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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5503 about 12 years Aaron Marcuse-Kubitza import_all: Also import the NCBI tree of life, ...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5509 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Renamed _set_matched_taxon...
  lib 5508 about 12 years Aaron Marcuse-Kubitza db_xml.py: put(): Treat a child node which is a...
  mappings 5509 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Renamed _set_matched_taxon...
  schemas 5510 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Added _taxonconcept_set_pa...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 about 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.86 KB 5459 about 12 years Aaron Marcuse-Kubitza Makefile: Moved setting of $(root) before inclu...
README.TXT 12.8 KB 5496 about 12 years Aaron Marcuse-Kubitza README.TXT: Documentation: To import and scrub ...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5510 10/15/2012 09:41 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added _taxonconcept_set_parent_id()

5509 10/15/2012 09:37 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Renamed _set_matched_taxonconcept() to _taxonconcept_set_matched_concept_id() so that the function name is prefixed with the table it applies to

5508 10/15/2012 09:35 AM Aaron Marcuse-Kubitza

db_xml.py: put(): Treat a child node which is a function (starts with _) as a child with fkey to parent rather than as a field in the table. Such a function accepts the table's pkey as one of its arguments.

5507 10/15/2012 09:05 AM Aaron Marcuse-Kubitza

sql_gen.py: map_expr(): Don't replace an unquoted name when followed by ",", as it would be in an into table name for a function with multiple arguments (e.g. family in "_join_words(1=Field family, 2=Field name)")

5506 10/15/2012 08:49 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: locationevent: Moved obsstartdate, obsenddate to top of table so they would be visible in the ERD

5505 10/15/2012 08:45 AM Aaron Marcuse-Kubitza

sql_io.py: put_table(): ensure_cond(): track_data_error(): Concatenate the columns in the constraint together using , rather than adding a separate entry for each column, because the constraint is applicable to all columns together rather than to each column separately

5504 10/15/2012 08:26 AM Aaron Marcuse-Kubitza

sql_io.py: put_table(): Renamed ignore_cond() to ensure_cond() for clarity

5503 10/15/2012 08:22 AM Aaron Marcuse-Kubitza

import_all: Also import the NCBI tree of life, before the TNRS names

5502 10/15/2012 08:17 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Also map acceptedFamily to the corresponding NCBI family

5501 10/15/2012 08:07 AM Aaron Marcuse-Kubitza

lib/PostgreSQL-MySQL.csv: custom types: Also exclude time. Reordered excluded (built-in) types by name.

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