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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5242 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Renamed datasource_id to c...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5262 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonconcept: Renamed morp...
  lib 5239 over 12 years Aaron Marcuse-Kubitza sql_io.py: put_table(): Resolve default value c...
  mappings 5262 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonconcept: Renamed morp...
  schemas 5262 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonconcept: Renamed morp...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 over 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 13 KB 5227 over 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Moved "update the f...
map 989 Bytes 5158 over 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5262 10/05/2012 06:45 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: Renamed morphospecies to taxonname since it's used in the same way as taxon.taxonname: to store the lowest-rank portion of the taxonomic name, such as the morphospecies suffix

5261 10/05/2012 06:21 PM Aaron Marcuse-Kubitza

inputs/.TNRS/tnrs/map.csv: Mapped *_matched terms that are both matched in the input name and which correspond to the matched taxonconcept (Genus_matched, Specific_epithet_matched, etc.) to both the input and matched taxonconcepts

5260 10/05/2012 06:09 PM Aaron Marcuse-Kubitza

inputs/.TNRS/tnrs/map.csv: Mapped terms matched in the original string (rather than deduced from the matched taxonconcept) to new verbatim* taxonomic terms

5259 10/05/2012 06:03 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped verbatim* taxonomic terms to the TNRS input taxonconcept

5258 10/05/2012 05:48 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: TNRS input taxonconcept: Split single _if statement controlling where morphospecies goes into two _if statements for each case, so that other verbatim* terms don't need to have an _if statement in their mapping to the input taxonconcept

5257 10/05/2012 05:29 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Added back verbatim* taxonomic terms, which will now be used for the TNRS input taxonconcept. Note that they will have a different meaning than the original* taxonomic terms that they were renamed to in r5062.

5256 10/05/2012 05:22 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: In TNRS mode, remapped morphospecies (Unmatched_terms) to the input name's taxonconcept, because this does not relate to the matched taxon concept

5255 10/05/2012 05:12 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: TNRS-only mappings: Switch them on when verbatimScientificNameWithAuthorship is provided rather than when acceptedScientificNameWithAuthorship is provided, because it's the presence of a separate TNRS input name that really determines when TNRS is being mapped

5254 10/05/2012 05:07 PM Aaron Marcuse-Kubitza

Makefiles: .last_cleanup targets: Also make the file that's being cleaned up .PRECIOUS so it doesn't get deleted if the .last_cleanup target has an error

5253 10/05/2012 05:04 PM Aaron Marcuse-Kubitza

Makefiles: .last_cleanup targets: Make each individual target .PRECIOUS (don't delete on error) because just making %.last_cleanup precious doesn't seem to prevent deletion

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