Revision 5240
Added by Aaron Marcuse-Kubitza about 12 years ago
inputs/XAL/Specimen/VegBIEN.csv | ||
---|---|---|
40 | 40 |
darwin:ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
41 | 41 |
darwin:ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
42 | 42 |
darwin:Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
43 |
darwin:IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
44 |
darwin:IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
45 |
darwin:IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
43 | 46 |
darwin:Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
44 | 47 |
darwin:Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
45 | 48 |
darwin:Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/NY/Specimen/VegBIEN.csv | ||
---|---|---|
45 | 45 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
46 | 46 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
47 | 47 |
Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
48 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
49 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
50 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
48 | 51 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
49 | 52 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
50 | 53 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/NY/Specimen/test.xml.ref | ||
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145 | 145 |
</canon_taxonconcept_id> |
146 | 146 |
<author>$ScientificNameAuthor</author> |
147 | 147 |
<class>$Class</class> |
148 |
<definer_id> |
|
149 |
<_simplifyPath> |
|
150 |
<next>datasource_id</next> |
|
151 |
<path> |
|
152 |
<party> |
|
153 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
|
154 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
|
155 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
|
156 |
</party> |
|
157 |
</path> |
|
158 |
</_simplifyPath> |
|
159 |
</definer_id> |
|
148 | 160 |
<family>$Family</family> |
149 | 161 |
<genus>$Genus</genus> |
150 | 162 |
<kingdom>$Kingdom</kingdom> |
inputs/Madidi/Organism/VegBIEN.csv | ||
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43 | 43 |
Specific epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
44 | 44 |
Autor (revised),"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
45 | 45 |
Autor (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
46 |
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
47 |
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
48 |
Determined by,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
46 | 49 |
Family (revised),/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
47 | 50 |
Genera,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
48 | 51 |
Specific epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
inputs/Madidi/Organism/test.xml.ref | ||
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103 | 103 |
</taxonconcept> |
104 | 104 |
</canon_taxonconcept_id> |
105 | 105 |
<author>$Autor (revised)</author> |
106 |
<definer_id> |
|
107 |
<_simplifyPath> |
|
108 |
<next>datasource_id</next> |
|
109 |
<path> |
|
110 |
<party> |
|
111 |
<givenname><_namePart><first>$Determined by</first></_namePart></givenname> |
|
112 |
<middlename><_namePart><middle>$Determined by</middle></_namePart></middlename> |
|
113 |
<surname><_namePart><last>$Determined by</last></_namePart></surname> |
|
114 |
</party> |
|
115 |
</path> |
|
116 |
</_simplifyPath> |
|
117 |
</definer_id> |
|
106 | 118 |
<family>$Family (revised)</family> |
107 | 119 |
<genus>$Genera</genus> |
108 | 120 |
<species>$Specific epithet</species> |
inputs/ACAD/Specimen/VegBIEN.csv | ||
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43 | 43 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
44 | 44 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
45 | 45 |
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
46 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
47 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
48 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
46 | 49 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
47 | 50 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
48 | 51 |
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/ACAD/Specimen/test.xml.ref | ||
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115 | 115 |
</canon_taxonconcept_id> |
116 | 116 |
<author>$scientificNameAuthorship</author> |
117 | 117 |
<class>$class</class> |
118 |
<definer_id> |
|
119 |
<_simplifyPath> |
|
120 |
<next>datasource_id</next> |
|
121 |
<path> |
|
122 |
<party> |
|
123 |
<givenname><_namePart><first>$identifiedBy</first></_namePart></givenname> |
|
124 |
<middlename><_namePart><middle>$identifiedBy</middle></_namePart></middlename> |
|
125 |
<surname><_namePart><last>$identifiedBy</last></_namePart></surname> |
|
126 |
</party> |
|
127 |
</path> |
|
128 |
</_simplifyPath> |
|
129 |
</definer_id> |
|
118 | 130 |
<family>$family</family> |
119 | 131 |
<genus>$genus</genus> |
120 | 132 |
<kingdom>$kingdom</kingdom> |
inputs/U/Specimen/VegBIEN.csv | ||
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20 | 20 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=family]/taxonname", |
21 | 21 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
22 | 22 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
23 |
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
24 |
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
25 |
Detby,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
23 | 26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
24 | 27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
25 | 28 |
Detyy,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
inputs/U/Specimen/test.xml.ref | ||
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90 | 90 |
</identifyingtaxonomicname> |
91 | 91 |
</taxonconcept> |
92 | 92 |
</canon_taxonconcept_id> |
93 |
<definer_id> |
|
94 |
<_simplifyPath> |
|
95 |
<next>datasource_id</next> |
|
96 |
<path> |
|
97 |
<party> |
|
98 |
<givenname><_namePart><first>$Detby</first></_namePart></givenname> |
|
99 |
<middlename><_namePart><middle>$Detby</middle></_namePart></middlename> |
|
100 |
<surname><_namePart><last>$Detby</last></_namePart></surname> |
|
101 |
</party> |
|
102 |
</path> |
|
103 |
</_simplifyPath> |
|
104 |
</definer_id> |
|
93 | 105 |
<family>$Family</family> |
94 | 106 |
<genus>$Genus</genus> |
95 | 107 |
</taxonconcept> |
inputs/ARIZ/Specimen/VegBIEN.csv | ||
---|---|---|
47 | 47 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
48 | 48 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4", |
49 | 49 |
Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
50 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
51 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
52 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
50 | 53 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
51 | 54 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
52 | 55 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/ARIZ/Specimen/test.xml.ref | ||
---|---|---|
144 | 144 |
</taxonconcept> |
145 | 145 |
</canon_taxonconcept_id> |
146 | 146 |
<class>$Class</class> |
147 |
<definer_id> |
|
148 |
<_simplifyPath> |
|
149 |
<next>datasource_id</next> |
|
150 |
<path> |
|
151 |
<party> |
|
152 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
|
153 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
|
154 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
|
155 |
</party> |
|
156 |
</path> |
|
157 |
</_simplifyPath> |
|
158 |
</definer_id> |
|
147 | 159 |
<family>$Family</family> |
148 | 160 |
<genus>$Genus</genus> |
149 | 161 |
<kingdom>$Kingdom</kingdom> |
inputs/GBIF/Specimen/VegBIEN.csv | ||
---|---|---|
30 | 30 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2", |
31 | 31 |
AuthorOfScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
32 | 32 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
33 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
34 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
35 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
33 | 36 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
34 | 37 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
35 | 38 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
inputs/GBIF/Specimen/test.xml.ref | ||
---|---|---|
84 | 84 |
</taxonconcept> |
85 | 85 |
</canon_taxonconcept_id> |
86 | 86 |
<author>$AuthorOfScientificName</author> |
87 |
<definer_id> |
|
88 |
<_simplifyPath> |
|
89 |
<next>datasource_id</next> |
|
90 |
<path> |
|
91 |
<party> |
|
92 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
|
93 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
|
94 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
|
95 |
</party> |
|
96 |
</path> |
|
97 |
</_simplifyPath> |
|
98 |
</definer_id> |
|
87 | 99 |
<family>$Family</family> |
88 | 100 |
<genus>$Genus</genus> |
89 | 101 |
<species>$SpecificEpithet</species> |
inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
---|---|---|
157 | 157 |
conceptual_darwin_2003_1_0_Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
158 | 158 |
dwc_dwcore_Class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
159 | 159 |
dwc_terms_class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
160 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
161 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
162 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
163 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
164 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
165 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
166 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
167 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
168 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
160 | 169 |
conceptual_darwin_2003_1_0_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
161 | 170 |
dwc_dwcore_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
162 | 171 |
dwc_terms_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
inputs/SpeciesLink/Specimen/test.xml.ref | ||
---|---|---|
332 | 332 |
<2>$dwc_terms_class</2> |
333 | 333 |
</_alt> |
334 | 334 |
</class> |
335 |
<definer_id> |
|
336 |
<_simplifyPath> |
|
337 |
<next>datasource_id</next> |
|
338 |
<path> |
|
339 |
<party> |
|
340 |
<givenname> |
|
341 |
<_namePart> |
|
342 |
<first> |
|
343 |
<_alt> |
|
344 |
<0>$conceptual_darwin_2003_1_0_IdentifiedBy</0> |
|
345 |
<1>$dwc_curatorial_IdentifiedBy</1> |
|
346 |
<2>$dwc_terms_identifiedBy</2> |
|
347 |
</_alt> |
|
348 |
</first> |
|
349 |
</_namePart> |
|
350 |
</givenname> |
|
351 |
<middlename> |
|
352 |
<_namePart> |
|
353 |
<middle> |
|
354 |
<_alt> |
|
355 |
<0>$conceptual_darwin_2003_1_0_IdentifiedBy</0> |
|
356 |
<1>$dwc_curatorial_IdentifiedBy</1> |
|
357 |
<2>$dwc_terms_identifiedBy</2> |
|
358 |
</_alt> |
|
359 |
</middle> |
|
360 |
</_namePart> |
|
361 |
</middlename> |
|
362 |
<surname> |
|
363 |
<_namePart> |
|
364 |
<last> |
|
365 |
<_alt> |
|
366 |
<0>$conceptual_darwin_2003_1_0_IdentifiedBy</0> |
|
367 |
<1>$dwc_curatorial_IdentifiedBy</1> |
|
368 |
<2>$dwc_terms_identifiedBy</2> |
|
369 |
</_alt> |
|
370 |
</last> |
|
371 |
</_namePart> |
|
372 |
</surname> |
|
373 |
</party> |
|
374 |
</path> |
|
375 |
</_simplifyPath> |
|
376 |
</definer_id> |
|
335 | 377 |
<family> |
336 | 378 |
<_alt> |
337 | 379 |
<0>$conceptual_darwin_2003_1_0_Family</0> |
inputs/MO/Specimen/VegBIEN.csv | ||
---|---|---|
35 | 35 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4", |
36 | 36 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
37 | 37 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
38 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
39 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
40 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
38 | 41 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
39 | 42 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
40 | 43 |
Kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/MO/Specimen/test.xml.ref | ||
---|---|---|
116 | 116 |
</taxonconcept> |
117 | 117 |
</canon_taxonconcept_id> |
118 | 118 |
<author>$ScientificNameAuthor</author> |
119 |
<definer_id> |
|
120 |
<_simplifyPath> |
|
121 |
<next>datasource_id</next> |
|
122 |
<path> |
|
123 |
<party> |
|
124 |
<givenname><_namePart><first>$IdentifiedBy</first></_namePart></givenname> |
|
125 |
<middlename><_namePart><middle>$IdentifiedBy</middle></_namePart></middlename> |
|
126 |
<surname><_namePart><last>$IdentifiedBy</last></_namePart></surname> |
|
127 |
</party> |
|
128 |
</path> |
|
129 |
</_simplifyPath> |
|
130 |
</definer_id> |
|
119 | 131 |
<family>$family</family> |
120 | 132 |
<genus>$genus</genus> |
121 | 133 |
<kingdom>$Kingdom</kingdom> |
inputs/QMOR/Specimen/VegBIEN.csv | ||
---|---|---|
50 | 50 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has accepted name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[datasource_id/party:[datasource_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2", |
51 | 51 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
52 | 52 |
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
53 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
54 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
55 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
53 | 56 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
54 | 57 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
55 | 58 |
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
inputs/QMOR/Specimen/test.xml.ref | ||
---|---|---|
139 | 139 |
</canon_taxonconcept_id> |
140 | 140 |
<author>$scientificNameAuthorship</author> |
141 | 141 |
<class>$class</class> |
142 |
<definer_id> |
|
143 |
<_simplifyPath> |
|
144 |
<next>datasource_id</next> |
|
145 |
<path> |
|
146 |
<party> |
|
147 |
<givenname><_namePart><first>$identifiedBy</first></_namePart></givenname> |
|
148 |
<middlename><_namePart><middle>$identifiedBy</middle></_namePart></middlename> |
|
149 |
<surname><_namePart><last>$identifiedBy</last></_namePart></surname> |
|
150 |
</party> |
|
151 |
</path> |
|
152 |
</_simplifyPath> |
|
153 |
</definer_id> |
|
142 | 154 |
<family>$family</family> |
143 | 155 |
<genus>$genus</genus> |
144 | 156 |
<kingdom>$kingdom</kingdom> |
mappings/VegCore-VegBIEN.csv | ||
---|---|---|
193 | 193 |
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
194 | 194 |
class,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/class, |
195 | 195 |
cultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/cultivar, |
196 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/givenname/_namePart/first, |
|
197 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/middlename/_namePart/middle, |
|
198 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/definer_id/_simplifyPath:[next=datasource_id]/path/party/surname/_namePart/last, |
|
196 | 199 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
197 | 200 |
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/forma, |
198 | 201 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
mappings/for_review/VegCore-VegBIEN.csv | ||
---|---|---|
193 | 193 |
scientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/author, |
194 | 194 |
class,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/class, |
195 | 195 |
cultivar,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/cultivar, |
196 |
identifiedBy,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/definer_id/party/givenname, |
|
197 |
identifiedBy,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/definer_id/party/middlename, |
|
198 |
identifiedBy,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/definer_id/party/surname, |
|
196 | 199 |
family,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/family, |
197 | 200 |
forma,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/forma, |
198 | 201 |
genus,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/genus, |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Populated new taxonconcept.definer_id from identifiedBy, or when no identifiedBy is specified, from the datasource itself (using _simplifyPath:[next=datasource_id])