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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5242 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Renamed datasource_id to c...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5272 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Remapped taxon hi...
  lib 5266 about 12 years Aaron Marcuse-Kubitza sql_gen.py: null_sentinels: Added 'unknown' for...
  mappings 5272 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Remapped taxon hi...
  schemas 5271 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Fixed bug where taxonconce...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 over 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 13 KB 5227 about 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Moved "update the f...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5272 10/05/2012 08:38 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Remapped taxon hierarchy for accepted taxonconcepts to taxonconcept parent_id hierarchy

5271 10/05/2012 08:12 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Fixed bug where taxonconcept.parent_id was missing a foreign key constraint

5270 10/05/2012 08:10 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: Changed instructions for including a taxon name at a rank with no explicit column to create a parent taxonconcept for it and point to it using parent_id instead of using otherranks. Removed no longer used otherranks field.

5269 10/05/2012 08:05 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: taxonconcept_required_key check constraint: Added taxonname

5268 10/05/2012 07:58 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: taxonconcept_unique_within_creator_by_name unique index: Removed duplicate entry for creator_id

5267 10/05/2012 07:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: Added parent_id to point to the parent taxonconcept

5266 10/05/2012 07:56 PM Aaron Marcuse-Kubitza

sql_gen.py: null_sentinels: Added 'unknown' for taxonrank

5265 10/05/2012 07:44 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonrank: Added 'unknown'

5264 10/05/2012 07:30 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Also map *taxonRank to taxonconcept.rank, so that if it's in the taxonrank enum, it will automatically populate this field

5263 10/05/2012 07:14 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Remapped *infraspecificEpithet to new taxonconcept.taxonname rather than placing it in subspecies prefixed with the taxonRank, because it isn't necessarily the subspecies and because taxonname is defined to contain the lowest-rank portion of the taxonomic name. Note that when both morphospecies and infraspecificEpithet are provided, infraspecificEpithet takes priority for the taxonname field, because if TNRS leaves unmatched terms (which are tentatively mapped to morphospecies) but also matches an infraspecificEpithet, then the unmatched terms can't be for a morphospecies (because an infraspecificEpithet and therefore also a specificEpithet was matched, so the species is definite and formally named).

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