Revision 5177
Added by Aaron Marcuse-Kubitza about 12 years ago
inputs/test_taxonomic_names/Taxon/+header.txt | ||
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scientificNameID scientificName |
inputs/test_taxonomic_names/Taxon/map.csv | ||
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test_taxonomic_names,VegCore,Filter,Comments |
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scientificNameID,scientificNameID,, |
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scientificName,scientificName,, |
inputs/test_taxonomic_names/Taxon/VegBIEN.csv | ||
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test_taxonomic_names,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments |
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scientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3", |
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scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
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scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname, |
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scientificNameID,,** No join mapping for scientificNameID ** |
inputs/test_taxonomic_names/Taxon/test.xml.ref | ||
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Put template: |
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<VegBIEN> |
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<_simplifyPath id="-1"> |
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<next>parent_id</next> |
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<path> |
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<location> |
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<locationevent> |
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<taxonoccurrence> |
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<taxondetermination> |
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<taxonpath_id> |
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<taxonpath> |
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<canon_taxonpath_id> |
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<taxonpath> |
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<datasource_id><party><organizationname>TNRS</organizationname></party></datasource_id> |
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<identifyingtaxonomicname>$scientificName</identifyingtaxonomicname> |
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</taxonpath> |
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</canon_taxonpath_id> |
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<taxonomicname>$scientificName</taxonomicname> |
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</taxonpath> |
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</taxonpath_id> |
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</taxondetermination> |
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</taxonoccurrence> |
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</locationevent> |
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</location> |
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</path> |
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</_simplifyPath> |
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</VegBIEN> |
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Inserted 9 new rows into database |
inputs/test_taxonomic_names/Taxon/unmapped_terms.csv | ||
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scientificNameID |
Also available in: Unified diff
Added inputs/test_taxonomic_names/