Project

General

Profile

1
# XML-database conversion
2

    
3
import copy
4
import re
5
from xml.dom import Node
6

    
7
import dicts
8
import exc
9
import Parser
10
import sql
11
import sql_io
12
import sql_gen
13
import strings
14
import util
15
import xml_dom
16
import xml_func
17
import xpath
18

    
19
def name_of(node): return re.sub(r'^.*\.', r'', node.tagName)
20

    
21
ptr_suffix = '_id'
22

    
23
def is_ptr(node_name): return node_name.lower().endswith(ptr_suffix)
24

    
25
def ptr_type_guess(node_name):
26
    assert is_ptr(node_name)
27
    return node_name[:-len(ptr_suffix)]
28

    
29
def ptr_target(node):
30
    assert is_ptr(name_of(node))
31
    return xml_dom.value_node(node)
32

    
33
def find_by_name(node, name):
34
    for parent in xml_dom.NodeParentIter(node):
35
        if name_of(parent) == name: return parent
36
        else:
37
            for child in xml_dom.NodeElemIter(parent):
38
                child_name = name_of(child)
39
                if is_ptr(child_name):
40
                    target = ptr_target(child)
41
                    if target.tagName == name: return target
42
                elif child_name == name: return child
43
    return None
44

    
45
class ColRef:
46
    '''A reference to a table column'''
47
    def __init__(self, name, idx):
48
        self.name = name
49
        self.idx = idx
50
    
51
    def __str__(self): return self.name
52

    
53
input_col_prefix = xml_func.var_name_prefix
54

    
55
put_special_funcs = set(['_simplifyPath'])
56

    
57
def put(db, node, row_ins_ct_ref=None, on_error=exc.reraise,
58
    col_defaults={}, in_table=None, parent_ids_loc=None, next=None):
59
    '''
60
    @param node To use an entire XML document, pass root.firstChild.
61
    '''
62
    if node == None: return None # when no rows, root.firstChild == None
63
    
64
    def put_(node):
65
        return put(db, node, row_ins_ct_ref, on_error, col_defaults, in_table,
66
            parent_ids_loc, next)
67
    
68
    def augment_error(e): exc.add_msg(e, 'node:\n'+strings.ustr(node))
69
    def on_error_(e):
70
        augment_error(e)
71
        on_error(e)
72
    
73
    def wrap_e(e):
74
        augment_error(e)
75
        raise xml_func.SyntaxError(e)
76
    
77
    is_func = xml_func.is_func(node)
78
    out_table = name_of(node)
79
    
80
    # Divide children into fields and children with fkeys to parent
81
    row = dicts.OnceOnlyDict()
82
    children = []
83
    try:
84
        for child in xml_dom.NodeElemIter(node):
85
            child_name = name_of(child)
86
            if xml_dom.is_empty(child): row[child_name] = None
87
            elif xml_dom.is_text(child):
88
                row[child_name] = strings.to_unicode(xml_dom.value(child))
89
            else:
90
                child_value = xml_dom.value_node(child)
91
                if (is_func or is_ptr(child_name)
92
                    or xml_func.is_func(child_value)):
93
                    row[child_name] = child_value
94
                else: children.append(child)
95
    except dicts.KeyExistsError, e: wrap_e(e)
96
    
97
    # Special handling for structural XML functions
98
    if out_table == '_simplifyPath':
99
        # Parse args
100
        try:
101
            next = row['next'] # modifies outer next var used by put_()
102
            path = row['path']
103
        except KeyError, e: wrap_e(e)
104
        try: next = xpath.parse(next)
105
        except Parser.SyntaxError, e: wrap_e(e)
106
        try: next = next[0].name
107
        except IndexError, e: wrap_e(e)
108
        
109
        return put_(path)
110
    
111
    is_literals = in_table == None
112
    in_tables = []
113
    no_empty = set()
114
    if not is_literals:
115
        in_tables.append(in_table)
116
        no_empty.add(in_table)
117
    
118
    def pkey(table): return sql.pkey(db, table, True)
119
    
120
    # Add fkey to parent
121
    if parent_ids_loc != None:
122
        if sql_gen.is_table_col(parent_ids_loc):
123
            no_empty.add(parent_ids_loc.table)
124
        parent_ptr = node.getAttribute('fkey')
125
        if parent_ptr == '': parent_ptr = pkey(name_of(node.parentNode))
126
        row[parent_ptr] = parent_ids_loc
127
    
128
    # Parse input columns
129
    row = row.inner # now allow keys to be overwritten
130
    for out_col, value in row.iteritems():
131
        if (not is_literals and util.is_str(value)
132
            and value.startswith(input_col_prefix)): # value is input column
133
            row[out_col] = sql_gen.Col(strings.remove_prefix(input_col_prefix,
134
                value), in_table)
135
    
136
    # Optimizations for structural XML functions
137
    if out_table == '_alt': # return first arg if non-NULL
138
        args = row.items()
139
        args.sort()
140
        out_col, value = min(args) # first arg
141
        if xml_dom.is_node(value): row[out_col] = value = put_(value)
142
        if not sql_gen.is_nullable(db, value): return value
143
    
144
    # Process values
145
    parent_ids_loc = None # applies to this section
146
    for out_col, value in row.iteritems():
147
        # Handle forward pointers
148
        if xml_dom.is_node(value): row[out_col] = value = put_(value)
149
        
150
        # Translate values
151
        if isinstance(value, sql_gen.Col): # value is table column
152
            assert sql_gen.is_table_col(value)
153
            if value.table is not in_table: in_tables.append(value.table)
154
        else: # value is literal value
155
            row[out_col] = sql_gen.NamedCol(out_col, value)
156
    
157
    # Insert node
158
    try: pkeys_loc = sql_io.put_table(db, out_table, in_tables, row,
159
        row_ins_ct_ref, next, col_defaults, on_error_)
160
    except Exception, e:
161
        augment_error(e)
162
        raise
163
    
164
    sql.empty_temp(db, set(in_tables) - no_empty)
165
    
166
    # Insert children with fkeys to parent
167
    parent_ids_loc = pkeys_loc # applies to this section
168
    for child in children: put_(child)
169
    
170
    return pkeys_loc
171

    
172
def get(db, node, limit=None, start=None):
173
    def pkey(table): return sql.pkey(db, table)
174
    
175
    node = node.firstChild
176
    table = name_of(node)
177
    pkey_ = pkey(table)
178
    
179
    fields = []
180
    conds = {}
181
    for child in xml_dom.NodeElemIter(node):
182
        child_name = name_of(child)
183
        if xml_dom.is_empty(child): fields.append(child_name)
184
        elif xml_dom.is_text(child): conds[child_name] = xml_dom.value(child)
185
        else: raise Exception('Joins not supported yet')
186
    id_ = xml_dom.get_id(node)
187
    if id_ != None: conds[pkey(table)] = id_ # replace any existing pkey value
188
    if fields == []: fields.append(pkey_)
189
    
190
    return sql.select(db, table, fields, conds, limit, start)
191

    
192
# Controls when and how put_table() will partition the input table
193
partition_size = 500000 # rows
194

    
195
def put_table(db, node, in_table, in_row_ct_ref=None, row_ins_ct_ref=None,
196
    limit=None, start=0, on_error=exc.reraise, col_defaults={},
197
    partition_size=partition_size):
198
    '''
199
    @param node The XML tree that transforms the input to the output. Similar to
200
        put()'s node param, but with the input column name prefixed by
201
        input_col_prefix in place of the column value.
202
    @return sql_gen.Col Where the pkeys (from INSERT RETURNING) are made
203
        available
204
    '''
205
    in_table = sql_gen.as_Table(in_table)
206
    sql_io.mk_errors_table(db, in_table)
207
    in_table.set_srcs([in_table], overwrite=False)
208
    db.src = strings.ustr(in_table)
209
    
210
    db.autoanalyze = True # but don't do this in row-based import
211
    db.autoexplain = True # but don't do this in row-based import
212
    
213
    # Subset and partition in_table
214
    # OK to do even if table already the right size because it takes <1 sec.
215
    full_in_table = in_table
216
    pkeys_loc = None # used if loop is never executed
217
    total = 0
218
    while limit == None or total < limit:
219
        # Adjust partition size if last partition
220
        this_limit = partition_size
221
        if limit != None: this_limit = min(this_limit, limit - total)
222
        
223
        # Row # is interally 0-based, but 1-based to the user
224
        db.log_debug('********** Partition: rows '+str(start+1)+'-'
225
            +str(start+this_limit)+' **********', level=1.2)
226
        
227
        # Subset in_table
228
        in_table = sql_gen.Table(strings.ustr(full_in_table),
229
            srcs=full_in_table.srcs, is_temp=True) # prepend schema to name
230
        sql.copy_table_struct(db, full_in_table, in_table)
231
        try: sql.add_row_num(db, in_table, sql.pkey_col)
232
        except sql.DatabaseErrors: pass # already has pkey
233
        cur = sql.insert_select(db, in_table, None, sql.mk_select(db,
234
            full_in_table, limit=this_limit, start=start, order_by=None))
235
        
236
        this_ct = cur.rowcount
237
        total += this_ct
238
        start += this_ct # advance start to fetch next set
239
        if this_ct == 0: break # in_table size is multiple of partition_size
240
        
241
        # Import data
242
        pkeys_loc = put(db, node, row_ins_ct_ref, on_error, col_defaults,
243
            in_table)
244
        if in_row_ct_ref != None: in_row_ct_ref[0] += this_ct
245
        
246
        sql.empty_temp(db, in_table)
247
        
248
        if this_ct < partition_size: break # partial partition = last
249
        
250
        # Work around PostgreSQL's temp table disk space leak
251
        db.reconnect()
252
    
253
    return pkeys_loc
(10-10/42)