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Revision 5339

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/VegCore-VegBIEN.csv: verbatim* taxonconcept: Don't store Name_submitted in taxonomicnamewithauthor in addition to identifyingtaxonomicname, because the fields other than identifyingtaxonomicname are meant to store parsed values rather than raw, unscrubbed values and TNRS does not directly provide a concatenated taxonomic name with author

View differences:

inputs/.TNRS/tnrs/VegBIEN.csv
41 41 
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
42 42 
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonname/_if[@name=""if has verbatim name""]/then",
43 43 
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonomicname,
44 
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonomicnamewithauthor,
45 44 
Infraspecific_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/verbatimrank,
46 45 
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
47 46 
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonname/_if[@name=""if has verbatim name""]/else",
inputs/.TNRS/tnrs/test.xml.ref
159 159 
                                        <species>$Specific_epithet_matched</species>
160 160 
                                        <taxonname>$Unmatched_terms</taxonname>
161 161 
                                        <taxonomicname>$Name_matched</taxonomicname>
162 
                                        <taxonomicnamewithauthor>$Name_submitted</taxonomicnamewithauthor>
163 162 
                                        <verbatimrank>$Infraspecific_rank</verbatimrank>
164 163 
                                    </taxonconcept>
165 164 
                                    <taxonomicname>$Name_matched</taxonomicname>
mappings/VegCore-VegBIEN.csv
209 209 
verbatimScientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
210 210 
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonname/_if[@name=""if has verbatim name""]/then",
211 211 
verbatimScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonomicname,
212 
verbatimScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/taxonomicnamewithauthor,
213 212 
verbatimTaxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_taxonconcept_id]/verbatimrank,
214 213 
verbatimScientificNameWithAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
215 214 
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonname/_if[@name=""if has verbatim name""]/else",
mappings/for_review/VegCore-VegBIEN.csv
209 209 
verbatimScientificNameWithAuthorship,"//taxonconcept/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
210 210 
morphospecies,"//taxonconcept/taxonname/_if[@name=""if has verbatim name""]/then",
211 211 
verbatimScientificName,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/taxonomicname,
212 
verbatimScientificNameWithAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/taxonomicnamewithauthor,
213 212 
verbatimTaxonRank,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/verbatimrank,
214 213 
verbatimScientificNameWithAuthorship,"//taxonconcept/taxonname/_if[@name=""if has verbatim name""]/cond/_exists",
215 214 
morphospecies,"//taxonconcept/taxonname/_if[@name=""if has verbatim name""]/else",

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