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Revision 5421

Added by Aaron Marcuse-Kubitza over 12 years ago

inputs/.TNRS/tnrs/map.csv: Mapped Genus_score, Specific_epithet_score

View differences:

inputs/.TNRS/tnrs/map.csv
15 15 
Name_matched_accepted_family,family,,Contains family based on matched name
16 16 
Genus_matched,verbatimGenus,,
17 17 
Genus_matched,genus,,
18 
Genus_score,*Genus_score,,
18 
Genus_score,matchedGenusFit_fraction,,
19 19 
Specific_epithet_matched,verbatimSpecificEpithet,,
20 20 
Specific_epithet_matched,specificEpithet,,
21 
Specific_epithet_score,*Specific_epithet_score,,
21 
Specific_epithet_score,matchedSpeciesFit_fraction,,
22 22 
Infraspecific_rank,verbatimTaxonRank,,
23 23 
Infraspecific_epithet_matched,verbatimInfraspecificEpithet,,
24 24 
Infraspecific_epithet_matched,infraspecificEpithet,,
inputs/.TNRS/tnrs/VegBIEN.csv
35 35 
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
36 36 
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/author,Contains author in original string
37 37 
Family_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/1,
38 
Genus_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/2,
39 
Specific_epithet_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/3,
38 40 
Overall_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/canon_concept_fit_fraction/_max/4,Assuming is a fraction based on the range of values
39 41 
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/family,Contains family in original string (uncommon)
40 42 
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=canon_concept_id]/genus,
......
53 55 
Accepted_name_url,,** No join mapping for *Accepted_name_url **
54 56 
Annotations,,** No join mapping for *Annotations **
55 57 
Author_score,,** No join mapping for *Author_score **
56 
Genus_score,,** No join mapping for *Genus_score **
57 58 
Infraspecific_epithet_2_matched,,** No non-empty join mapping for UNUSED **
58 59 
Infraspecific_epithet_2_score,,** No non-empty join mapping for UNUSED **
59 60 
Infraspecific_epithet_matched,,** No join mapping for verbatimInfraspecificEpithet **
......
64 65 
Name_score,,** No join mapping for *Name_score **
65 66 
Selected,,** No join mapping for *Selected **
66 67 
Source,,** No join mapping for *Source **
67 
Specific_epithet_score,,** No join mapping for *Specific_epithet_score **
68 68 
Taxonomic_status,,** No join mapping for taxonomicStatus **
69 69 
Warnings,,** No join mapping for *Warnings **
inputs/.TNRS/tnrs/test.xml.ref
156 156 
                                        <canon_concept_fit_fraction>
157 157 
                                            <_max>
158 158 
                                                <1>$Family_score</1>
159 
                                                <2>$Genus_score</2>
160 
                                                <3>$Specific_epithet_score</3>
159 161 
                                                <4>$Overall_score</4>
160 162 
                                            </_max>
161 163 
                                        </canon_concept_fit_fraction>
inputs/.TNRS/tnrs/new_terms.csv
11 11 
Name_matched_accepted_family,family,,Contains family based on matched name
12 12 
Genus_matched,verbatimGenus,,
13 13 
Genus_matched,genus,,
14 
Genus_score,matchedGenusFit_fraction,,
14 15 
Specific_epithet_matched,verbatimSpecificEpithet,,
15 16 
Specific_epithet_matched,specificEpithet,,
17 
Specific_epithet_score,matchedSpeciesFit_fraction,,
16 18 
Infraspecific_rank,verbatimTaxonRank,,
17 19 
Infraspecific_epithet_matched,verbatimInfraspecificEpithet,,
18 20 
Infraspecific_epithet_matched,infraspecificEpithet,,
inputs/.TNRS/tnrs/unmapped_terms.csv
1 1 
*Name_score
2 2 
*Name_matched_url
3 3 
*Author_score
4 
*Genus_score
5 
*Specific_epithet_score
6 4 
verbatimInfraspecificEpithet
7 5 
*Infraspecific_epithet_score
8 6 
*Annotations

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