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Revision 5675

Added by Aaron Marcuse-Kubitza over 12 years ago

mappings/VegCore-VegBIEN.csv: Do not place taxonomicStatus in taxonlabel if a morphospecies was provided, to prevent it from being incorrectly marked as accepted

View differences:

inputs/.TNRS/tnrs/VegBIEN.csv
54 54 
Name_matched_rank,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",
55 55 
Infraspecific_epithet_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/2,
56 56 
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/2,Contains author based on matched name
57 
Taxonomic_status,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus,
57 
Unmatched_terms,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/cond",
58 
Taxonomic_status,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/else",
58 59 
Name_matched_author,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,Contains author based on matched name
59 60 
Name_matched,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/binomial,
60 61 
Name_matched_accepted_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,Contains family based on matched name
inputs/.TNRS/tnrs/test.xml.ref
184 184 
                                                    <2>$Name_matched_author</2>
185 185 
                                                </_join_words>
186 186 
                                            </taxonomicname>
187 
                                            <taxonstatus>$Taxonomic_status</taxonstatus>
187 
                                            <taxonstatus>
188 
                                                <_if name="not accepted if morphospecies">
189 
                                                    <cond>$Unmatched_terms</cond>
190 
                                                    <else>$Taxonomic_status</else>
191 
                                                </_if>
192 
                                            </taxonstatus>
188 193 
                                        </taxonlabel>
189 194 
                                    </taxonlabel_id>
190 195 
                                    <author>$Name_matched_author</author>
mappings/VegCore-VegBIEN.csv
241 241 
forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""fm. ""]/2",
242 242 
cultivar,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/1/_alt/2/_join_words/9/_join_words:[1=""cult. ""]/2",
243 243 
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_alt/2/_join_words/2,
244 
taxonomicStatus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus,
244 
morphospecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/cond",
245 
taxonomicStatus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/else",
245 246 
scientificNameAuthorship,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/author,
246 247 
binomial,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/binomial,
247 248 
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
mappings/for_review/VegCore-VegBIEN.csv
241 241 
forma,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
242 242 
cultivar,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
243 243 
scientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname,
244 
taxonomicStatus,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/*_id/taxonlabel/taxonstatus,
244 
morphospecies,"//taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/cond",
245 
taxonomicStatus,"//taxonlabel/taxonstatus/_if[@name=""not accepted if morphospecies""]/else",
245 246 
scientificNameAuthorship,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/author,
246 247 
binomial,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/binomial,
247 248 
family,//taxonoccurrence/taxondetermination[]/*_id/taxonverbatim/family,

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