003_1_0_ScientificName</0> |
|
| 345 |
<1>$dwc_dwcore_ScientificName</1> |
|
| 346 |
<2>$dwc_terms_scientificName</2> |
|
| 347 |
</_alt> |
|
| 348 |
</taxonomicname> |
|
| 349 |
<taxonomicnamewithauthor> |
|
| 303 |
<identifyingtaxonomicname> |
|
| 350 | 304 |
<_join_words> |
| 351 | 305 |
<1> |
| 352 | 306 |
<_alt> |
| ... | ... | |
| 399 | 353 |
</_alt> |
| 400 | 354 |
</2> |
| 401 | 355 |
</_join_words> |
| 402 |
</taxonomicnamewithauthor> |
|
| 356 |
</identifyingtaxonomicname> |
|
| 357 |
<kingdom> |
|
| 358 |
<_alt> |
|
| 359 |
<0>$conceptual_darwin_2003_1_0_Kingdom</0> |
|
| 360 |
<1>$dwc_dwcore_Kingdom</1> |
|
| 361 |
<2>$dwc_terms_kingdom</2> |
|
| 362 |
</_alt> |
|
| 363 |
</kingdom> |
|
| 364 |
<order> |
|
| 365 |
<_alt> |
|
| 366 |
<0>$conceptual_darwin_2003_1_0_Order</0> |
|
| 367 |
<1>$dwc_dwcore_Order</1> |
|
| 368 |
<2>$dwc_terms_order</2> |
|
| 369 |
</_alt> |
|
| 370 |
</order> |
|
| 371 |
<phylum> |
|
| 372 |
<_alt> |
|
| 373 |
<0>$conceptual_darwin_2003_1_0_Phylum</0> |
|
| 374 |
<1>$dwc_dwcore_Phylum</1> |
|
| 375 |
<2>$dwc_terms_phylum</2> |
|
| 376 |
</_alt> |
|
| 377 |
</phylum> |
|
| 378 |
<species> |
|
| 379 |
<_alt> |
|
| 380 |
<0>$conceptual_darwin_2003_1_0_Species</0> |
|
| 381 |
<1>$dwc_dwcore_SpecificEpithet</1> |
|
| 382 |
<2>$dwc_terms_specificEpithet</2> |
|
| 383 |
</_alt> |
|
| 384 |
</species> |
|
| 385 |
<subspecies> |
|
| 386 |
<_alt> |
|
| 387 |
<1>$conceptual_darwin_2003_1_0_Subspecies</1> |
|
| 388 |
<2> |
|
| 389 |
<_alt> |
|
| 390 |
<0>$dwc_dwcore_InfraspecificEpithet</0> |
|
| 391 |
<1>$dwc_terms_infraspecificEpithet</1> |
|
| 392 |
</_alt> |
|
| 393 |
</2> |
|
| 394 |
</_alt> |
|
| 395 |
</subspecies> |
|
| 396 |
<taxonomicname> |
|
| 397 |
<_alt> |
|
| 398 |
<0>$conceptual_darwin_2003_1_0_ScientificName</0> |
|
| 399 |
<1>$dwc_dwcore_ScientificName</1> |
|
| 400 |
<2>$dwc_terms_scientificName</2> |
|
| 401 |
</_alt> |
|
| 402 |
</taxonomicname> |
|
| 403 | 403 |
</taxonpath> |
| 404 | 404 |
</taxonpath_id> |
| 405 | 405 |
<determinationdate> |
| inputs/MO/Specimen/test.xml.ref | ||
|---|---|---|
| 91 | 91 |
<author>$ScientificNameAuthor</author> |
| 92 | 92 |
<family>$family</family> |
| 93 | 93 |
<genus>$genus</genus> |
| 94 |
<kingdom>$Kingdom</kingdom> |
|
| 95 |
<species>$species</species> |
|
| 96 |
<subspecies>$Subspecies</subspecies> |
|
| 97 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 98 |
<taxonomicnamewithauthor> |
|
| 94 |
<identifyingtaxonomicname> |
|
| 99 | 95 |
<_join_words> |
| 100 | 96 |
<1> |
| 101 | 97 |
<_alt> |
| ... | ... | |
| 112 | 108 |
</1> |
| 113 | 109 |
<2>$ScientificNameAuthor</2> |
| 114 | 110 |
</_join_words> |
| 115 |
</taxonomicnamewithauthor> |
|
| 111 |
</identifyingtaxonomicname> |
|
| 112 |
<kingdom>$Kingdom</kingdom> |
|
| 113 |
<species>$species</species> |
|
| 114 |
<subspecies>$Subspecies</subspecies> |
|
| 115 |
<taxonomicname>$ScientificName</taxonomicname> |
|
| 116 | 116 |
</taxonpath> |
| 117 | 117 |
</taxonpath_id> |
| 118 | 118 |
</taxondetermination> |
| inputs/QMOR/Specimen/test.xml.ref | ||
|---|---|---|
| 104 | 104 |
<class>$class</class> |
| 105 | 105 |
<family>$family</family> |
| 106 | 106 |
<genus>$genus</genus> |
| 107 |
<kingdom>$kingdom</kingdom> |
|
| 108 |
<order>$order</order> |
|
| 109 |
<phylum>$phylum</phylum> |
|
| 110 |
<species>$specificEpithet</species> |
|
| 111 |
<subspecies> |
|
| 107 |
<identifyingtaxonomicname> |
|
| 112 | 108 |
<_join_words> |
| 113 | 109 |
<1> |
| 114 |
<_if name="if has infraspecificEpithet"> |
|
| 115 |
<cond>$infraspecificEpithet</cond> |
|
| 116 |
<then>$taxonRank</then> |
|
| 117 |
</_if> |
|
| 118 |
</1> |
|
| 119 |
<2>$infraspecificEpithet</2> |
|
| 120 |
</_join_words> |
|
| 121 |
</subspecies> |
|
| 122 |
<taxonomicname>$scientificName</taxonomicname> |
|
| 123 |
<taxonomicnamewithauthor> |
|
| 124 |
<_join_words> |
|
| 125 |
<1> |
|
| 126 | 110 |
<_alt> |
| 127 | 111 |
<1>$scientificName</1> |
| 128 | 112 |
<2> |
| ... | ... | |
| 147 | 131 |
</1> |
| 148 | 132 |
<2>$scientificNameAuthorship</2> |
| 149 | 133 |
</_join_words> |
| 150 |
</taxonomicnamewithauthor> |
|
| 134 |
</identifyingtaxonomicname> |
|
| 135 |
<kingdom>$kingdom</kingdom> |
|
| 136 |
<order>$order</order> |
|
| 137 |
<phylum>$phylum</phylum> |
|
| 138 |
<species>$specificEpithet</species> |
|
| 139 |
<subspecies> |
|
| 140 |
<_join_words> |
|
| 141 |
<1> |
|
| 142 |
<_if name="if has infraspecificEpithet"> |
|
| 143 |
<cond>$infraspecificEpithet</cond> |
|
| 144 |
<then>$taxonRank</then> |
|
| 145 |
</_if> |
|
| 146 |
</1> |
|
| 147 |
<2>$infraspecificEpithet</2> |
|
| 148 |
</_join_words> |
|
| 149 |
</subspecies> |
|
| 150 |
<taxonomicname>$scientificName</taxonomicname> |
|
| 151 | 151 |
</taxonpath> |
| 152 | 152 |
</taxonpath_id> |
| 153 | 153 |
<determinationdate><_date><date><_dateRangeStart><value>$dateIdentified</value></_dateRangeStart></date></_date></determinationdate> |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: taxonomic terms: Remapped the concatenated taxonomic name to new identifyingtaxonomicname to use it directly to match up with the TNRS submitted name. Continue to map scientificNameWithAuthorship to taxonomicnamewithauthor.