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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5591 about 12 years Aaron Marcuse-Kubitza sql_io.py: import_csv(): Take a reader and head...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5638 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  lib 5594 about 12 years Aaron Marcuse-Kubitza sql_io.py: import_csv(): Add a row_num column a...
  mappings 5638 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  schemas 5638 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.86 KB 5459 about 12 years Aaron Marcuse-Kubitza Makefile: Moved setting of $(root) before inclu...
README.TXT 12.9 KB 5563 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: import_all: Added NCBI...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5638 10/18/2012 12:25 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel: Renamed taxonomicname to binomial because it excludes the author
5637 10/18/2012 12:15 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel.taxonomicname, taxonomicnamewithauthor comments: Corrected to show that taxonomicnamewithauthor is actually scientificName, while taxonomicname does not directly correspond to a DwC term (but would be the binomial)
5636 10/18/2012 12:13 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel.taxonomicnamewithauthor comment: Removed no longer applicable 'Equivalent to "Name sec. x"'. The "sec" is now stored in taxonconcept.concept_reference_id.
5635 10/18/2012 12:10 PM Aaron Marcuse-Kubitza

mappings/Makefile: .VegCore.csv.last_cleanup: Remove duplicate entries using uniq
5634 10/18/2012 12:09 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Removed duplicate entries using uniq
5633 10/18/2012 12:06 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Removed *scientificNameWithAuthorship, which are now represented by *scientificName
5632 10/18/2012 12:04 PM Aaron Marcuse-Kubitza

mappings: Renamed *scientificNameWithAuthorship to *scientificName because scientificNameWithAuthorship is actually a synonym of DwC's scientificName ("The full scientific name, with authorship and date information if known" <http://rs.tdwg.org/dwc/terms/#scientificName&gt;)
5631 10/18/2012 11:57 AM Aaron Marcuse-Kubitza

mappings: Renamed *scientificName to *binomial because DwC defines the scientificName as "The full scientific name, with authorship and date information if known", but many datasources do not include the author in their scientific name, and the fields scientificName is mapped to in VegBIEN assume it does not include the author
5630 10/18/2012 11:44 AM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Added verbatimBinomial
5629 10/18/2012 11:41 AM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Redefined *binomial to "Taxonomic name without author", rather than genus+species

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