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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5523 about 12 years Aaron Marcuse-Kubitza sql.select() calls: Removed order_by=None every...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5562 about 12 years Aaron Marcuse-Kubitza inputs/FIA/Organism/map.csv: Height: Remapped t...
  lib 5573 about 12 years Aaron Marcuse-Kubitza sql_io.py: append_csv(): Don't disable COPY FRO...
  mappings 5567 about 12 years Aaron Marcuse-Kubitza mappings/VegCore.csv: Removed unit-ambiguous he...
  schemas 5559 about 12 years Aaron Marcuse-Kubitza schemas/functions.sql: Added _ft_to_m()
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.86 KB 5459 about 12 years Aaron Marcuse-Kubitza Makefile: Moved setting of $(root) before inclu...
README.TXT 12.9 KB 5563 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: import_all: Added NCBI...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5573 10/17/2012 09:01 AM Aaron Marcuse-Kubitza

sql_io.py: append_csv(): Don't disable COPY FROM for TSVs, which are now supported using csvs.InputRewriter
5572 10/17/2012 08:59 AM Aaron Marcuse-Kubitza

sql_io.py: append_csv(): COPY FROM: Wrap provided stream in standardizing stream to fix ragged rows (with unequal # columns) and nonstandard CSV dialects (such as TSV with \-escaped newlines)
5571 10/17/2012 08:56 AM Aaron Marcuse-Kubitza

csvs.py: Added InputRewriter, which wraps a reader, writing each row back to CSV
5570 10/17/2012 08:54 AM Aaron Marcuse-Kubitza

csvs.py: Added ColCtFilter, which gives all rows the same # columns
5569 10/17/2012 07:25 AM Aaron Marcuse-Kubitza

sql_io.py: row_num_col_def: Changed type to integer so the row_num can be populated directly by the insert process
5568 10/17/2012 07:19 AM Aaron Marcuse-Kubitza

sql_io.py: Added row_num_col_def for use by import_csv(). The row_num column will be necessary again because PostgreSQL unfortunately does not return rows in inserted order (or any stable order: "If sorting is not chosen, the rows will be returned in an unspecified order [which] must not be relied on" <http://www.postgresql.org/docs/8.3/static/queries-order.html&gt;), so an explicit ORDER BY is always needed to ensure staging table rows are retrievable in the order they were inserted.
5567 10/16/2012 10:58 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Removed unit-ambiguous height. Use height_m, height_ft instead.
5566 10/16/2012 10:57 PM Aaron Marcuse-Kubitza

mappings/Veg+-VegCore.csv: Added height
5565 10/16/2012 10:57 PM Aaron Marcuse-Kubitza

mappings/Veg+-VegCore.csv: Added height
5564 10/16/2012 10:52 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Removed no longer used height mapping. Use height_m, height_ft instead.

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