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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 about 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 almost 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5126 almost 12 years Aaron Marcuse-Kubitza tnrs_db: Exclude taxonomic names which have alr...
  config 272 over 12 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5138 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: non-TNRS taxonpat...
  lib 5146 almost 12 years Aaron Marcuse-Kubitza csvs.py: Added tsv_encode_map for use in creati...
  mappings 5138 almost 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: non-TNRS taxonpat...
  schemas 5141 almost 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: placepath.canon_placepath_...
  to_do 4524 almost 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 almost 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 almost 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 11.3 KB 5040 almost 12 years Aaron Marcuse-Kubitza README.TXT: Data import: Starting column-based ...
map 1.28 KB 4981 almost 12 years Aaron Marcuse-Kubitza root map: Fixed custom public schema override t...
new_terms.csv 30.4 KB 4887 almost 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 almost 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5146 10/01/2012 08:46 PM Aaron Marcuse-Kubitza

csvs.py: Added tsv_encode_map for use in creating TSVs parsed by TsvReader

5145 10/01/2012 06:42 PM Aaron Marcuse-Kubitza

csvs.py: TsvReader: Also interpret '\t' as a tab, to provide a mechanism for encoding embedded tabs

5144 10/01/2012 05:47 PM Aaron Marcuse-Kubitza

tnrs.py: gwt_encode(): Escape special characters in the string instead of removing them, so that TNRS receives the original name rather than a modified version. This will help make the submitted names match up with the returned Name_submitted.

5143 10/01/2012 05:45 PM Aaron Marcuse-Kubitza

strings.py: Added json_encode()

5142 10/01/2012 05:44 PM Aaron Marcuse-Kubitza

strings.py: Added esc_quotes()

5141 10/01/2012 04:52 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: placepath.canon_placepath_id: Changed hierarchy comment to match the taxonpath.canon_taxonpath_id comment, but with a two-level hierarchy of datasource name -> accepted name. This may later be changed to a three-level hierarchy like taxonpath.canon_taxonpath_id depending on how GNRS works.

5140 10/01/2012 04:49 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonpath.canon_taxonpath_id: Changed comment to specify that taxonpaths should now be linked in a three-level hierarchy of datasource name -> concatenated name -> accepted name

5139 10/01/2012 04:45 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonpath, placepath: Changed "scrubbed" to "accepted" to emphasize that the name is the accepted name returned by TNRS or GNRS, rather than merely the matched name

5138 10/01/2012 04:38 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: non-TNRS taxonpaths: Store the concatenated identifyingtaxonomicname in a separate taxonpath owned by the TNRS datasource, so that it will match up with (and create a link to) the corresponding submitted TNRS name's taxonpath. This in turn is linked to the TNRS-determined accepted name, thus creating a three-level hierarchy of datasource name -> concatenated name -> accepted name.

5137 10/01/2012 03:59 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonomic terms: Remapped the concatenated taxonomic name to new identifyingtaxonomicname to use it directly to match up with the TNRS submitted name. Continue to map scientificNameWithAuthorship to taxonomicnamewithauthor.

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