Revision 5256
Added by Aaron Marcuse-Kubitza about 12 years ago
| inputs/.TNRS/tnrs/VegBIEN.csv | ||
|---|---|---|
| 8 | 8 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=species]/taxonname", |
| 9 | 9 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=genus]/taxonname", |
| 10 | 10 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=family]/taxonname",Contains family based on matched name |
| 11 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
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| 11 | 12 |
Name_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
| 12 | 13 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",Contains family based on matched name
|
| 13 | 14 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
| 14 | 15 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
| 15 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
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| 16 | 16 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
| 17 | 17 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
| 18 | 18 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
| 19 | 19 |
Name_matched_author,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",Contains author based on matched name
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| 20 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept:[@fkey=canon_taxonconcept_id],else/.}/morphospecies",
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| 21 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept:[@fkey=canon_taxonconcept_id]}/identifyingtaxonomicname",
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| 20 | 22 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/author, |
| 21 | 23 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/family, |
| 22 | 24 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1, |
| ... | ... | |
| 29 | 31 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Contains author based on matched name |
| 30 | 32 |
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,Contains family based on matched name |
| 31 | 33 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 32 |
Unmatched_terms,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/morphospecies, |
|
| 33 | 34 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 34 | 35 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 35 | 36 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 36 | 37 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/2, |
| 37 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/identifyingtaxonomicname, |
|
| 38 | 38 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
| 39 | 39 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/verbatimrank, |
| 40 | 40 |
Accepted_name_lsid,,** No non-empty join mapping for OMIT ** |
| inputs/.TNRS/tnrs/test.xml.ref | ||
|---|---|---|
| 9 | 9 |
<taxondetermination> |
| 10 | 10 |
<taxonconcept_id> |
| 11 | 11 |
<taxonconcept> |
| 12 |
<identifyingtaxonomicname> |
|
| 13 |
<_join_words> |
|
| 14 |
<1> |
|
| 15 |
<_alt> |
|
| 16 |
<1>$Name_matched</1> |
|
| 17 |
<2> |
|
| 18 |
<_join_words> |
|
| 19 |
<1>$Name_matched_accepted_family</1> |
|
| 20 |
<2>$Genus_matched</2> |
|
| 21 |
<3>$Specific_epithet_matched</3> |
|
| 22 |
<5> |
|
| 23 |
<_join_words> |
|
| 24 |
<1> |
|
| 25 |
<_if name="if has infraspecificEpithet"> |
|
| 26 |
<cond>$Infraspecific_epithet_matched</cond> |
|
| 27 |
<then>$Name_matched_rank</then> |
|
| 28 |
</_if> |
|
| 29 |
</1> |
|
| 30 |
<2>$Infraspecific_epithet_matched</2> |
|
| 31 |
</_join_words> |
|
| 32 |
</5> |
|
| 33 |
</_join_words> |
|
| 34 |
</2> |
|
| 35 |
</_alt> |
|
| 36 |
</1> |
|
| 37 |
<2>$Name_matched_author</2> |
|
| 38 |
</_join_words> |
|
| 39 |
</identifyingtaxonomicname> |
|
| 12 | 40 |
<taxon_id> |
| 13 | 41 |
<taxon> |
| 14 | 42 |
<rank>cultivar</rank> |
| ... | ... | |
| 60 | 88 |
</parent_id> |
| 61 | 89 |
</taxon> |
| 62 | 90 |
</taxon_id> |
| 63 |
<identifyingtaxonomicname> |
|
| 64 |
<_join_words> |
|
| 65 |
<1> |
|
| 66 |
<_alt> |
|
| 67 |
<1>$Name_matched</1> |
|
| 68 |
<2> |
|
| 69 |
<_join_words> |
|
| 70 |
<1>$Name_matched_accepted_family</1> |
|
| 71 |
<2>$Genus_matched</2> |
|
| 72 |
<3> |
|
| 73 |
<_join_words> |
|
| 74 |
<1>$Specific_epithet_matched</1> |
|
| 75 |
<2>$Unmatched_terms</2> |
|
| 76 |
</_join_words> |
|
| 77 |
</3> |
|
| 78 |
<5> |
|
| 79 |
<_join_words> |
|
| 80 |
<1> |
|
| 81 |
<_if name="if has infraspecificEpithet"> |
|
| 82 |
<cond>$Infraspecific_epithet_matched</cond> |
|
| 83 |
<then>$Name_matched_rank</then> |
|
| 84 |
</_if> |
|
| 85 |
</1> |
|
| 86 |
<2>$Infraspecific_epithet_matched</2> |
|
| 87 |
</_join_words> |
|
| 88 |
</5> |
|
| 89 |
</_join_words> |
|
| 90 |
</2> |
|
| 91 |
</_alt> |
|
| 92 |
</1> |
|
| 93 |
<2>$Name_matched_author</2> |
|
| 94 |
</_join_words> |
|
| 95 |
</identifyingtaxonomicname> |
|
| 91 |
<taxonconcept fkey="canon_taxonconcept_id"> |
|
| 92 |
<morphospecies>$Unmatched_terms</morphospecies> |
|
| 93 |
<identifyingtaxonomicname>$Name_submitted</identifyingtaxonomicname> |
|
| 94 |
</taxonconcept> |
|
| 96 | 95 |
<_set_canon_taxonconcept> |
| 97 | 96 |
<canon_taxonconcept_id> |
| 98 | 97 |
<taxonconcept> |
| ... | ... | |
| 117 | 116 |
<author>$Name_matched_author</author> |
| 118 | 117 |
<family>$Name_matched_accepted_family</family> |
| 119 | 118 |
<genus>$Genus_matched</genus> |
| 120 |
<morphospecies>$Unmatched_terms</morphospecies> |
|
| 121 | 119 |
<species>$Specific_epithet_matched</species> |
| 122 | 120 |
<subspecies> |
| 123 | 121 |
<_join_words> |
| ... | ... | |
| 130 | 128 |
<2>$Infraspecific_epithet_matched</2> |
| 131 | 129 |
</_join_words> |
| 132 | 130 |
</subspecies> |
| 133 |
<taxonconcept fkey="canon_taxonconcept_id"><identifyingtaxonomicname>$Name_submitted</identifyingtaxonomicname></taxonconcept> |
|
| 134 | 131 |
<taxonomicname>$Name_matched</taxonomicname> |
| 135 | 132 |
<verbatimrank>$Name_matched_rank</verbatimrank> |
| 136 | 133 |
</taxonconcept> |
| mappings/VegCore-VegBIEN.csv | ||
|---|---|---|
| 146 | 146 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,family,order,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=class]/taxonname", |
| 147 | 147 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,family,order,class,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=phylum]/taxonname", |
| 148 | 148 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/then/taxon_id/_forEach:[in:[cultivar,forma,variety,infraspecies,subspecies,species,genus,family,order,class,phylum,],do=""taxon[rank=_val]/parent_id""]/taxon[rank=kingdom]/taxonname", |
| 149 |
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
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|
| 149 | 150 |
scientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",
|
| 150 | 151 |
scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
| 151 | 152 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
| 152 | 153 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
| 153 | 154 |
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
| 154 |
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
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|
| 155 | 155 |
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
|
| 156 | 156 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
| 157 | 157 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
| ... | ... | |
| 160 | 160 |
forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2",
|
| 161 | 161 |
cultivar,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""cult. ""]/2",
|
| 162 | 162 |
scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
|
| 163 |
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept:[@fkey=canon_taxonconcept_id],else/.}/morphospecies",
|
|
| 164 |
verbatimScientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept:[@fkey=canon_taxonconcept_id]}/identifyingtaxonomicname",
|
|
| 163 | 165 |
acceptedScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/author, |
| 164 | 166 |
acceptedClass,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/class, |
| 165 | 167 |
acceptedCultivar,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_set_canon_taxonconcept/canon_taxonconcept_id/taxonconcept/cultivar, |
| ... | ... | |
| 200 | 202 |
forma,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/forma, |
| 201 | 203 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 202 | 204 |
kingdom,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/kingdom, |
| 203 |
morphospecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/morphospecies, |
|
| 204 | 205 |
order,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/order, |
| 205 | 206 |
phylum,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/phylum, |
| 206 | 207 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| ... | ... | |
| 208 | 209 |
infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
| 209 | 210 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then", |
| 210 | 211 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/subspecies/_alt/2/_join_words/2, |
| 211 |
verbatimScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/identifyingtaxonomicname, |
|
| 212 | 212 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
| 213 | 213 |
scientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicnamewithauthor, |
| 214 | 214 |
variety,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/variety, |
| mappings/for_review/VegCore-VegBIEN.csv | ||
|---|---|---|
| 146 | 146 |
class,//*_id/taxonconcept/taxon_id[rank=class]/taxonname, |
| 147 | 147 |
phylum,//*_id/taxonconcept/taxon_id[rank=phylum]/taxonname, |
| 148 | 148 |
kingdom,//*_id/taxonconcept/taxon_id[rank=kingdom]/taxonname, |
| 149 |
morphospecies,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
|
| 149 | 150 |
scientificNameWithAuthorship,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 150 | 151 |
scientificName,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 151 | 152 |
family,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 152 | 153 |
genus,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 153 | 154 |
specificEpithet,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 154 |
morphospecies,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
|
| 155 | 155 |
subspecies,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 156 | 156 |
infraspecificEpithet,"//*_id/taxonconcept/_if/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname/_if[@name=""if has infraspecificEpithet""]/cond",
|
| 157 | 157 |
taxonRank,"//*_id/taxonconcept/_if/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname/_if[@name=""if has infraspecificEpithet""]/then",
|
| ... | ... | |
| 160 | 160 |
forma,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 161 | 161 |
cultivar,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 162 | 162 |
scientificNameAuthorship,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/.,else/canon_taxonconcept_id/taxonconcept}/identifyingtaxonomicname",
|
| 163 |
morphospecies,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept,else/.}/morphospecies",
|
|
| 164 |
verbatimScientificNameWithAuthorship,"//*_id/taxonconcept/_if[@name=""if has verbatim name""]/{then/taxonconcept}/identifyingtaxonomicname",
|
|
| 163 | 165 |
acceptedScientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/author, |
| 164 | 166 |
acceptedClass,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/class, |
| 165 | 167 |
acceptedCultivar,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/cultivar, |
| ... | ... | |
| 200 | 202 |
forma,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/forma, |
| 201 | 203 |
genus,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/genus, |
| 202 | 204 |
kingdom,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/kingdom, |
| 203 |
morphospecies,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/morphospecies, |
|
| 204 | 205 |
order,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/order, |
| 205 | 206 |
phylum,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/phylum, |
| 206 | 207 |
specificEpithet,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/species, |
| ... | ... | |
| 208 | 209 |
infraspecificEpithet,"//taxonconcept/subspecies/_if[@name=""if has infraspecificEpithet""]/cond", |
| 209 | 210 |
taxonRank,"//taxonconcept/subspecies/_if[@name=""if has infraspecificEpithet""]/then", |
| 210 | 211 |
infraspecificEpithet,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/subspecies, |
| 211 |
verbatimScientificNameWithAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/identifyingtaxonomicname, |
|
| 212 | 212 |
scientificName,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonomicname, |
| 213 | 213 |
scientificNameWithAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonomicnamewithauthor, |
| 214 | 214 |
variety,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/variety, |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: In TNRS mode, remapped morphospecies (Unmatched_terms) to the input name's taxonconcept, because this does not relate to the matched taxon concept