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Revision 5410

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/VegCore-VegBIEN.csv: Use matchedFamilyFit_fraction as canon_concept_fit_fraction when greater than matchedTaxonFit_fraction, because if there is at least a matched family, there is a valid taxonconcept to attach to

View differences:

inputs/.TNRS/tnrs/VegBIEN.csv
34 34 
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank,
35 35 
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
36 36 
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/author,Contains author in original string
37 
Overall_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction,Assuming is a fraction based on the range of values
37 
Overall_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/1,Assuming is a fraction based on the range of values
38 38 
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/family,Contains family in original string (uncommon)
39 39 
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/genus,
40 40 
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/identifyingtaxonomicname,
mappings/VegCore-VegBIEN.csv
202 202 
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank,
203 203 
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
204 204 
verbatimScientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/author,
205 
matchedTaxonFit_fraction,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction,
205 
matchedTaxonFit_fraction,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/1,
206 
matchedFamilyFit_fraction,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/2,
206 207 
verbatimFamily,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/family,
207 208 
verbatimGenus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/genus,
208 209 
verbatimScientificNameWithAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/identifyingtaxonomicname,
mappings/for_review/VegCore-VegBIEN.csv
203 203 
specificEpithet,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/species,
204 204 
verbatimScientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/author,
205 205 
matchedTaxonFit_fraction,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/canon_concept_fit_fraction,
206 
matchedFamilyFit_fraction,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/canon_concept_fit_fraction,
206 207 
verbatimFamily,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/family,
207 208 
verbatimGenus,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/genus,
208 209 
verbatimScientificNameWithAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/taxonconcept/identifyingtaxonomicname,

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