|
1
|
Put template:
|
|
2
|
<VegBIEN>
|
|
3
|
<_simplifyPath id="-1">
|
|
4
|
<next>parent_id</next>
|
|
5
|
<path>
|
|
6
|
<location>
|
|
7
|
<locationevent>
|
|
8
|
<taxonoccurrence>
|
|
9
|
<taxondetermination>
|
|
10
|
<taxonconcept_id>
|
|
11
|
<taxonconcept>
|
|
12
|
<identifyingtaxonomicname>
|
|
13
|
<_join_words>
|
|
14
|
<1>
|
|
15
|
<_alt>
|
|
16
|
<1>$Name_matched</1>
|
|
17
|
<2>
|
|
18
|
<_join_words>
|
|
19
|
<1>$Name_matched_accepted_family</1>
|
|
20
|
<2>$Genus_matched</2>
|
|
21
|
<3>$Specific_epithet_matched</3>
|
|
22
|
<5>
|
|
23
|
<_join_words>
|
|
24
|
<1>
|
|
25
|
<_if name="if has infraspecificEpithet">
|
|
26
|
<cond>$Infraspecific_epithet_matched</cond>
|
|
27
|
<then>$Name_matched_rank</then>
|
|
28
|
</_if>
|
|
29
|
</1>
|
|
30
|
<2>$Infraspecific_epithet_matched</2>
|
|
31
|
</_join_words>
|
|
32
|
</5>
|
|
33
|
</_join_words>
|
|
34
|
</2>
|
|
35
|
</_alt>
|
|
36
|
</1>
|
|
37
|
<2>$Name_matched_author</2>
|
|
38
|
</_join_words>
|
|
39
|
</identifyingtaxonomicname>
|
|
40
|
<_taxonconcept_set_matched_concept_id>
|
|
41
|
<matched_concept_id>
|
|
42
|
<taxonconcept>
|
|
43
|
<author>$Accepted_name_author</author>
|
|
44
|
<family>$Accepted_name_family</family>
|
|
45
|
<identifyingtaxonomicname>
|
|
46
|
<_join_words>
|
|
47
|
<1>
|
|
48
|
<_alt>
|
|
49
|
<1>$Accepted_name</1>
|
|
50
|
<2>$Accepted_name_family</2>
|
|
51
|
</_alt>
|
|
52
|
</1>
|
|
53
|
<2>$Accepted_name_author</2>
|
|
54
|
</_join_words>
|
|
55
|
</identifyingtaxonomicname>
|
|
56
|
<parent_id>
|
|
57
|
<taxonconcept>
|
|
58
|
<parent_id>
|
|
59
|
<taxonconcept>
|
|
60
|
<rank>cultivar</rank>
|
|
61
|
<parent_id>
|
|
62
|
<taxonconcept>
|
|
63
|
<rank>forma</rank>
|
|
64
|
<parent_id>
|
|
65
|
<taxonconcept>
|
|
66
|
<rank>variety</rank>
|
|
67
|
<parent_id>
|
|
68
|
<taxonconcept>
|
|
69
|
<rank>subspecies</rank>
|
|
70
|
<parent_id>
|
|
71
|
<taxonconcept>
|
|
72
|
<rank>species</rank>
|
|
73
|
<parent_id>
|
|
74
|
<taxonconcept>
|
|
75
|
<rank>genus</rank>
|
|
76
|
<parent_id>
|
|
77
|
<taxonconcept>
|
|
78
|
<rank>family</rank>
|
|
79
|
<matched_concept_id>
|
|
80
|
<taxonconcept>
|
|
81
|
<creator_id>
|
|
82
|
<party>
|
|
83
|
<creator_id>0</creator_id>
|
|
84
|
<organizationname>NCBI</organizationname>
|
|
85
|
</party>
|
|
86
|
</creator_id>
|
|
87
|
<rank>family</rank>
|
|
88
|
<taxonepithet>$Accepted_name_family</taxonepithet>
|
|
89
|
</taxonconcept>
|
|
90
|
</matched_concept_id>
|
|
91
|
<taxonepithet>$Accepted_name_family</taxonepithet>
|
|
92
|
</taxonconcept>
|
|
93
|
</parent_id>
|
|
94
|
</taxonconcept>
|
|
95
|
</parent_id>
|
|
96
|
</taxonconcept>
|
|
97
|
</parent_id>
|
|
98
|
</taxonconcept>
|
|
99
|
</parent_id>
|
|
100
|
</taxonconcept>
|
|
101
|
</parent_id>
|
|
102
|
</taxonconcept>
|
|
103
|
</parent_id>
|
|
104
|
</taxonconcept>
|
|
105
|
</parent_id>
|
|
106
|
<rank>$Accepted_name_rank</rank>
|
|
107
|
<verbatimrank>$Accepted_name_rank</verbatimrank>
|
|
108
|
</taxonconcept>
|
|
109
|
</parent_id>
|
|
110
|
<rank>$Accepted_name_rank</rank>
|
|
111
|
<taxonomicname>$Accepted_name</taxonomicname>
|
|
112
|
<verbatimrank>$Accepted_name_rank</verbatimrank>
|
|
113
|
</taxonconcept>
|
|
114
|
</matched_concept_id>
|
|
115
|
</_taxonconcept_set_matched_concept_id>
|
|
116
|
<author>$Name_matched_author</author>
|
|
117
|
<family>$Name_matched_accepted_family</family>
|
|
118
|
<genus>$Genus_matched</genus>
|
|
119
|
<parent_id>
|
|
120
|
<taxonconcept>
|
|
121
|
<rank>$Name_matched_rank</rank>
|
|
122
|
<verbatimrank>$Name_matched_rank</verbatimrank>
|
|
123
|
<parent_id>
|
|
124
|
<taxonconcept>
|
|
125
|
<rank>cultivar</rank>
|
|
126
|
<parent_id>
|
|
127
|
<taxonconcept>
|
|
128
|
<rank>forma</rank>
|
|
129
|
<parent_id>
|
|
130
|
<taxonconcept>
|
|
131
|
<rank>variety</rank>
|
|
132
|
<parent_id>
|
|
133
|
<taxonconcept>
|
|
134
|
<rank>subspecies</rank>
|
|
135
|
<parent_id>
|
|
136
|
<taxonconcept>
|
|
137
|
<rank>species</rank>
|
|
138
|
<taxonepithet>$Specific_epithet_matched</taxonepithet>
|
|
139
|
<parent_id>
|
|
140
|
<taxonconcept>
|
|
141
|
<rank>genus</rank>
|
|
142
|
<taxonepithet>$Genus_matched</taxonepithet>
|
|
143
|
<parent_id>
|
|
144
|
<taxonconcept>
|
|
145
|
<rank>family</rank>
|
|
146
|
<taxonepithet>$Name_matched_accepted_family</taxonepithet>
|
|
147
|
</taxonconcept>
|
|
148
|
</parent_id>
|
|
149
|
</taxonconcept>
|
|
150
|
</parent_id>
|
|
151
|
</taxonconcept>
|
|
152
|
</parent_id>
|
|
153
|
</taxonconcept>
|
|
154
|
</parent_id>
|
|
155
|
</taxonconcept>
|
|
156
|
</parent_id>
|
|
157
|
</taxonconcept>
|
|
158
|
</parent_id>
|
|
159
|
</taxonconcept>
|
|
160
|
</parent_id>
|
|
161
|
<taxonepithet>$Infraspecific_epithet_matched</taxonepithet>
|
|
162
|
</taxonconcept>
|
|
163
|
</parent_id>
|
|
164
|
<rank>$Name_matched_rank</rank>
|
|
165
|
<sourceaccessioncode>$Name_matched_url</sourceaccessioncode>
|
|
166
|
<species>$Specific_epithet_matched</species>
|
|
167
|
<taxonconcept fkey="matched_concept_id">
|
|
168
|
<author>$Author_matched</author>
|
|
169
|
<family>$Family_matched</family>
|
|
170
|
<genus>$Genus_matched</genus>
|
|
171
|
<identifyingtaxonomicname>$Name_submitted</identifyingtaxonomicname>
|
|
172
|
<matched_concept_fit_fraction>
|
|
173
|
<_max>
|
|
174
|
<1>$Family_score</1>
|
|
175
|
<2>$Genus_score</2>
|
|
176
|
<3>$Specific_epithet_score</3>
|
|
177
|
<4>$Overall_score</4>
|
|
178
|
</_max>
|
|
179
|
</matched_concept_fit_fraction>
|
|
180
|
<species>$Specific_epithet_matched</species>
|
|
181
|
<taxonepithet>$Unmatched_terms</taxonepithet>
|
|
182
|
<taxonomicname>$Name_matched</taxonomicname>
|
|
183
|
<verbatimrank>$Infraspecific_rank</verbatimrank>
|
|
184
|
</taxonconcept>
|
|
185
|
<taxonomicname>$Name_matched</taxonomicname>
|
|
186
|
<verbatimrank>$Name_matched_rank</verbatimrank>
|
|
187
|
</taxonconcept>
|
|
188
|
</taxonconcept_id>
|
|
189
|
</taxondetermination>
|
|
190
|
</taxonoccurrence>
|
|
191
|
</locationevent>
|
|
192
|
</location>
|
|
193
|
</path>
|
|
194
|
</_simplifyPath>
|
|
195
|
</VegBIEN>
|
|
196
|
Inserted 11 new rows into database
|
