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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5242 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Renamed datasource_id to c...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5295 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: taxonconcepts: Al...
  lib 5289 about 12 years Aaron Marcuse-Kubitza sql_io.py: put_table(): Resolving default value...
  mappings 5295 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: taxonconcepts: Al...
  schemas 5296 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonconcept: Merged taxon...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.99 KB 4752 over 12 years Aaron Marcuse-Kubitza root Makefile: PostgreSQL: postgres-Linux: Adde...
README.TXT 13 KB 5227 about 12 years Aaron Marcuse-Kubitza README.TXT: Schema changes: Moved "update the f...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5296 10/08/2012 05:36 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: Merged taxonconcept_unique_within_creator_by_name unique index into taxonconcept_unique_within_parent, placed parent_id first, and removed index condition, so that this index can be used as a lookup index by taxonconcept_update_ancestors() (which requires no index condition in order to apply to all taxonconcepts) in addition to as a unique index. Note that an index condition should not be necessary for the index's uniquifying task, because if a set of taxonconcepts provides only the identifyingtaxonomicname, that should collide in the taxonconcept_unique_within_creator_by_identifying_name unique index before this index collides. This assumes that the collision order when multiple indexes collide is alphabetical by the index name.

5295 10/08/2012 04:47 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonconcepts: Also create the taxonconcept tree for taxonconcepts created from original*, verbatim*, and accepted* taxonomic terms

5294 10/08/2012 04:35 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonconcepts: Also create the taxonconcept tree if datasource provided separated components of the taxonomic name and/or its own tree of life with higher classifications. This enables storing the datasource's own tree of life to supplement any official tree (TROPICOS, USDA, etc.).

5293 10/08/2012 04:25 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: taxonconcept tree: Don't map infraspecificEpithet+taxonRank to a taxonconcept in the tree of parent concepts because it has already been mapped to the primary, lowest-level taxonconcept

5292 10/08/2012 04:00 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept: taxonconcept_unique_within_creator_by_name unique index: Fixed bug where index filter overlapped with taxonconcept_unique_within_parent's index filter, causing these unique indexes to sometimes both apply at the same time and prevent column-based import from correctly choosing which index to use for each taxonconcept import

5291 10/08/2012 01:15 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Fixed lines

5290 10/08/2012 01:02 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonconcept.canon_taxonconcept_id comment: Changed comment to use "concept" rather than "name" where applicable. Documented that a synonym between taxonconcepts of different sources is indicated by choosing one taxonconcept to be authoritative and pointing the other taxonconcept to it using this field.

5289 10/05/2012 10:52 PM Aaron Marcuse-Kubitza

sql_io.py: put_table(): Resolving default value column: Fixed bug where the default value col needed to have its table changed from in_table to full_in_table if it's a table column, and needed to have any column rename removed if it's a literal value

5288 10/05/2012 10:29 PM Aaron Marcuse-Kubitza

Regenerated vegbien.ERD exports

5287 10/05/2012 10:28 PM Aaron Marcuse-Kubitza

schemas/vegbien.ERD.mwb: Fixed lines

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