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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 over 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5737 over 12 years Aaron Marcuse-Kubitza inputs/.TNRS/tnrs/: Added Time_submitted column...
  config 272 about 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5747 over 12 years Aaron Marcuse-Kubitza inputs/.TNRS/tnrs/map.csv: Added new Time_submi...
  lib 5736 over 12 years Aaron Marcuse-Kubitza csvs.py: RowNumFilter: Use new ColInsertFilter
  mappings 5743 over 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: TNRS<->NCBI attac...
  schemas 5749 over 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_db_view: Fixed ...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 over 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.87 KB 5679 over 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: Schemas: schemas/rot...
README.TXT 13 KB 5684 over 12 years Aaron Marcuse-Kubitza README.TXT: Documentation: To import and scrub ...
map 989 Bytes 5158 over 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5749 10/23/2012 12:10 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_db_view: Fixed bug where needed to take morphospecies from the parsed taxonlabel's taxonverbatim, where it has been parsed out, instead of the datasource's taxonverbatim, which has it as part of the verbatim input name

5748 10/23/2012 11:58 AM Aaron Marcuse-Kubitza

analytical_db_view: Added stemobservation.xposition_m, yposition_m

5747 10/23/2012 11:46 AM Aaron Marcuse-Kubitza

inputs/.TNRS/tnrs/map.csv: Added new Time_submitted field

5746 10/23/2012 11:45 AM Aaron Marcuse-Kubitza

inputs/REMIB/Specimen/header.csv: Regenerated for new staging tables format

5745 10/23/2012 11:41 AM Aaron Marcuse-Kubitza

inputs/.TNRS/tnrs/test.xml.ref: Accepted correct inserted row count, which most likely became detached from the primary row count when the TNRS cache was cleared and repopulated with test data

5744 10/23/2012 11:28 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_db_view: Reordered joins in path order, putting datasource before location. This will enable more naturally reusing the SELECT query for other analyses.

5743 10/23/2012 11:15 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: TNRS<->NCBI attachment: Do not include rank in the mapping because taxonomicname is globally unique, and thus it isn't used in looking up the NCBI taxonlabel

5742 10/23/2012 11:05 AM Aaron Marcuse-Kubitza

inputs/test_taxonomic_names/_scrub/public.test_taxonomic_names.sql, TNRS.sql: Regenerated with schema and mappings changes

5741 10/23/2012 10:49 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: TNRS<->NCBI attachment: Also attach TNRS genus to NCBI backbone. This causes attachment to be made with as many of family and genus as are provided and have an entry in NCBI.

5740 10/23/2012 10:45 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: family -> NCBI backbone: Removed extra path after _if statement's cond/_exists

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