Revision 5608
Added by Aaron Marcuse-Kubitza almost 12 years ago
inputs/CTFS/StemObservation/VegBIEN.csv | ||
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21 | 21 |
StemTag,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/2", |
22 | 22 |
Tag,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/2", |
23 | 23 |
MeasureID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/else", |
24 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
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25 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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26 |
SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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27 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
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28 |
SpeciesAuthority,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
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29 |
SpeciesAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,
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30 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
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31 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
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32 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=subspecies]/taxonepithet",
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33 |
SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
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34 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
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35 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
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36 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
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24 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
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25 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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27 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
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28 |
SpeciesAuthority,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
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29 |
SpeciesAuthority,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author,
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30 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,
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31 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
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32 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
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33 |
SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
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35 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
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36 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
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37 | 37 |
Description,,** No join mapping for *Description ** |
38 | 38 |
ExactDate,,** No join mapping for *ExactDate ** |
39 | 39 |
FamilyID,,** No join mapping for *FamilyID ** |
inputs/CTFS/TaxonOccurrence/VegBIEN.csv | ||
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9 | 9 |
CensusID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists", |
10 | 10 |
PlotID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists", |
11 | 11 |
SpeciesInvID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1, |
12 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
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Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
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17 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
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18 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=subspecies]/taxonepithet",
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19 |
SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
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20 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
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Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
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SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
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Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
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16 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,
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17 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
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18 |
SubSpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
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SpeciesName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
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20 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
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21 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
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22 |
SpeciesName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
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23 | 23 |
Description,,** No join mapping for *Description ** |
24 | 24 |
FamilyID,,** No join mapping for *FamilyID ** |
25 | 25 |
FieldFamily,,** No join mapping for *FieldFamily ** |
inputs/FIA/Organism/VegBIEN.csv | ||
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16 | 16 |
TreeTag,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/stemobservation/tag, |
17 | 17 |
PlotCD,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists", |
18 | 18 |
TreeTag,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/2", |
19 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
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SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
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24 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
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SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
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Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
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24 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
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25 | 25 |
County,/location/locationplace/*_id/placepath/county, |
26 | 26 |
StateProvince,/location/locationplace/*_id/placepath/stateprovince, |
27 | 27 |
HOM,,** No join mapping for *HOM ** |
inputs/SALVIAS/plotObservations/VegBIEN.csv | ||
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57 | 57 |
tag1,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/2/_alt/2","The second tag supercedes the first. Brad: Another type of code, typically a number, used by the original data provider to indicate an individual tree. These are numbers on physical tags attached to the tree. Tag2 Is the same thing, only used if the first tag was lost. Obviously not a good system as it's possible a tree tag could be lost and changed more than once." |
58 | 58 |
Habit,"/location/locationevent/taxonoccurrence/growthform/_map:[./{T,Arbol,palm}=tree,./{H,""Hemiepífito""}=hemiepiphyte,./{L,l,""L?"",Liana}=liana,E=epiphyte,S=shrub,Hb=herb,""vine-herbaceous""=vine,graminoid=grass,rosette=forb,*=*]/value","Brad: This is growth form (tree, shrub, herb, etc.). It is an observation of a trait.; According to <http://salvias.net/Documents/salvias_data_dictionary.html#Plot+data.habit>, <https://projects.nceas.ucsb.edu/nceas/projects/bien/wiki/SALVIAS#Habit>" |
59 | 59 |
PlotObsID,"/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/2/_if[@name=""if organism in AggregateOccurrence""]/else","Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later." |
60 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
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61 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
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62 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
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63 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
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64 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
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infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
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66 |
auth,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",Brad: This is the author of the scientificName.
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auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Brad: This is the author of the scientificName.
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68 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
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69 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
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70 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank",
|
|
71 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank",
|
|
72 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
|
|
73 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
74 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
|
|
75 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonepithet,
|
|
76 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank,
|
|
77 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
|
|
78 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/verbatimrank,
|
|
60 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
|
61 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
62 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
63 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
64 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
65 |
infra_ep_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
66 |
auth,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",Brad: This is the author of the scientificName.
|
|
67 |
auth,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author,Brad: This is the author of the scientificName.
|
|
68 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,
|
|
69 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
|
|
70 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
|
|
71 |
infra_rank_1,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/verbatimrank",
|
|
72 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
|
73 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
74 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
75 |
infra_ep_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
|
|
76 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/rank,
|
|
77 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
|
|
78 |
infra_rank_1,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/verbatimrank,
|
|
79 | 79 |
cfaff,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,"Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
80 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/family,Brad: OMIT
|
|
81 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/genus,
|
|
82 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT
|
|
83 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
84 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT
|
|
85 |
OrigSpecies,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",Brad: OMIT
|
|
86 |
OrigGenus,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
87 |
OrigFamily,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",Brad: OMIT
|
|
88 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/species,Brad: OMIT
|
|
80 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/family,Brad: OMIT
|
|
81 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/genus,
|
|
82 |
OrigFamily,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,Brad: OMIT
|
|
83 |
OrigGenus,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
84 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3,Brad: OMIT
|
|
85 |
OrigSpecies,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",Brad: OMIT
|
|
86 |
OrigGenus,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
87 |
OrigFamily,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",Brad: OMIT
|
|
88 |
OrigSpecies,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/species,Brad: OMIT
|
|
89 | 89 |
coll_firstname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/1,Brad: See comment above |
90 | 90 |
coll_lastname,/location/locationevent/taxonoccurrence/verbatimcollectorname/_join_words/2,"Brad: This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick." |
91 | 91 |
DetType,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/cond/_eq:[right=indirect]/left","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
inputs/.TNRS/tnrs/VegBIEN.csv | ||
---|---|---|
1 | 1 |
TNRS,VegBIEN:/_simplifyPath:[next=parent_id]/path,Comments |
2 | 2 |
Name_matched,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3", |
3 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
4 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
|
|
5 |
Name_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
6 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",Contains family based on matched name
|
|
7 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
8 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
9 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
10 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
11 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
12 |
Name_matched_author,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",Contains author based on matched name
|
|
13 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/author,
|
|
14 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/family,
|
|
15 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
|
|
16 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
17 |
Accepted_name_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
18 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/identifyingtaxonomicname/_alt/2/_join_words/2,
|
|
19 |
Accepted_name_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=NCBI,rank=family]/taxonepithet",
|
|
20 |
Accepted_name_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
|
|
21 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/parent_id/taxonconcept/rank,
|
|
22 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/parent_id/taxonconcept/verbatimrank,
|
|
23 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/rank,
|
|
24 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/taxonomicname,
|
|
25 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_taxonconcept_set_matched_concept_id/matched_concept_id/taxonconcept/verbatimrank,
|
|
26 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,Contains author based on matched name
|
|
27 |
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,Contains family based on matched name
|
|
28 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
|
|
29 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/rank",
|
|
30 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/_if[@name=""if has explicit parent""]/else/verbatimrank",
|
|
31 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
|
|
32 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
33 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",Contains family based on matched name
|
|
34 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonepithet,
|
|
35 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/rank,
|
|
36 |
Name_matched_url,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/sourceaccessioncode,
|
|
37 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
|
|
38 |
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/author,Contains author in original string
|
|
39 |
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/family,Contains family in original string (uncommon)
|
|
40 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/genus,
|
|
41 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/identifyingtaxonomicname,
|
|
42 |
Family_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/matched_concept_fit_fraction/_max/1,
|
|
43 |
Genus_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/matched_concept_fit_fraction/_max/2,
|
|
44 |
Specific_epithet_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/matched_concept_fit_fraction/_max/3,
|
|
45 |
Overall_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/matched_concept_fit_fraction/_max/4,Assuming is a fraction based on the range of values
|
|
46 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/species,
|
|
47 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/taxonepithet/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
48 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/taxonepithet/_if[@name=""if has verbatim name""]/then",
|
|
49 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/taxonomicname,
|
|
50 |
Infraspecific_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonconcept:[@fkey=matched_concept_id]/verbatimrank,
|
|
51 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonepithet/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
52 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonepithet/_if[@name=""if has verbatim name""]/else",
|
|
53 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname,
|
|
54 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/verbatimrank,
|
|
3 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
4 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/2",
|
|
5 |
Name_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
6 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",Contains family based on matched name
|
|
7 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
8 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
9 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
10 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
11 |
Infraspecific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
12 |
Name_matched_author,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",Contains author based on matched name
|
|
13 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/author,
|
|
14 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/family,
|
|
15 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
|
|
16 |
Accepted_name_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
17 |
Accepted_name_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
|
|
18 |
Accepted_name_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/identifyingtaxonomicname/_alt/2/_join_words/2,
|
|
19 |
Accepted_name_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=NCBI,rank=family]/taxonepithet",
|
|
20 |
Accepted_name_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
21 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/parent_id/taxonlabel/rank,
|
|
22 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/parent_id/taxonlabel/verbatimrank,
|
|
23 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/rank,
|
|
24 |
Accepted_name,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/taxonomicname,
|
|
25 |
Accepted_name_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_taxonlabel_set_matched_label_id/matched_label_id/taxonlabel/verbatimrank,
|
|
26 |
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author,Contains author based on matched name
|
|
27 |
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,Contains family based on matched name
|
|
28 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
|
|
29 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",
|
|
30 |
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/verbatimrank",
|
|
31 |
Specific_epithet_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
|
32 |
Genus_matched,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
33 |
Name_matched_accepted_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",Contains family based on matched name
|
|
34 |
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
|
|
35 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/rank,
|
|
36 |
Name_matched_url,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/sourceaccessioncode,
|
|
37 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
|
|
38 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonepithet/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
39 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonepithet/_if[@name=""if has verbatim name""]/else",
|
|
40 |
Author_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/author,Contains author in original string
|
|
41 |
Family_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/family,Contains family in original string (uncommon)
|
|
42 |
Genus_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/genus,
|
|
43 |
Name_submitted,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/identifyingtaxonomicname,
|
|
44 |
Family_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_max/1,
|
|
45 |
Genus_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_max/2,
|
|
46 |
Specific_epithet_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_max/3,
|
|
47 |
Overall_score,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/matched_label_fit_fraction/_max/4,Assuming is a fraction based on the range of values
|
|
48 |
Specific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/species,
|
|
49 |
Name_submitted,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/taxonepithet/_if[@name=""if has verbatim name""]/cond/_exists",
|
|
50 |
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/taxonepithet/_if[@name=""if has verbatim name""]/then",
|
|
51 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/taxonomicname,
|
|
52 |
Infraspecific_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonlabel:[@fkey=matched_label_id]/verbatimrank,
|
|
53 |
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonomicname,
|
|
54 |
Name_matched_rank,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/verbatimrank,
|
|
55 | 55 |
Accepted_name_lsid,,** No join mapping for *Accepted_name_lsid ** |
56 | 56 |
Accepted_name_species,,** No join mapping for *Accepted_name_species ** Also contains genus. Omitted because Accepted_name contains more info. |
57 | 57 |
Accepted_name_url,,** No join mapping for *Accepted_name_url ** |
inputs/U/Specimen/test.xml.ref | ||
---|---|---|
66 | 66 |
<sourceaccessioncode>$ID</sourceaccessioncode> |
67 | 67 |
<taxondetermination> |
68 | 68 |
<party_id><party><fullname>$Detby</fullname></party></party_id> |
69 |
<taxonconcept_id>
|
|
70 |
<taxonconcept>
|
|
71 |
<matched_concept_id>
|
|
72 |
<taxonconcept>
|
|
69 |
<taxonlabel_id>
|
|
70 |
<taxonlabel>
|
|
71 |
<matched_label_id>
|
|
72 |
<taxonlabel>
|
|
73 | 73 |
<creator_id> |
74 | 74 |
<party> |
75 | 75 |
<creator_id>0</creator_id> |
... | ... | |
82 | 82 |
<2>$Genus</2> |
83 | 83 |
</_join_words> |
84 | 84 |
</identifyingtaxonomicname> |
85 |
</taxonconcept>
|
|
86 |
</matched_concept_id>
|
|
85 |
</taxonlabel>
|
|
86 |
</matched_label_id>
|
|
87 | 87 |
<creator_id> |
88 | 88 |
<_simplifyPath> |
89 | 89 |
<next>creator_id</next> |
... | ... | |
93 | 93 |
<family>$Family</family> |
94 | 94 |
<genus>$Genus</genus> |
95 | 95 |
<parent_id> |
96 |
<taxonconcept>
|
|
96 |
<taxonlabel>
|
|
97 | 97 |
<parent_id> |
98 |
<taxonconcept>
|
|
98 |
<taxonlabel>
|
|
99 | 99 |
<rank>cultivar</rank> |
100 | 100 |
<parent_id> |
101 |
<taxonconcept>
|
|
101 |
<taxonlabel>
|
|
102 | 102 |
<rank>forma</rank> |
103 | 103 |
<parent_id> |
104 |
<taxonconcept>
|
|
104 |
<taxonlabel>
|
|
105 | 105 |
<rank>variety</rank> |
106 | 106 |
<parent_id> |
107 |
<taxonconcept>
|
|
107 |
<taxonlabel>
|
|
108 | 108 |
<rank>subspecies</rank> |
109 | 109 |
<parent_id> |
110 |
<taxonconcept>
|
|
110 |
<taxonlabel>
|
|
111 | 111 |
<rank>species</rank> |
112 | 112 |
<parent_id> |
113 |
<taxonconcept>
|
|
113 |
<taxonlabel>
|
|
114 | 114 |
<rank>genus</rank> |
115 | 115 |
<taxonepithet>$Genus</taxonepithet> |
116 | 116 |
<parent_id> |
117 |
<taxonconcept>
|
|
117 |
<taxonlabel>
|
|
118 | 118 |
<rank>family</rank> |
119 | 119 |
<taxonepithet>$Family</taxonepithet> |
120 |
</taxonconcept>
|
|
120 |
</taxonlabel>
|
|
121 | 121 |
</parent_id> |
122 |
</taxonconcept>
|
|
122 |
</taxonlabel>
|
|
123 | 123 |
</parent_id> |
124 |
</taxonconcept>
|
|
124 |
</taxonlabel>
|
|
125 | 125 |
</parent_id> |
126 |
</taxonconcept>
|
|
126 |
</taxonlabel>
|
|
127 | 127 |
</parent_id> |
128 |
</taxonconcept>
|
|
128 |
</taxonlabel>
|
|
129 | 129 |
</parent_id> |
130 |
</taxonconcept>
|
|
130 |
</taxonlabel>
|
|
131 | 131 |
</parent_id> |
132 |
</taxonconcept>
|
|
132 |
</taxonlabel>
|
|
133 | 133 |
</parent_id> |
134 |
</taxonconcept>
|
|
134 |
</taxonlabel>
|
|
135 | 135 |
</parent_id> |
136 | 136 |
<creationdate> |
137 | 137 |
<_date> |
... | ... | |
144 | 144 |
</year> |
145 | 145 |
</_date> |
146 | 146 |
</creationdate> |
147 |
</taxonconcept>
|
|
148 |
</taxonconcept_id>
|
|
147 |
</taxonlabel>
|
|
148 |
</taxonlabel_id>
|
|
149 | 149 |
<taxonfit>$cf</taxonfit> |
150 | 150 |
<determinationdate> |
151 | 151 |
<_date> |
inputs/GBIF/Specimen/VegBIEN.csv | ||
---|---|---|
14 | 14 |
ScientificNameOriginal,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/1", |
15 | 15 |
ScientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3", |
16 | 16 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
17 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
18 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
|
19 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
20 |
SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
21 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
22 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
23 |
AuthorOfScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
|
|
24 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author,
|
|
25 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2,
|
|
26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
|
|
27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
|
|
28 |
SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
|
|
29 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
30 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
|
|
31 |
InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonepithet,
|
|
32 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
|
|
33 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname,
|
|
34 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/family,
|
|
35 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/genus,
|
|
36 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
|
|
37 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
38 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
39 |
GBIFGenusOriginal,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
40 |
GBIFFamilyOriginal,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
|
|
41 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonconcept/taxonomicname,
|
|
17 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
18 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
|
19 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
20 |
SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
21 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond",
|
|
22 |
InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2",
|
|
23 |
AuthorOfScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2",
|
|
24 |
AuthorOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author,
|
|
25 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2,
|
|
26 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,
|
|
27 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
|
|
28 |
SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
|
29 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
30 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
31 |
InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/taxonepithet,
|
|
32 |
SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
|
|
33 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonomicname,
|
|
34 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/family,
|
|
35 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/genus,
|
|
36 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1,
|
|
37 |
GBIFFamilyOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1,
|
|
38 |
GBIFGenusOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
|
39 |
GBIFGenusOriginal,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
40 |
GBIFFamilyOriginal,"/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
41 |
ScientificNameOriginal,/location/locationevent/taxonoccurrence/taxondetermination[isoriginal=true]/*_id/taxonlabel/taxonomicname,
|
|
42 | 42 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
43 | 43 |
CatalogNO,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
44 | 44 |
Locality,/location/locationnarrative/_merge/1, |
inputs/NCU-NCSC/Specimen/test.xml.ref | ||
---|---|---|
64 | 64 |
<iscultivated>$Cultivated?</iscultivated> |
65 | 65 |
<sourceaccessioncode>$Accession Number</sourceaccessioncode> |
66 | 66 |
<taxondetermination> |
67 |
<taxonconcept_id>
|
|
68 |
<taxonconcept>
|
|
69 |
<matched_concept_id>
|
|
70 |
<taxonconcept>
|
|
67 |
<taxonlabel_id>
|
|
68 |
<taxonlabel>
|
|
69 |
<matched_label_id>
|
|
70 |
<taxonlabel>
|
|
71 | 71 |
<creator_id> |
72 | 72 |
<party> |
73 | 73 |
<creator_id>0</creator_id> |
... | ... | |
75 | 75 |
</party> |
76 | 76 |
</creator_id> |
77 | 77 |
<identifyingtaxonomicname>$Full Taxon Name</identifyingtaxonomicname> |
78 |
</taxonconcept>
|
|
79 |
</matched_concept_id>
|
|
78 |
</taxonlabel>
|
|
79 |
</matched_label_id>
|
|
80 | 80 |
<taxonomicname>$Full Taxon Name</taxonomicname> |
81 |
</taxonconcept>
|
|
82 |
</taxonconcept_id>
|
|
81 |
</taxonlabel>
|
|
82 |
</taxonlabel_id>
|
|
83 | 83 |
</taxondetermination> |
84 | 84 |
</taxonoccurrence> |
85 | 85 |
</locationevent> |
inputs/MO/Specimen/test.xml.ref | ||
---|---|---|
79 | 79 |
</aggregateoccurrence> |
80 | 80 |
<taxondetermination> |
81 | 81 |
<party_id><party><fullname>$IdentifiedBy</fullname></party></party_id> |
82 |
<taxonconcept_id>
|
|
83 |
<taxonconcept>
|
|
84 |
<matched_concept_id>
|
|
85 |
<taxonconcept>
|
|
82 |
<taxonlabel_id>
|
|
83 |
<taxonlabel>
|
|
84 |
<matched_label_id>
|
|
85 |
<taxonlabel>
|
|
86 | 86 |
<creator_id> |
87 | 87 |
<party> |
88 | 88 |
<creator_id>0</creator_id> |
... | ... | |
107 | 107 |
<2>$ScientificNameAuthor</2> |
108 | 108 |
</_join_words> |
109 | 109 |
</identifyingtaxonomicname> |
110 |
</taxonconcept>
|
|
111 |
</matched_concept_id>
|
|
110 |
</taxonlabel>
|
|
111 |
</matched_label_id>
|
|
112 | 112 |
<author>$ScientificNameAuthor</author> |
113 | 113 |
<creator_id> |
114 | 114 |
<_simplifyPath> |
... | ... | |
119 | 119 |
<family>$family</family> |
120 | 120 |
<genus>$genus</genus> |
121 | 121 |
<parent_id> |
122 |
<taxonconcept>
|
|
122 |
<taxonlabel>
|
|
123 | 123 |
<parent_id> |
124 |
<taxonconcept>
|
|
124 |
<taxonlabel>
|
|
125 | 125 |
<rank>cultivar</rank> |
126 | 126 |
<parent_id> |
127 |
<taxonconcept>
|
|
127 |
<taxonlabel>
|
|
128 | 128 |
<rank>forma</rank> |
129 | 129 |
<parent_id> |
130 |
<taxonconcept>
|
|
130 |
<taxonlabel>
|
|
131 | 131 |
<rank>variety</rank> |
132 | 132 |
<parent_id> |
133 |
<taxonconcept>
|
|
133 |
<taxonlabel>
|
|
134 | 134 |
<rank>subspecies</rank> |
135 | 135 |
<taxonepithet>$Subspecies</taxonepithet> |
136 | 136 |
<parent_id> |
137 |
<taxonconcept>
|
|
137 |
<taxonlabel>
|
|
138 | 138 |
<rank>species</rank> |
139 | 139 |
<taxonepithet>$species</taxonepithet> |
140 | 140 |
<parent_id> |
141 |
<taxonconcept>
|
|
141 |
<taxonlabel>
|
|
142 | 142 |
<rank>genus</rank> |
143 | 143 |
<taxonepithet>$genus</taxonepithet> |
144 | 144 |
<parent_id> |
145 |
<taxonconcept>
|
|
145 |
<taxonlabel>
|
|
146 | 146 |
<rank>family</rank> |
147 | 147 |
<taxonepithet>$family</taxonepithet> |
148 | 148 |
<parent_id> |
149 |
<taxonconcept>
|
|
149 |
<taxonlabel>
|
|
150 | 150 |
<rank>order</rank> |
151 | 151 |
<parent_id> |
152 |
<taxonconcept>
|
|
152 |
<taxonlabel>
|
|
153 | 153 |
<rank>class</rank> |
154 | 154 |
<parent_id> |
155 |
<taxonconcept>
|
|
155 |
<taxonlabel>
|
|
156 | 156 |
<rank>phylum</rank> |
157 | 157 |
<parent_id> |
158 |
<taxonconcept>
|
|
158 |
<taxonlabel>
|
|
159 | 159 |
<rank>kingdom</rank> |
160 | 160 |
<taxonepithet>$Kingdom</taxonepithet> |
161 |
</taxonconcept>
|
|
161 |
</taxonlabel>
|
|
162 | 162 |
</parent_id> |
163 |
</taxonconcept>
|
|
163 |
</taxonlabel>
|
|
164 | 164 |
</parent_id> |
165 |
</taxonconcept>
|
|
165 |
</taxonlabel>
|
|
166 | 166 |
</parent_id> |
167 |
</taxonconcept>
|
|
167 |
</taxonlabel>
|
|
168 | 168 |
</parent_id> |
169 |
</taxonconcept>
|
|
169 |
</taxonlabel>
|
|
170 | 170 |
</parent_id> |
171 |
</taxonconcept>
|
|
171 |
</taxonlabel>
|
|
172 | 172 |
</parent_id> |
173 |
</taxonconcept>
|
|
173 |
</taxonlabel>
|
|
174 | 174 |
</parent_id> |
175 |
</taxonconcept>
|
|
175 |
</taxonlabel>
|
|
176 | 176 |
</parent_id> |
177 |
</taxonconcept>
|
|
177 |
</taxonlabel>
|
|
178 | 178 |
</parent_id> |
179 |
</taxonconcept>
|
|
179 |
</taxonlabel>
|
|
180 | 180 |
</parent_id> |
181 |
</taxonconcept>
|
|
181 |
</taxonlabel>
|
|
182 | 182 |
</parent_id> |
183 |
</taxonconcept>
|
|
183 |
</taxonlabel>
|
|
184 | 184 |
</parent_id> |
185 | 185 |
<species>$species</species> |
186 | 186 |
<taxonomicname>$ScientificName</taxonomicname> |
187 |
</taxonconcept>
|
|
188 |
</taxonconcept_id>
|
|
187 |
</taxonlabel>
|
|
188 |
</taxonlabel_id>
|
|
189 | 189 |
</taxondetermination> |
190 | 190 |
<verbatimcollectorname>$Collector</verbatimcollectorname> |
191 | 191 |
</taxonoccurrence> |
inputs/SpeciesLink/Specimen/test.xml.ref | ||
---|---|---|
226 | 226 |
</fullname> |
227 | 227 |
</party> |
228 | 228 |
</party_id> |
229 |
<taxonconcept_id>
|
|
230 |
<taxonconcept>
|
|
231 |
<matched_concept_id>
|
|
232 |
<taxonconcept>
|
|
229 |
<taxonlabel_id>
|
|
230 |
<taxonlabel>
|
|
231 |
<matched_label_id>
|
|
232 |
<taxonlabel>
|
|
233 | 233 |
<creator_id> |
234 | 234 |
<party> |
235 | 235 |
<creator_id>0</creator_id> |
... | ... | |
290 | 290 |
</2> |
291 | 291 |
</_join_words> |
292 | 292 |
</identifyingtaxonomicname> |
293 |
</taxonconcept>
|
|
294 |
</matched_concept_id>
|
|
293 |
</taxonlabel>
|
|
294 |
</matched_label_id>
|
|
295 | 295 |
<author> |
296 | 296 |
<_alt> |
297 | 297 |
<1>$dwc_terms_scientificNameAuthorship</1> |
... | ... | |
330 | 330 |
</_alt> |
331 | 331 |
</genus> |
332 | 332 |
<parent_id> |
333 |
<taxonconcept>
|
|
333 |
<taxonlabel>
|
|
334 | 334 |
<parent_id> |
335 |
<taxonconcept>
|
|
335 |
<taxonlabel>
|
|
336 | 336 |
<rank>cultivar</rank> |
337 | 337 |
<parent_id> |
338 |
<taxonconcept>
|
|
338 |
<taxonlabel>
|
|
339 | 339 |
<rank>forma</rank> |
340 | 340 |
<parent_id> |
341 |
<taxonconcept>
|
|
341 |
<taxonlabel>
|
|
342 | 342 |
<rank>variety</rank> |
343 | 343 |
<parent_id> |
344 |
<taxonconcept>
|
|
344 |
<taxonlabel>
|
|
345 | 345 |
<rank>subspecies</rank> |
346 | 346 |
<taxonepithet>$conceptual_darwin_2003_1_0_Subspecies</taxonepithet> |
347 | 347 |
<parent_id> |
348 |
<taxonconcept>
|
|
348 |
<taxonlabel>
|
|
349 | 349 |
<rank>species</rank> |
350 | 350 |
<taxonepithet> |
351 | 351 |
<_alt> |
... | ... | |
355 | 355 |
</_alt> |
356 | 356 |
</taxonepithet> |
357 | 357 |
<parent_id> |
358 |
<taxonconcept>
|
|
358 |
<taxonlabel>
|
|
359 | 359 |
<rank>genus</rank> |
360 | 360 |
<taxonepithet> |
361 | 361 |
<_alt> |
... | ... | |
365 | 365 |
</_alt> |
366 | 366 |
</taxonepithet> |
367 | 367 |
<parent_id> |
368 |
<taxonconcept>
|
|
368 |
<taxonlabel>
|
|
369 | 369 |
<rank>family</rank> |
370 | 370 |
<taxonepithet> |
371 | 371 |
<_alt> |
... | ... | |
375 | 375 |
</_alt> |
376 | 376 |
</taxonepithet> |
377 | 377 |
<parent_id> |
378 |
<taxonconcept>
|
|
378 |
<taxonlabel>
|
|
379 | 379 |
<rank>order</rank> |
380 | 380 |
<taxonepithet> |
381 | 381 |
<_alt> |
... | ... | |
385 | 385 |
</_alt> |
386 | 386 |
</taxonepithet> |
387 | 387 |
<parent_id> |
388 |
<taxonconcept>
|
|
388 |
<taxonlabel>
|
|
389 | 389 |
<rank>class</rank> |
390 | 390 |
<taxonepithet> |
391 | 391 |
<_alt> |
... | ... | |
395 | 395 |
</_alt> |
396 | 396 |
</taxonepithet> |
397 | 397 |
<parent_id> |
398 |
<taxonconcept>
|
|
398 |
<taxonlabel>
|
|
399 | 399 |
<rank>phylum</rank> |
400 | 400 |
<taxonepithet> |
401 | 401 |
<_alt> |
... | ... | |
405 | 405 |
</_alt> |
406 | 406 |
</taxonepithet> |
407 | 407 |
<parent_id> |
408 |
<taxonconcept>
|
|
408 |
<taxonlabel>
|
|
409 | 409 |
<rank>kingdom</rank> |
410 | 410 |
<taxonepithet> |
411 | 411 |
<_alt> |
... | ... | |
414 | 414 |
<2>$dwc_terms_kingdom</2> |
415 | 415 |
</_alt> |
416 | 416 |
</taxonepithet> |
417 |
</taxonconcept>
|
|
417 |
</taxonlabel>
|
|
418 | 418 |
</parent_id> |
419 |
</taxonconcept>
|
|
419 |
</taxonlabel>
|
|
420 | 420 |
</parent_id> |
421 |
</taxonconcept>
|
|
421 |
</taxonlabel>
|
|
422 | 422 |
</parent_id> |
423 |
</taxonconcept>
|
|
423 |
</taxonlabel>
|
|
424 | 424 |
</parent_id> |
425 |
</taxonconcept>
|
|
425 |
</taxonlabel>
|
|
426 | 426 |
</parent_id> |
427 |
</taxonconcept>
|
|
427 |
</taxonlabel>
|
|
428 | 428 |
</parent_id> |
429 |
</taxonconcept>
|
|
429 |
</taxonlabel>
|
|
430 | 430 |
</parent_id> |
431 |
</taxonconcept>
|
|
431 |
</taxonlabel>
|
|
432 | 432 |
</parent_id> |
433 |
</taxonconcept>
|
|
433 |
</taxonlabel>
|
|
434 | 434 |
</parent_id> |
435 |
</taxonconcept>
|
|
435 |
</taxonlabel>
|
|
436 | 436 |
</parent_id> |
437 |
</taxonconcept>
|
|
437 |
</taxonlabel>
|
|
438 | 438 |
</parent_id> |
439 | 439 |
<taxonepithet> |
440 | 440 |
<_alt> |
... | ... | |
442 | 442 |
<1>$dwc_terms_infraspecificEpithet</1> |
443 | 443 |
</_alt> |
444 | 444 |
</taxonepithet> |
445 |
</taxonconcept>
|
|
445 |
</taxonlabel>
|
|
446 | 446 |
</parent_id> |
447 | 447 |
<species> |
448 | 448 |
<_alt> |
... | ... | |
488 | 488 |
</2> |
489 | 489 |
</_alt> |
490 | 490 |
</creationdate> |
491 |
</taxonconcept>
|
|
492 |
</taxonconcept_id>
|
|
491 |
</taxonlabel>
|
|
492 |
</taxonlabel_id>
|
|
493 | 493 |
<notes>$dwc_dwcore_Remarks</notes> |
494 | 494 |
<determinationdate> |
495 | 495 |
<_alt> |
inputs/VegBank/taxonobservation_/test.xml.ref | ||
---|---|---|
16 | 16 |
<authortaxoncode>$authorplantname</authortaxoncode> |
17 | 17 |
<sourceaccessioncode>$taxonobservation_id</sourceaccessioncode> |
18 | 18 |
<taxondetermination> |
19 |
<taxonconcept_id>
|
|
20 |
<taxonconcept>
|
|
21 |
<matched_concept_id>
|
|
22 |
<taxonconcept>
|
|
19 |
<taxonlabel_id>
|
|
20 |
<taxonlabel>
|
|
21 |
<matched_label_id>
|
|
22 |
<taxonlabel>
|
|
23 | 23 |
<creator_id> |
24 | 24 |
<party> |
25 | 25 |
<creator_id>0</creator_id> |
... | ... | |
46 | 46 |
</8> |
47 | 47 |
</_join_words> |
48 | 48 |
</identifyingtaxonomicname> |
49 |
</taxonconcept>
|
|
50 |
</matched_concept_id>
|
|
49 |
</taxonlabel>
|
|
50 |
</matched_label_id>
|
|
51 | 51 |
<family>$Family</family> |
52 | 52 |
<genus>$Genus</genus> |
53 | 53 |
<parent_id> |
54 |
<taxonconcept>
|
|
54 |
<taxonlabel>
|
|
55 | 55 |
<parent_id> |
56 |
<taxonconcept>
|
|
56 |
<taxonlabel>
|
|
57 | 57 |
<rank>cultivar</rank> |
58 | 58 |
<parent_id> |
59 |
<taxonconcept>
|
|
59 |
<taxonlabel>
|
|
60 | 60 |
<rank>forma</rank> |
61 | 61 |
<taxonepithet>$Forma</taxonepithet> |
62 | 62 |
<parent_id> |
63 |
<taxonconcept>
|
|
63 |
<taxonlabel>
|
|
64 | 64 |
<rank>variety</rank> |
65 | 65 |
<taxonepithet>$Variety</taxonepithet> |
66 | 66 |
<parent_id> |
67 |
<taxonconcept>
|
|
67 |
<taxonlabel>
|
|
68 | 68 |
<rank>subspecies</rank> |
69 | 69 |
<taxonepithet>$Subspecies</taxonepithet> |
70 | 70 |
<parent_id> |
71 |
<taxonconcept>
|
|
71 |
<taxonlabel>
|
|
72 | 72 |
<rank>species</rank> |
73 | 73 |
<taxonepithet>$Species</taxonepithet> |
74 | 74 |
<parent_id> |
75 |
<taxonconcept>
|
|
75 |
<taxonlabel>
|
|
76 | 76 |
<rank>genus</rank> |
77 | 77 |
<taxonepithet>$Genus</taxonepithet> |
78 | 78 |
<parent_id> |
79 |
<taxonconcept>
|
|
79 |
<taxonlabel>
|
|
80 | 80 |
<rank>family</rank> |
81 | 81 |
<taxonepithet>$Family</taxonepithet> |
82 | 82 |
<parent_id> |
83 |
<taxonconcept>
|
|
83 |
<taxonlabel>
|
|
84 | 84 |
<rank>order</rank> |
85 | 85 |
<taxonepithet>$Order</taxonepithet> |
86 | 86 |
<parent_id> |
87 |
<taxonconcept>
|
|
87 |
<taxonlabel>
|
|
88 | 88 |
<rank>class</rank> |
89 | 89 |
<taxonepithet>$Class</taxonepithet> |
90 | 90 |
<parent_id> |
91 |
<taxonconcept>
|
|
91 |
<taxonlabel>
|
|
92 | 92 |
<rank>phylum</rank> |
93 | 93 |
<parent_id> |
94 |
<taxonconcept>
|
|
94 |
<taxonlabel>
|
|
95 | 95 |
<rank>kingdom</rank> |
96 | 96 |
<taxonepithet>$Kingdom</taxonepithet> |
97 |
</taxonconcept>
|
|
97 |
</taxonlabel>
|
|
98 | 98 |
</parent_id> |
99 |
</taxonconcept>
|
|
99 |
</taxonlabel>
|
|
100 | 100 |
</parent_id> |
101 |
</taxonconcept>
|
|
101 |
</taxonlabel>
|
|
102 | 102 |
</parent_id> |
103 |
</taxonconcept>
|
|
103 |
</taxonlabel>
|
|
104 | 104 |
</parent_id> |
105 |
</taxonconcept>
|
|
105 |
</taxonlabel>
|
|
106 | 106 |
</parent_id> |
107 |
</taxonconcept>
|
|
107 |
</taxonlabel>
|
|
108 | 108 |
</parent_id> |
109 |
</taxonconcept>
|
|
109 |
</taxonlabel>
|
|
110 | 110 |
</parent_id> |
111 |
</taxonconcept>
|
|
111 |
</taxonlabel>
|
|
112 | 112 |
</parent_id> |
113 |
</taxonconcept>
|
|
113 |
</taxonlabel>
|
|
114 | 114 |
</parent_id> |
115 |
</taxonconcept>
|
|
115 |
</taxonlabel>
|
|
116 | 116 |
</parent_id> |
117 |
</taxonconcept>
|
|
117 |
</taxonlabel>
|
|
118 | 118 |
</parent_id> |
119 |
</taxonconcept>
|
|
119 |
</taxonlabel>
|
|
120 | 120 |
</parent_id> |
121 | 121 |
<species>$Species</species> |
122 | 122 |
<creationdate><_date><date><_dateRangeStart><value>$interpretationdate</value></_dateRangeStart></date></_date></creationdate> |
123 |
</taxonconcept>
|
|
124 |
</taxonconcept_id>
|
|
123 |
</taxonlabel>
|
|
124 |
</taxonlabel_id>
|
|
125 | 125 |
<taxonfit>$taxonfit</taxonfit> |
126 | 126 |
<determinationdate><_date><date><_dateRangeStart><value>$interpretationdate</value></_dateRangeStart></date></_date></determinationdate> |
127 | 127 |
</taxondetermination> |
128 | 128 |
<taxondetermination> |
129 | 129 |
<isoriginal>true</isoriginal> |
130 |
<taxonconcept_id>
|
|
131 |
<taxonconcept>
|
|
132 |
<matched_concept_id>
|
|
133 |
<taxonconcept>
|
|
130 |
<taxonlabel_id>
|
|
131 |
<taxonlabel>
|
|
132 |
<matched_label_id>
|
|
133 |
<taxonlabel>
|
|
134 | 134 |
<creator_id> |
135 | 135 |
<party> |
136 | 136 |
<creator_id>0</creator_id> |
... | ... | |
138 | 138 |
</party> |
139 | 139 |
</creator_id> |
140 | 140 |
<identifyingtaxonomicname>$authorplantname</identifyingtaxonomicname> |
141 |
</taxonconcept>
|
|
142 |
</matched_concept_id>
|
|
141 |
</taxonlabel>
|
|
142 |
</matched_label_id>
|
|
143 | 143 |
<taxonomicname>$authorplantname</taxonomicname> |
144 |
</taxonconcept>
|
|
145 |
</taxonconcept_id>
|
|
144 |
</taxonlabel>
|
|
145 |
</taxonlabel_id>
|
|
146 | 146 |
</taxondetermination> |
147 | 147 |
</taxonoccurrence> |
148 | 148 |
</locationevent> |
inputs/.TNRS/tnrs/test.xml.ref | ||
---|---|---|
7 | 7 |
<locationevent> |
8 | 8 |
<taxonoccurrence> |
9 | 9 |
<taxondetermination> |
10 |
<taxonconcept_id>
|
|
11 |
<taxonconcept>
|
|
10 |
<taxonlabel_id>
|
|
11 |
<taxonlabel>
|
|
12 | 12 |
<identifyingtaxonomicname> |
13 | 13 |
<_join_words> |
14 | 14 |
<1> |
... | ... | |
37 | 37 |
<2>$Name_matched_author</2> |
38 | 38 |
</_join_words> |
39 | 39 |
</identifyingtaxonomicname> |
40 |
<_taxonconcept_set_matched_concept_id>
|
|
41 |
<matched_concept_id>
|
|
42 |
<taxonconcept>
|
|
40 |
<_taxonlabel_set_matched_label_id>
|
|
41 |
<matched_label_id>
|
|
42 |
<taxonlabel>
|
|
43 | 43 |
<author>$Accepted_name_author</author> |
44 | 44 |
<family>$Accepted_name_family</family> |
45 | 45 |
<identifyingtaxonomicname> |
... | ... | |
54 | 54 |
</_join_words> |
55 | 55 |
</identifyingtaxonomicname> |
56 | 56 |
<parent_id> |
57 |
<taxonconcept>
|
|
57 |
<taxonlabel>
|
|
58 | 58 |
<parent_id> |
59 |
<taxonconcept>
|
|
59 |
<taxonlabel>
|
|
60 | 60 |
<rank>cultivar</rank> |
61 | 61 |
<parent_id> |
62 |
<taxonconcept>
|
|
62 |
<taxonlabel>
|
|
63 | 63 |
<rank>forma</rank> |
64 | 64 |
<parent_id> |
65 |
<taxonconcept>
|
|
65 |
<taxonlabel>
|
|
66 | 66 |
<rank>variety</rank> |
67 | 67 |
<parent_id> |
68 |
<taxonconcept>
|
|
68 |
<taxonlabel>
|
|
69 | 69 |
<rank>subspecies</rank> |
70 | 70 |
<parent_id> |
71 |
<taxonconcept>
|
|
71 |
<taxonlabel>
|
|
72 | 72 |
<rank>species</rank> |
73 | 73 |
<parent_id> |
74 |
<taxonconcept>
|
|
74 |
<taxonlabel>
|
|
75 | 75 |
<rank>genus</rank> |
76 | 76 |
<parent_id> |
77 |
<taxonconcept>
|
|
77 |
<taxonlabel>
|
|
78 | 78 |
<rank>family</rank> |
79 |
<matched_concept_id>
|
|
80 |
<taxonconcept>
|
|
79 |
<matched_label_id>
|
|
80 |
<taxonlabel>
|
|
81 | 81 |
<creator_id> |
82 | 82 |
<party> |
83 | 83 |
<creator_id>0</creator_id> |
... | ... | |
86 | 86 |
</creator_id> |
87 | 87 |
<rank>family</rank> |
88 | 88 |
<taxonepithet>$Accepted_name_family</taxonepithet> |
89 |
</taxonconcept>
|
|
90 |
</matched_concept_id>
|
|
89 |
</taxonlabel>
|
|
90 |
</matched_label_id>
|
|
91 | 91 |
<taxonepithet>$Accepted_name_family</taxonepithet> |
92 |
</taxonconcept>
|
|
92 |
</taxonlabel>
|
|
93 | 93 |
</parent_id> |
94 |
</taxonconcept>
|
|
94 |
</taxonlabel>
|
|
95 | 95 |
</parent_id> |
96 |
</taxonconcept>
|
|
96 |
</taxonlabel>
|
|
97 | 97 |
</parent_id> |
98 |
</taxonconcept>
|
|
98 |
</taxonlabel>
|
|
99 | 99 |
</parent_id> |
100 |
</taxonconcept>
|
|
100 |
</taxonlabel>
|
|
101 | 101 |
</parent_id> |
102 |
</taxonconcept>
|
|
102 |
</taxonlabel>
|
|
103 | 103 |
</parent_id> |
104 |
</taxonconcept>
|
|
104 |
</taxonlabel>
|
|
105 | 105 |
</parent_id> |
106 | 106 |
<rank>$Accepted_name_rank</rank> |
107 | 107 |
<verbatimrank>$Accepted_name_rank</verbatimrank> |
108 |
</taxonconcept>
|
|
108 |
</taxonlabel>
|
|
109 | 109 |
</parent_id> |
110 | 110 |
<rank>$Accepted_name_rank</rank> |
111 | 111 |
<taxonomicname>$Accepted_name</taxonomicname> |
112 | 112 |
<verbatimrank>$Accepted_name_rank</verbatimrank> |
113 |
</taxonconcept>
|
|
114 |
</matched_concept_id>
|
|
115 |
</_taxonconcept_set_matched_concept_id>
|
|
113 |
</taxonlabel>
|
|
114 |
</matched_label_id>
|
|
115 |
</_taxonlabel_set_matched_label_id>
|
|
116 | 116 |
<author>$Name_matched_author</author> |
117 | 117 |
<family>$Name_matched_accepted_family</family> |
118 | 118 |
<genus>$Genus_matched</genus> |
119 | 119 |
<parent_id> |
120 |
<taxonconcept>
|
|
120 |
<taxonlabel>
|
|
121 | 121 |
<rank>$Name_matched_rank</rank> |
122 | 122 |
<verbatimrank>$Name_matched_rank</verbatimrank> |
123 | 123 |
<parent_id> |
124 |
<taxonconcept>
|
|
124 |
<taxonlabel>
|
|
125 | 125 |
<rank>cultivar</rank> |
126 | 126 |
<parent_id> |
127 |
<taxonconcept>
|
|
127 |
<taxonlabel>
|
|
128 | 128 |
<rank>forma</rank> |
129 | 129 |
<parent_id> |
130 |
<taxonconcept>
|
|
130 |
<taxonlabel>
|
|
131 | 131 |
<rank>variety</rank> |
132 | 132 |
<parent_id> |
133 |
<taxonconcept>
|
|
133 |
<taxonlabel>
|
|
134 | 134 |
<rank>subspecies</rank> |
135 | 135 |
<parent_id> |
136 |
<taxonconcept>
|
|
136 |
<taxonlabel>
|
|
137 | 137 |
<rank>species</rank> |
138 | 138 |
<taxonepithet>$Specific_epithet_matched</taxonepithet> |
139 | 139 |
<parent_id> |
140 |
<taxonconcept>
|
|
140 |
<taxonlabel>
|
|
141 | 141 |
<rank>genus</rank> |
142 | 142 |
<taxonepithet>$Genus_matched</taxonepithet> |
143 | 143 |
<parent_id> |
144 |
<taxonconcept>
|
|
144 |
<taxonlabel>
|
|
145 | 145 |
<rank>family</rank> |
146 | 146 |
<taxonepithet>$Name_matched_accepted_family</taxonepithet> |
147 |
</taxonconcept>
|
|
147 |
</taxonlabel>
|
|
148 | 148 |
</parent_id> |
149 |
</taxonconcept>
|
|
149 |
</taxonlabel>
|
|
150 | 150 |
</parent_id> |
151 |
</taxonconcept>
|
|
151 |
</taxonlabel>
|
|
152 | 152 |
</parent_id> |
153 |
</taxonconcept>
|
|
153 |
</taxonlabel>
|
|
154 | 154 |
</parent_id> |
155 |
</taxonconcept>
|
|
155 |
</taxonlabel>
|
|
156 | 156 |
</parent_id> |
157 |
</taxonconcept>
|
|
157 |
</taxonlabel>
|
|
158 | 158 |
</parent_id> |
159 |
</taxonconcept>
|
|
159 |
</taxonlabel>
|
|
160 | 160 |
</parent_id> |
161 | 161 |
<taxonepithet>$Infraspecific_epithet_matched</taxonepithet> |
162 |
</taxonconcept>
|
|
162 |
</taxonlabel>
|
|
163 | 163 |
</parent_id> |
164 | 164 |
<rank>$Name_matched_rank</rank> |
165 | 165 |
<sourceaccessioncode>$Name_matched_url</sourceaccessioncode> |
166 | 166 |
<species>$Specific_epithet_matched</species> |
167 |
<taxonconcept fkey="matched_concept_id">
|
|
167 |
<taxonlabel fkey="matched_label_id">
|
|
168 | 168 |
<author>$Author_matched</author> |
169 | 169 |
<family>$Family_matched</family> |
170 | 170 |
<genus>$Genus_matched</genus> |
171 | 171 |
<identifyingtaxonomicname>$Name_submitted</identifyingtaxonomicname> |
172 |
<matched_concept_fit_fraction>
|
|
172 |
<matched_label_fit_fraction>
|
|
173 | 173 |
<_max> |
174 | 174 |
<1>$Family_score</1> |
175 | 175 |
<2>$Genus_score</2> |
176 | 176 |
<3>$Specific_epithet_score</3> |
177 | 177 |
<4>$Overall_score</4> |
178 | 178 |
</_max> |
179 |
</matched_concept_fit_fraction>
|
|
179 |
</matched_label_fit_fraction>
|
|
180 | 180 |
<species>$Specific_epithet_matched</species> |
181 | 181 |
<taxonepithet>$Unmatched_terms</taxonepithet> |
182 | 182 |
<taxonomicname>$Name_matched</taxonomicname> |
183 | 183 |
<verbatimrank>$Infraspecific_rank</verbatimrank> |
184 |
</taxonconcept>
|
|
184 |
</taxonlabel>
|
|
185 | 185 |
<taxonomicname>$Name_matched</taxonomicname> |
186 | 186 |
<verbatimrank>$Name_matched_rank</verbatimrank> |
187 |
</taxonconcept>
|
|
188 |
</taxonconcept_id>
|
|
187 |
</taxonlabel>
|
|
188 |
</taxonlabel_id>
|
|
189 | 189 |
</taxondetermination> |
190 | 190 |
</taxonoccurrence> |
191 | 191 |
</locationevent> |
... | ... | |
193 | 193 |
</path> |
194 | 194 |
</_simplifyPath> |
195 | 195 |
</VegBIEN> |
196 |
Inserted 11 new rows into database |
|
196 |
Inserted 12 new rows into database |
inputs/ARIZ/Specimen/VegBIEN.csv | ||
---|---|---|
30 | 30 |
ScientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3", |
31 | 31 |
GlobalUniqueIdentifier,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3, |
32 | 32 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
33 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",Contains the binomial in addition to the authority
|
|
34 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
35 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
|
36 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
37 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
38 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
|
|
39 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2,
|
|
40 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family,
|
|
41 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus,
|
|
42 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=subspecies]/taxonepithet",
|
|
43 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet",
|
|
44 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet",
|
|
45 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet",
|
|
46 |
Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=order]/taxonepithet",
|
|
47 |
Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonepithet",
|
|
48 |
Phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonepithet",
|
|
49 |
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonepithet",
|
|
50 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species,
|
|
51 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname,
|
|
52 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicnamewithauthor,Contains the binomial in addition to the authority
|
|
33 |
ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/1",Contains the binomial in addition to the authority
|
|
34 |
ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1",
|
|
35 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1",
|
|
36 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
|
37 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1",
|
|
38 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4",
|
|
39 |
IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2,
|
|
40 |
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family,
|
|
41 |
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus,
|
|
42 |
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet",
|
|
43 |
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet",
|
|
44 |
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
|
45 |
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
|
46 |
Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet",
|
|
47 |
Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet",
|
|
48 |
Phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=phylum]/taxonepithet",
|
|
49 |
Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet",
|
|
50 |
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/species,
|
|
51 |
ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonomicname,
|
|
52 |
ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/taxonomicnamewithauthor,Contains the binomial in addition to the authority
|
|
53 | 53 |
Remarks,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/notes, |
54 | 54 |
IdentificationModifier,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit, |
55 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonconcept/creationdate}/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
56 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonconcept/creationdate}/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
57 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonconcept/creationdate}/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
55 |
DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonlabel/creationdate}/_alt/2/_date/day/_nullIf:[null=0,type=float]/value",
|
|
56 |
MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonlabel/creationdate}/_alt/2/_date/month/_nullIf:[null=0,type=float]/value",
|
|
57 |
YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/{determinationdate,*_id/taxonlabel/creationdate}/_alt/2/_date/year/_nullIf:[null=0,type=float]/value",
|
|
58 | 58 |
Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
59 | 59 |
CatalogNumberNumeric,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/1", |
60 | 60 |
CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then/_alt/2",Don't overwrite CatalogNumberNumeric |
inputs/GBIF/Specimen/test.xml.ref | ||
---|---|---|
47 | 47 |
</aggregateoccurrence> |
48 | 48 |
<taxondetermination> |
49 | 49 |
<party_id><party><fullname>$IdentifiedBy</fullname></party></party_id> |
50 |
<taxonconcept_id>
|
|
51 |
<taxonconcept>
|
|
52 |
<matched_concept_id>
|
|
53 |
<taxonconcept>
|
|
50 |
<taxonlabel_id>
|
|
51 |
<taxonlabel>
|
|
52 |
<matched_label_id>
|
|
53 |
<taxonlabel>
|
|
54 | 54 |
<creator_id> |
55 | 55 |
<party> |
56 | 56 |
<creator_id>0</creator_id> |
... | ... | |
75 | 75 |
<2>$AuthorOfScientificName</2> |
76 | 76 |
</_join_words> |
77 | 77 |
</identifyingtaxonomicname> |
78 |
</taxonconcept>
|
|
79 |
</matched_concept_id>
|
|
78 |
</taxonlabel>
|
|
79 |
</matched_label_id>
|
|
80 | 80 |
<author>$AuthorOfScientificName</author> |
81 | 81 |
<creator_id> |
82 | 82 |
<_simplifyPath> |
... | ... | |
87 | 87 |
<family>$Family</family> |
88 | 88 |
<genus>$Genus</genus> |
89 | 89 |
<parent_id> |
90 |
<taxonconcept>
|
|
90 |
<taxonlabel>
|
|
91 | 91 |
<parent_id> |
92 |
<taxonconcept>
|
|
92 |
<taxonlabel>
|
|
93 | 93 |
<rank>cultivar</rank> |
94 | 94 |
<parent_id> |
95 |
<taxonconcept>
|
|
95 |
<taxonlabel>
|
|
96 | 96 |
<rank>forma</rank> |
97 | 97 |
<parent_id> |
98 |
<taxonconcept>
|
|
98 |
<taxonlabel>
|
|
99 | 99 |
<rank>variety</rank> |
100 | 100 |
<parent_id> |
101 |
<taxonconcept>
|
|
101 |
<taxonlabel>
|
|
102 | 102 |
<rank>subspecies</rank> |
103 | 103 |
<parent_id> |
104 |
<taxonconcept>
|
|
104 |
<taxonlabel>
|
|
105 | 105 |
<rank>species</rank> |
106 | 106 |
<taxonepithet>$SpecificEpithet</taxonepithet> |
107 | 107 |
<parent_id> |
108 |
<taxonconcept>
|
|
108 |
<taxonlabel>
|
|
109 | 109 |
<rank>genus</rank> |
110 | 110 |
<taxonepithet>$Genus</taxonepithet> |
111 | 111 |
<parent_id> |
112 |
<taxonconcept>
|
|
112 |
<taxonlabel>
|
|
113 | 113 |
<rank>family</rank> |
114 | 114 |
<taxonepithet>$Family</taxonepithet> |
115 |
</taxonconcept>
|
|
115 |
</taxonlabel>
|
|
116 | 116 |
</parent_id> |
117 |
</taxonconcept>
|
|
117 |
</taxonlabel>
|
|
118 | 118 |
</parent_id> |
119 |
</taxonconcept>
|
|
119 |
</taxonlabel>
|
|
120 | 120 |
</parent_id> |
121 |
</taxonconcept>
|
|
121 |
</taxonlabel>
|
|
122 | 122 |
</parent_id> |
123 |
</taxonconcept>
|
|
123 |
</taxonlabel>
|
|
124 | 124 |
</parent_id> |
125 |
</taxonconcept>
|
|
125 |
</taxonlabel>
|
|
126 | 126 |
</parent_id> |
127 |
</taxonconcept>
|
|
127 |
</taxonlabel>
|
|
128 | 128 |
</parent_id> |
129 | 129 |
<taxonepithet>$InfraspecificEpithet</taxonepithet> |
130 |
</taxonconcept>
|
|
130 |
</taxonlabel>
|
|
131 | 131 |
</parent_id> |
132 | 132 |
<species>$SpecificEpithet</species> |
133 | 133 |
<taxonomicname>$ScientificName</taxonomicname> |
134 |
</taxonconcept>
|
|
135 |
</taxonconcept_id>
|
|
134 |
</taxonlabel>
|
|
135 |
</taxonlabel_id>
|
|
136 | 136 |
</taxondetermination> |
137 | 137 |
<taxondetermination> |
138 | 138 |
<isoriginal>true</isoriginal> |
139 |
<taxonconcept_id>
|
|
140 |
<taxonconcept>
|
|
139 |
<taxonlabel_id>
|
|
140 |
<taxonlabel>
|
|
141 | 141 |
<family>$GBIFFamilyOriginal</family> |
142 | 142 |
<genus>$GBIFGenusOriginal</genus> |
143 |
<matched_concept_id>
|
|
144 |
<taxonconcept>
|
|
143 |
<matched_label_id>
|
|
144 |
<taxonlabel>
|
|
145 | 145 |
<creator_id> |
146 | 146 |
<party> |
147 | 147 |
<creator_id>0</creator_id> |
... | ... | |
159 | 159 |
</2> |
160 | 160 |
</_alt> |
161 | 161 |
</identifyingtaxonomicname> |
162 |
</taxonconcept>
|
|
163 |
</matched_concept_id>
|
|
162 |
</taxonlabel>
|
|
163 |
</matched_label_id>
|
|
164 | 164 |
<parent_id> |
165 |
<taxonconcept>
|
|
165 |
<taxonlabel>
|
|
166 | 166 |
<parent_id> |
167 |
<taxonconcept>
|
|
167 |
<taxonlabel>
|
|
168 | 168 |
<rank>cultivar</rank> |
169 | 169 |
<parent_id> |
170 |
<taxonconcept>
|
|
170 |
<taxonlabel>
|
|
171 | 171 |
<rank>forma</rank> |
172 | 172 |
<parent_id> |
173 |
<taxonconcept>
|
|
173 |
<taxonlabel>
|
|
174 | 174 |
<rank>variety</rank> |
175 | 175 |
<parent_id> |
176 |
<taxonconcept>
|
|
176 |
<taxonlabel>
|
|
177 | 177 |
<rank>subspecies</rank> |
178 | 178 |
<parent_id> |
179 |
<taxonconcept>
|
|
179 |
<taxonlabel>
|
|
180 | 180 |
<rank>species</rank> |
181 | 181 |
<parent_id> |
182 |
<taxonconcept>
|
|
182 |
<taxonlabel>
|
|
183 | 183 |
<rank>genus</rank> |
184 | 184 |
<taxonepithet>$GBIFGenusOriginal</taxonepithet> |
185 | 185 |
<parent_id> |
186 |
<taxonconcept>
|
|
186 |
<taxonlabel>
|
|
187 | 187 |
<rank>family</rank> |
188 | 188 |
<taxonepithet>$GBIFFamilyOriginal</taxonepithet> |
189 |
</taxonconcept>
|
|
189 |
</taxonlabel>
|
|
190 | 190 |
</parent_id> |
191 |
</taxonconcept>
|
|
191 |
</taxonlabel>
|
|
192 | 192 |
</parent_id> |
193 |
</taxonconcept>
|
|
193 |
</taxonlabel>
|
|
194 | 194 |
</parent_id> |
195 |
</taxonconcept>
|
|
195 |
</taxonlabel>
|
|
196 | 196 |
</parent_id> |
197 |
</taxonconcept>
|
|
197 |
</taxonlabel>
|
|
198 | 198 |
</parent_id> |
199 |
</taxonconcept>
|
|
199 |
</taxonlabel>
|
|
200 | 200 |
</parent_id> |
201 |
</taxonconcept>
|
|
201 |
</taxonlabel>
|
|
202 | 202 |
</parent_id> |
203 |
</taxonconcept>
|
|
203 |
</taxonlabel>
|
|
204 | 204 |
</parent_id> |
205 | 205 |
<taxonomicname>$ScientificNameOriginal</taxonomicname> |
206 |
</taxonconcept>
|
|
207 |
</taxonconcept_id>
|
|
206 |
</taxonlabel>
|
|
207 |
</taxonlabel_id>
|
|
208 | 208 |
</taxondetermination> |
209 | 209 |
<verbatimcollectorname>$Collector</verbatimcollectorname> |
210 | 210 |
</taxonoccurrence> |
inputs/SpeciesLink/Specimen/VegBIEN.csv | ||
---|---|---|
96 | 96 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
97 | 97 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
98 | 98 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
99 |
conceptual_darwin_2003_1_0_ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
100 |
dwc_dwcore_ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
101 |
dwc_terms_scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
102 |
conceptual_darwin_2003_1_0_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
103 |
dwc_dwcore_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
104 |
dwc_terms_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
105 |
conceptual_darwin_2003_1_0_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
106 |
dwc_dwcore_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
107 |
dwc_terms_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
108 |
conceptual_darwin_2003_1_0_Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
109 |
dwc_dwcore_SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
110 |
dwc_terms_specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
111 |
conceptual_darwin_2003_1_0_Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4", |
|
112 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
113 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
114 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2", |
|
115 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2", |
|
116 |
dwc_terms_scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/1", |
|
117 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/2", |
|
118 |
dwc_dwcore_AuthorYearOfScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_concept_id/taxonconcept:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/3", |
|
119 |
dwc_terms_scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author/_alt/1, |
|
120 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author/_alt/2, |
|
121 |
dwc_dwcore_AuthorYearOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/author/_alt/3, |
|
122 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
123 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
124 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
125 |
conceptual_darwin_2003_1_0_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
|
126 |
dwc_dwcore_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
|
127 |
dwc_terms_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/family, |
|
128 |
conceptual_darwin_2003_1_0_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
|
129 |
dwc_dwcore_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
|
130 |
dwc_terms_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/genus, |
|
131 |
conceptual_darwin_2003_1_0_Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=subspecies]/taxonepithet", |
|
132 |
conceptual_darwin_2003_1_0_Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet", |
|
133 |
dwc_dwcore_SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet", |
|
134 |
dwc_terms_specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=species]/taxonepithet", |
|
135 |
conceptual_darwin_2003_1_0_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet", |
|
136 |
dwc_dwcore_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet", |
|
137 |
dwc_terms_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=genus]/taxonepithet", |
|
138 |
conceptual_darwin_2003_1_0_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet", |
|
139 |
dwc_dwcore_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet", |
|
140 |
dwc_terms_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=family]/taxonepithet", |
|
141 |
conceptual_darwin_2003_1_0_Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=order]/taxonepithet", |
|
142 |
dwc_dwcore_Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=order]/taxonepithet", |
|
143 |
dwc_terms_order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=order]/taxonepithet", |
|
144 |
conceptual_darwin_2003_1_0_Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonepithet", |
|
145 |
dwc_dwcore_Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonepithet", |
|
146 |
dwc_terms_class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=class]/taxonepithet", |
|
147 |
conceptual_darwin_2003_1_0_Phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonepithet", |
|
148 |
dwc_dwcore_Phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonepithet", |
|
149 |
dwc_terms_phylum,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=phylum]/taxonepithet", |
|
150 |
conceptual_darwin_2003_1_0_Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonepithet", |
|
151 |
dwc_dwcore_Kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonepithet", |
|
152 |
dwc_terms_kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonconcept[rank=_val]/parent_id""]/taxonconcept[rank=kingdom]/taxonepithet", |
|
153 |
dwc_dwcore_InfraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonepithet, |
|
154 |
dwc_terms_infraspecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/parent_id/taxonconcept/taxonepithet, |
|
155 |
conceptual_darwin_2003_1_0_Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
|
156 |
dwc_dwcore_SpecificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
|
157 |
dwc_terms_specificEpithet,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/species, |
|
158 |
conceptual_darwin_2003_1_0_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
|
159 |
dwc_dwcore_ScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
|
160 |
dwc_terms_scientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonconcept/taxonomicname, |
|
99 |
conceptual_darwin_2003_1_0_ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
100 |
dwc_dwcore_ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
101 |
dwc_terms_scientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/1", |
|
102 |
conceptual_darwin_2003_1_0_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
103 |
dwc_dwcore_Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
104 |
dwc_terms_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/1", |
|
105 |
conceptual_darwin_2003_1_0_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
106 |
dwc_dwcore_Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
107 |
dwc_terms_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/2", |
|
108 |
conceptual_darwin_2003_1_0_Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
109 |
dwc_dwcore_SpecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
110 |
dwc_terms_specificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1", |
|
111 |
conceptual_darwin_2003_1_0_Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/4", |
|
112 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
113 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/cond", |
|
114 |
dwc_dwcore_InfraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2", |
|
115 |
dwc_terms_infraspecificEpithet,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2", |
|
116 |
dwc_terms_scientificNameAuthorship,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/1", |
|
117 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/2", |
|
118 |
dwc_dwcore_AuthorYearOfScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/_if[@name=""if has explicit parent""]/else/_if[@name=""if has verbatim name""]/{then/.,else/matched_label_id/taxonlabel:[creator_id/party:[creator_id=0]/organizationname=TNRS]}/identifyingtaxonomicname/_alt/2/_join_words/2/_alt/3", |
|
119 |
dwc_terms_scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author/_alt/1, |
|
120 |
conceptual_darwin_2003_1_0_ScientificNameAuthor,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author/_alt/2, |
|
121 |
dwc_dwcore_AuthorYearOfScientificName,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/author/_alt/3, |
|
122 |
conceptual_darwin_2003_1_0_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
123 |
dwc_curatorial_IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
124 |
dwc_terms_identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/creator_id/_simplifyPath:[next=creator_id]/path/party/fullname/_alt/2, |
|
125 |
conceptual_darwin_2003_1_0_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family, |
|
126 |
dwc_dwcore_Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family, |
|
127 |
dwc_terms_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/family, |
|
128 |
conceptual_darwin_2003_1_0_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus, |
|
129 |
dwc_dwcore_Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus, |
|
130 |
dwc_terms_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonlabel/genus, |
Also available in: Unified diff
schemas/vegbien.sql: Renamed taxonconcept to taxonlabel per today's conference call, where it was decided that taxonconcept contained too many unrelated fields to be purely a taxon concept