Revision 5487
Added by Aaron Marcuse-Kubitza about 12 years ago
| inputs/UNCC/Specimen/VegBIEN.csv | ||
|---|---|---|
| 54 | 54 |
authors,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author, |
| 55 | 55 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 56 | 56 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 57 |
usdaRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank/_alt/1", |
|
| 58 |
infrarank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank/_alt/2", |
|
| 59 |
usdaRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank/_alt/1", |
|
| 60 |
infrarank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank/_alt/2", |
|
| 57 | 61 |
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 58 | 62 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 59 | 63 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname", |
| 60 |
usdaRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank/_alt/1, |
|
| 61 |
infrarank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank/_alt/2, |
|
| 62 | 64 |
infraname,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 63 |
usdaRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank/_alt/1, |
|
| 64 |
infrarank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank/_alt/2, |
|
| 65 | 65 |
usdaRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank/_alt/1, |
| 66 | 66 |
infrarank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank/_alt/2, |
| 67 | 67 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| inputs/UNCC/Specimen/test.xml.ref | ||
|---|---|---|
| 120 | 120 |
<genus>$genus</genus> |
| 121 | 121 |
<parent_id> |
| 122 | 122 |
<taxonconcept> |
| 123 |
<rank> |
|
| 124 |
<_alt> |
|
| 125 |
<1>$usdaRank</1> |
|
| 126 |
<2>$infrarank</2> |
|
| 127 |
</_alt> |
|
| 128 |
</rank> |
|
| 129 |
<verbatimrank> |
|
| 130 |
<_alt> |
|
| 131 |
<1>$usdaRank</1> |
|
| 132 |
<2>$infrarank</2> |
|
| 133 |
</_alt> |
|
| 134 |
</verbatimrank> |
|
| 123 | 135 |
<parent_id> |
| 124 | 136 |
<taxonconcept> |
| 125 | 137 |
<rank>cultivar</rank> |
| ... | ... | |
| 158 | 170 |
</parent_id> |
| 159 | 171 |
</taxonconcept> |
| 160 | 172 |
</parent_id> |
| 161 |
<rank> |
|
| 162 |
<_alt> |
|
| 163 |
<1>$usdaRank</1> |
|
| 164 |
<2>$infrarank</2> |
|
| 165 |
</_alt> |
|
| 166 |
</rank> |
|
| 167 | 173 |
<taxonname>$infraname</taxonname> |
| 168 |
<verbatimrank> |
|
| 169 |
<_alt> |
|
| 170 |
<1>$usdaRank</1> |
|
| 171 |
<2>$infrarank</2> |
|
| 172 |
</_alt> |
|
| 173 |
</verbatimrank> |
|
| 174 | 174 |
</taxonconcept> |
| 175 | 175 |
</parent_id> |
| 176 | 176 |
<rank> |
| inputs/ACAD/Specimen/VegBIEN.csv | ||
|---|---|---|
| 36 | 36 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/surname/_namePart/last, |
| 37 | 37 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 38 | 38 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 39 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 40 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 39 | 41 |
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 40 | 42 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 41 | 43 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname", |
| ... | ... | |
| 43 | 45 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonname", |
| 44 | 46 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonname", |
| 45 | 47 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonname", |
| 46 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 47 | 48 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 48 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 49 | 49 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 50 | 50 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 51 | 51 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicnamewithauthor, |
| inputs/ACAD/Specimen/test.xml.ref | ||
|---|---|---|
| 130 | 130 |
<genus>$genus</genus> |
| 131 | 131 |
<parent_id> |
| 132 | 132 |
<taxonconcept> |
| 133 |
<rank>$taxonRank</rank> |
|
| 134 |
<verbatimrank>$taxonRank</verbatimrank> |
|
| 133 | 135 |
<parent_id> |
| 134 | 136 |
<taxonconcept> |
| 135 | 137 |
<rank>cultivar</rank> |
| ... | ... | |
| 192 | 194 |
</parent_id> |
| 193 | 195 |
</taxonconcept> |
| 194 | 196 |
</parent_id> |
| 195 |
<rank>$taxonRank</rank> |
|
| 196 | 197 |
<taxonname>$infraspecificEpithet</taxonname> |
| 197 |
<verbatimrank>$taxonRank</verbatimrank> |
|
| 198 | 198 |
</taxonconcept> |
| 199 | 199 |
</parent_id> |
| 200 | 200 |
<rank>$taxonRank</rank> |
| inputs/SALVIAS-CSV/Organism/VegBIEN.csv | ||
|---|---|---|
| 74 | 74 |
specific_authority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Brad: This is the author of the scientificName. |
| 75 | 75 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 76 | 76 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 77 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 78 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 77 | 79 |
specific_epithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 78 | 80 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 79 | 81 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname", |
| 80 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 81 | 82 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 82 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 83 | 83 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 84 | 84 |
specific_epithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 85 | 85 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/verbatimrank, |
| inputs/SALVIAS-CSV/Organism/test.xml.ref | ||
|---|---|---|
| 185 | 185 |
<genus>$genus</genus> |
| 186 | 186 |
<parent_id> |
| 187 | 187 |
<taxonconcept> |
| 188 |
<rank>$infra_rank_1</rank> |
|
| 189 |
<verbatimrank>$infra_rank_1</verbatimrank> |
|
| 188 | 190 |
<parent_id> |
| 189 | 191 |
<taxonconcept> |
| 190 | 192 |
<rank>cultivar</rank> |
| ... | ... | |
| 223 | 225 |
</parent_id> |
| 224 | 226 |
</taxonconcept> |
| 225 | 227 |
</parent_id> |
| 226 |
<rank>$infra_rank_1</rank> |
|
| 227 | 228 |
<taxonname>$infra_ep_1</taxonname> |
| 228 |
<verbatimrank>$infra_rank_1</verbatimrank> |
|
| 229 | 229 |
</taxonconcept> |
| 230 | 230 |
</parent_id> |
| 231 | 231 |
<rank>$infra_rank_1</rank> |
| inputs/SALVIAS/plotObservations/VegBIEN.csv | ||
|---|---|---|
| 67 | 67 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Brad: This is the author of the scientificName. |
| 68 | 68 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 69 | 69 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 70 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 71 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 70 | 72 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 71 | 73 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 72 | 74 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname", |
| 73 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 74 | 75 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 75 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 76 | 76 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 77 | 77 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 78 | 78 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/verbatimrank, |
| inputs/SALVIAS/plotObservations/test.xml.ref | ||
|---|---|---|
| 156 | 156 |
<genus>$Genus</genus> |
| 157 | 157 |
<parent_id> |
| 158 | 158 |
<taxonconcept> |
| 159 |
<rank>$infra_rank_1</rank> |
|
| 160 |
<verbatimrank>$infra_rank_1</verbatimrank> |
|
| 159 | 161 |
<parent_id> |
| 160 | 162 |
<taxonconcept> |
| 161 | 163 |
<rank>cultivar</rank> |
| ... | ... | |
| 194 | 196 |
</parent_id> |
| 195 | 197 |
</taxonconcept> |
| 196 | 198 |
</parent_id> |
| 197 |
<rank>$infra_rank_1</rank> |
|
| 198 | 199 |
<taxonname>$infra_ep_1</taxonname> |
| 199 |
<verbatimrank>$infra_rank_1</verbatimrank> |
|
| 200 | 200 |
</taxonconcept> |
| 201 | 201 |
</parent_id> |
| 202 | 202 |
<rank>$infra_rank_1</rank> |
| inputs/.TNRS/tnrs/VegBIEN.csv | ||
|---|---|---|
| 25 | 25 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Contains author based on matched name |
| 26 | 26 |
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,Contains family based on matched name |
| 27 | 27 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 28 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 29 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 28 | 30 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 29 | 31 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 30 | 32 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname",Contains family based on matched name |
| 31 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 32 | 33 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 33 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 34 | 34 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 35 | 35 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 36 | 36 |
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/author,Contains author in original string |
| inputs/.TNRS/tnrs/test.xml.ref | ||
|---|---|---|
| 106 | 106 |
<genus>$Genus_matched</genus> |
| 107 | 107 |
<parent_id> |
| 108 | 108 |
<taxonconcept> |
| 109 |
<rank>$Name_matched_rank</rank> |
|
| 110 |
<verbatimrank>$Name_matched_rank</verbatimrank> |
|
| 109 | 111 |
<parent_id> |
| 110 | 112 |
<taxonconcept> |
| 111 | 113 |
<rank>cultivar</rank> |
| ... | ... | |
| 144 | 146 |
</parent_id> |
| 145 | 147 |
</taxonconcept> |
| 146 | 148 |
</parent_id> |
| 147 |
<rank>$Name_matched_rank</rank> |
|
| 148 | 149 |
<taxonname>$Infraspecific_epithet_matched</taxonname> |
| 149 |
<verbatimrank>$Name_matched_rank</verbatimrank> |
|
| 150 | 150 |
</taxonconcept> |
| 151 | 151 |
</parent_id> |
| 152 | 152 |
<rank>$Name_matched_rank</rank> |
| inputs/QMOR/Specimen/VegBIEN.csv | ||
|---|---|---|
| 43 | 43 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/surname/_namePart/last, |
| 44 | 44 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 45 | 45 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 46 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 47 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 46 | 48 |
specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonname", |
| 47 | 49 |
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonname", |
| 48 | 50 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonname", |
| ... | ... | |
| 50 | 52 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonname", |
| 51 | 53 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonname", |
| 52 | 54 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonname", |
| 53 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 54 | 55 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 55 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 56 | 56 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 57 | 57 |
specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
| 58 | 58 |
scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
| inputs/QMOR/Specimen/test.xml.ref | ||
|---|---|---|
| 154 | 154 |
<genus>$genus</genus> |
| 155 | 155 |
<parent_id> |
| 156 | 156 |
<taxonconcept> |
| 157 |
<rank>$taxonRank</rank> |
|
| 158 |
<verbatimrank>$taxonRank</verbatimrank> |
|
| 157 | 159 |
<parent_id> |
| 158 | 160 |
<taxonconcept> |
| 159 | 161 |
<rank>cultivar</rank> |
| ... | ... | |
| 216 | 218 |
</parent_id> |
| 217 | 219 |
</taxonconcept> |
| 218 | 220 |
</parent_id> |
| 219 |
<rank>$taxonRank</rank> |
|
| 220 | 221 |
<taxonname>$infraspecificEpithet</taxonname> |
| 221 |
<verbatimrank>$taxonRank</verbatimrank> |
|
| 222 | 222 |
</taxonconcept> |
| 223 | 223 |
</parent_id> |
| 224 | 224 |
<rank>$taxonRank</rank> |
| mappings/VegCore-VegBIEN.csv | ||
|---|---|---|
| 185 | 185 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/surname/_namePart/last, |
| 186 | 186 |
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
| 187 | 187 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
| 188 |
parentScientificNameID,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 189 |
parentTaxonConceptID,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 190 |
parentTaxonID,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 191 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 192 |
taxonRank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 188 | 193 |
cultivar,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=cultivar]/taxonname", |
| 189 | 194 |
forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=forma]/taxonname", |
| 190 | 195 |
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=variety]/taxonname", |
| ... | ... | |
| 196 | 201 |
class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonname", |
| 197 | 202 |
phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonname", |
| 198 | 203 |
kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonname", |
| 199 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 200 | 204 |
parentScientificNameID,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 201 | 205 |
parentTaxonConceptID,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 202 | 206 |
parentTaxonID,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 203 | 207 |
infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 204 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 205 | 208 |
taxonRank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank, |
| 206 | 209 |
scientificNameID,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/sourceaccessioncode, |
| 207 | 210 |
taxonConceptID,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/sourceaccessioncode, |
| mappings/for_review/VegCore-VegBIEN.csv | ||
|---|---|---|
| 185 | 185 |
identifiedBy,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/creator_id/party/surname, |
| 186 | 186 |
family,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/family, |
| 187 | 187 |
genus,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/genus, |
| 188 |
parentScientificNameID,"//parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 189 |
parentTaxonConceptID,"//parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 190 |
parentTaxonID,"//parent_id/taxonconcept/_if[@name=""if has explicit parent""]/cond/_exists", |
|
| 191 |
taxonRank,"//parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank", |
|
| 192 |
taxonRank,"//parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank", |
|
| 188 | 193 |
cultivar,//taxonconcept/parent_id[rank=cultivar]/taxonname, |
| 189 | 194 |
forma,//taxonconcept/parent_id[rank=forma]/taxonname, |
| 190 | 195 |
variety,//taxonconcept/parent_id[rank=variety]/taxonname, |
| ... | ... | |
| 196 | 201 |
class,//taxonconcept/parent_id[rank=class]/taxonname, |
| 197 | 202 |
phylum,//taxonconcept/parent_id[rank=phylum]/taxonname, |
| 198 | 203 |
kingdom,//taxonconcept/parent_id[rank=kingdom]/taxonname, |
| 199 |
taxonRank,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/rank, |
|
| 200 | 204 |
parentScientificNameID,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 201 | 205 |
parentTaxonConceptID,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 202 | 206 |
parentTaxonID,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/sourceaccessioncode, |
| 203 | 207 |
infraspecificEpithet,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/taxonname, |
| 204 |
taxonRank,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/parent_id/taxonconcept/verbatimrank, |
|
| 205 | 208 |
taxonRank,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/rank, |
| 206 | 209 |
scientificNameID,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/sourceaccessioncode, |
| 207 | 210 |
taxonConceptID,//taxonoccurrence/taxondetermination[]/*_id/taxonconcept/sourceaccessioncode, |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Only forward taxonRank to the parent taxonconcept (which stores the infraspecific taxonconcept when the infraspecificEpithet is provided) if there is no explicit parent provided via parentTaxonID/etc.