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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5643 about 12 years Aaron Marcuse-Kubitza tnrs_db: Fixed bug where needed to remove inter...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5639 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  lib 5642 about 12 years Aaron Marcuse-Kubitza sql.py: mk_select(): Don't add table0 to order_...
  mappings 5639 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  schemas 5639 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonlabel: Renamed taxono...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.86 KB 5459 about 12 years Aaron Marcuse-Kubitza Makefile: Moved setting of $(root) before inclu...
README.TXT 12.9 KB 5563 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: import_all: Added NCBI...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5643 10/18/2012 01:05 PM Aaron Marcuse-Kubitza

tnrs_db: Fixed bug where needed to remove internal identifyingtaxonomicname duplicates as well as duplicates with existing Name_submitted values, to avoid violating the TNRS.tnrs pkey constraint when the scrubbed names are later inserted. Note that the taxonlabel_0_unique_identifying_name unique index is not sufficient to prevent internal duplicates, because it includes the creator_id (and thus allows multiple instances of the same name defined by different creators).

5642 10/18/2012 01:01 PM Aaron Marcuse-Kubitza

sql.py: mk_select(): Don't add table0 to order_by with no table, because this could cause it not to match a corresponding DISTINCT ON column with no explicit table. PostgreSQL apparently does not treat a column with no explicit table and a column with the applicable table as identical for purposes of ORDER BY/DISTINCT ON checking, even when they refer to the same physical column.

5641 10/18/2012 12:53 PM Aaron Marcuse-Kubitza

sql.py: mk_select(): order_by defaults to first distinct_on column when distinct_on provided

5640 10/18/2012 12:36 PM Aaron Marcuse-Kubitza

tnrs_db: Updated with schema changes

5639 10/18/2012 12:33 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel: Renamed taxonomicnamewithauthor to taxonomicname because it is equivalent to Darwin Core's scientificName

5638 10/18/2012 12:25 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel: Renamed taxonomicname to binomial because it excludes the author

5637 10/18/2012 12:15 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel.taxonomicname, taxonomicnamewithauthor comments: Corrected to show that taxonomicnamewithauthor is actually scientificName, while taxonomicname does not directly correspond to a DwC term (but would be the binomial)

5636 10/18/2012 12:13 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonlabel.taxonomicnamewithauthor comment: Removed no longer applicable 'Equivalent to "Name sec. x"'. The "sec" is now stored in taxonconcept.concept_reference_id.

5635 10/18/2012 12:10 PM Aaron Marcuse-Kubitza

mappings/Makefile: .VegCore.csv.last_cleanup: Remove duplicate entries using uniq

5634 10/18/2012 12:09 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Removed duplicate entries using uniq

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