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Revision 5225

schemas/vegbien.sql: Renamed taxonpath -> taxonconcept as part of taxonomic schema refactoring at <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/2012-10-03_conference_call#Taxonomic-schema-refactoring>

View differences:

VegBIEN.csv
32 32
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/givenname/_namePart/first,
33 33
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/middlename/_namePart/middle,
34 34
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/surname/_namePart/last,
35
Autor (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=species]/author_id/party/surname",
36
Specific epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=species]/taxonname",
37
Genera,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=genus]/taxonname",
38
Family (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=family]/taxonname",
39
Specie+autor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",
40
Species and morphotypes,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1","Contains less than ""Specie+autor"""
41
Family (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
42
Genera,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
43
Specific epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
44
Autor (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
45
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/author,
46
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/family,
47
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/genus,
48
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/species,
49
Species and morphotypes,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicname,"Contains less than ""Specie+autor"""
50
Specie+autor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonpath/taxonomicnamewithauthor,
35
Autor (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=species]/author_id/party/surname",
36
Specific epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=species]/taxonname",
37
Genera,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=genus]/taxonname",
38
Family (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=family]/taxonname",
39
Specie+autor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",
40
Species and morphotypes,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1","Contains less than ""Specie+autor"""
41
Family (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
42
Genera,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
43
Specific epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
44
Autor (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
45
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,
46
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
47
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
48
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
49
Species and morphotypes,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname,"Contains less than ""Specie+autor"""
50
Specie+autor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicnamewithauthor,
51 51
Qualifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,
52
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
53
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/canon_taxonpath_id/taxonpath:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,Often = Genera
54
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/family,
55
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonpath/genus,Often = Genera
52
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
53
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/canon_taxonconcept_id/taxonconcept:[datasource_id/party/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,Often = Genera
54
Field family,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/family,
55
Field name,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/genus,Often = Genera
56 56
Index collector,/location/locationevent/taxonoccurrence/verbatimcollectorname,
57 57
Specimen,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then",
58 58
Basal area,,"** No join mapping for *Basal area ** Would be basalDiameter, but need formula to translate"

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