Revision 594
Added by Aaron Marcuse-Kubitza almost 13 years ago
| test/accepted_output/SALVIAS.organisms.VegBIEN.xml | ||
|---|---|---|
| 68 | 68 |
<definedvalue>T</definedvalue> |
| 69 | 69 |
</definedvalue> |
| 70 | 70 |
<determinationtype>Author</determinationtype> |
| 71 |
<originaldetermination>false</originaldetermination> |
|
| 72 | 71 |
<currentdetermination>true</currentdetermination> |
| 73 | 72 |
<party_id> |
| 74 | 73 |
<party/> |
| ... | ... | |
| 84 | 83 |
<definedvalue>10</definedvalue> |
| 85 | 84 |
</definedvalue> |
| 86 | 85 |
<originaldetermination>true</originaldetermination> |
| 87 |
<determinationdate>epoch</determinationdate> |
|
| 88 | 86 |
<plantconcept_id> |
| 89 | 87 |
<plantconcept> |
| 90 | 88 |
<reference_id> |
| ... | ... | |
| 108 | 106 |
<plantconcept> |
| 109 | 107 |
<plantstatus> |
| 110 | 108 |
<plantlevel>Family</plantlevel> |
| 111 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 112 |
<startdate>epoch</startdate> |
|
| 113 |
<party_id> |
|
| 114 |
<party/> |
|
| 115 |
</party_id> |
|
| 116 | 109 |
</plantstatus> |
| 117 | 110 |
<reference_id> |
| 118 | 111 |
<reference/> |
| ... | ... | |
| 125 | 118 |
</plantconcept> |
| 126 | 119 |
</plantconcept_id> |
| 127 | 120 |
<determinationtype>Computer (automated)</determinationtype> |
| 128 |
<originaldetermination>false</originaldetermination> |
|
| 129 | 121 |
<currentdetermination>true</currentdetermination> |
| 130 |
<determinationdate>epoch</determinationdate> |
|
| 131 | 122 |
<party_id> |
| 132 | 123 |
<party/> |
| 133 | 124 |
</party_id> |
| ... | ... | |
| 142 | 133 |
<plantconcept> |
| 143 | 134 |
<plantstatus> |
| 144 | 135 |
<plantlevel>Genus</plantlevel> |
| 145 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 146 |
<startdate>epoch</startdate> |
|
| 147 |
<party_id> |
|
| 148 |
<party/> |
|
| 149 |
</party_id> |
|
| 150 | 136 |
</plantstatus> |
| 151 | 137 |
<reference_id> |
| 152 | 138 |
<reference/> |
| ... | ... | |
| 159 | 145 |
</plantconcept> |
| 160 | 146 |
</plantconcept_id> |
| 161 | 147 |
<determinationtype>Computer (automated)</determinationtype> |
| 162 |
<originaldetermination>false</originaldetermination> |
|
| 163 | 148 |
<currentdetermination>true</currentdetermination> |
| 164 |
<determinationdate>epoch</determinationdate> |
|
| 165 | 149 |
<party_id> |
| 166 | 150 |
<party/> |
| 167 | 151 |
</party_id> |
| ... | ... | |
| 176 | 160 |
<plantconcept> |
| 177 | 161 |
<plantstatus> |
| 178 | 162 |
<plantlevel>Species</plantlevel> |
| 179 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 180 |
<startdate>epoch</startdate> |
|
| 181 |
<party_id> |
|
| 182 |
<party/> |
|
| 183 |
</party_id> |
|
| 184 | 163 |
</plantstatus> |
| 185 | 164 |
<reference_id> |
| 186 | 165 |
<reference/> |
| ... | ... | |
| 193 | 172 |
</plantconcept> |
| 194 | 173 |
</plantconcept_id> |
| 195 | 174 |
<determinationtype>Computer (automated)</determinationtype> |
| 196 |
<originaldetermination>false</originaldetermination> |
|
| 197 | 175 |
<currentdetermination>true</currentdetermination> |
| 198 |
<determinationdate>epoch</determinationdate> |
|
| 199 | 176 |
<party_id> |
| 200 | 177 |
<party/> |
| 201 | 178 |
</party_id> |
| ... | ... | |
| 210 | 187 |
<plantconcept> |
| 211 | 188 |
<plantstatus> |
| 212 | 189 |
<plantlevel>Family</plantlevel> |
| 213 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 214 |
<startdate>epoch</startdate> |
|
| 215 |
<party_id> |
|
| 216 |
<party/> |
|
| 217 |
</party_id> |
|
| 218 | 190 |
</plantstatus> |
| 219 | 191 |
<reference_id> |
| 220 | 192 |
<reference/> |
| ... | ... | |
| 229 | 201 |
<determinationtype>Author</determinationtype> |
| 230 | 202 |
<originaldetermination>true</originaldetermination> |
| 231 | 203 |
<currentdetermination>true</currentdetermination> |
| 232 |
<determinationdate>epoch</determinationdate> |
|
| 233 | 204 |
<party_id> |
| 234 | 205 |
<party/> |
| 235 | 206 |
</party_id> |
| ... | ... | |
| 244 | 215 |
<plantconcept> |
| 245 | 216 |
<plantstatus> |
| 246 | 217 |
<plantlevel>Species</plantlevel> |
| 247 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 248 |
<startdate>epoch</startdate> |
|
| 249 |
<party_id> |
|
| 250 |
<party/> |
|
| 251 |
</party_id> |
|
| 252 | 218 |
</plantstatus> |
| 253 | 219 |
<reference_id> |
| 254 | 220 |
<reference/> |
| ... | ... | |
| 263 | 229 |
<determinationtype>Author</determinationtype> |
| 264 | 230 |
<originaldetermination>true</originaldetermination> |
| 265 | 231 |
<currentdetermination>true</currentdetermination> |
| 266 |
<determinationdate>epoch</determinationdate> |
|
| 267 | 232 |
<party_id> |
| 268 | 233 |
<party/> |
| 269 | 234 |
</party_id> |
| ... | ... | |
| 337 | 302 |
<definedvalue>T</definedvalue> |
| 338 | 303 |
</definedvalue> |
| 339 | 304 |
<determinationtype>Author</determinationtype> |
| 340 |
<originaldetermination>false</originaldetermination> |
|
| 341 | 305 |
<currentdetermination>true</currentdetermination> |
| 342 | 306 |
<party_id> |
| 343 | 307 |
<party/> |
| ... | ... | |
| 353 | 317 |
<definedvalue>100</definedvalue> |
| 354 | 318 |
</definedvalue> |
| 355 | 319 |
<originaldetermination>true</originaldetermination> |
| 356 |
<determinationdate>epoch</determinationdate> |
|
| 357 | 320 |
<plantconcept_id> |
| 358 | 321 |
<plantconcept> |
| 359 | 322 |
<reference_id> |
| ... | ... | |
| 377 | 340 |
<plantconcept> |
| 378 | 341 |
<plantstatus> |
| 379 | 342 |
<plantlevel>Family</plantlevel> |
| 380 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 381 |
<startdate>epoch</startdate> |
|
| 382 |
<party_id> |
|
| 383 |
<party/> |
|
| 384 |
</party_id> |
|
| 385 | 343 |
</plantstatus> |
| 386 | 344 |
<reference_id> |
| 387 | 345 |
<reference/> |
| ... | ... | |
| 394 | 352 |
</plantconcept> |
| 395 | 353 |
</plantconcept_id> |
| 396 | 354 |
<determinationtype>Computer (automated)</determinationtype> |
| 397 |
<originaldetermination>false</originaldetermination> |
|
| 398 | 355 |
<currentdetermination>true</currentdetermination> |
| 399 |
<determinationdate>epoch</determinationdate> |
|
| 400 | 356 |
<party_id> |
| 401 | 357 |
<party/> |
| 402 | 358 |
</party_id> |
| ... | ... | |
| 411 | 367 |
<plantconcept> |
| 412 | 368 |
<plantstatus> |
| 413 | 369 |
<plantlevel>Genus</plantlevel> |
| 414 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 415 |
<startdate>epoch</startdate> |
|
| 416 |
<party_id> |
|
| 417 |
<party/> |
|
| 418 |
</party_id> |
|
| 419 | 370 |
</plantstatus> |
| 420 | 371 |
<reference_id> |
| 421 | 372 |
<reference/> |
| ... | ... | |
| 428 | 379 |
</plantconcept> |
| 429 | 380 |
</plantconcept_id> |
| 430 | 381 |
<determinationtype>Computer (automated)</determinationtype> |
| 431 |
<originaldetermination>false</originaldetermination> |
|
| 432 | 382 |
<currentdetermination>true</currentdetermination> |
| 433 |
<determinationdate>epoch</determinationdate> |
|
| 434 | 383 |
<party_id> |
| 435 | 384 |
<party/> |
| 436 | 385 |
</party_id> |
| ... | ... | |
| 445 | 394 |
<plantconcept> |
| 446 | 395 |
<plantstatus> |
| 447 | 396 |
<plantlevel>Species</plantlevel> |
| 448 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 449 |
<startdate>epoch</startdate> |
|
| 450 |
<party_id> |
|
| 451 |
<party/> |
|
| 452 |
</party_id> |
|
| 453 | 397 |
</plantstatus> |
| 454 | 398 |
<reference_id> |
| 455 | 399 |
<reference/> |
| ... | ... | |
| 462 | 406 |
</plantconcept> |
| 463 | 407 |
</plantconcept_id> |
| 464 | 408 |
<determinationtype>Computer (automated)</determinationtype> |
| 465 |
<originaldetermination>false</originaldetermination> |
|
| 466 | 409 |
<currentdetermination>true</currentdetermination> |
| 467 |
<determinationdate>epoch</determinationdate> |
|
| 468 | 410 |
<party_id> |
| 469 | 411 |
<party/> |
| 470 | 412 |
</party_id> |
| ... | ... | |
| 479 | 421 |
<plantconcept> |
| 480 | 422 |
<plantstatus> |
| 481 | 423 |
<plantlevel>Family</plantlevel> |
| 482 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 483 |
<startdate>epoch</startdate> |
|
| 484 |
<party_id> |
|
| 485 |
<party/> |
|
| 486 |
</party_id> |
|
| 487 | 424 |
</plantstatus> |
| 488 | 425 |
<reference_id> |
| 489 | 426 |
<reference/> |
| ... | ... | |
| 498 | 435 |
<determinationtype>Author</determinationtype> |
| 499 | 436 |
<originaldetermination>true</originaldetermination> |
| 500 | 437 |
<currentdetermination>true</currentdetermination> |
| 501 |
<determinationdate>epoch</determinationdate> |
|
| 502 | 438 |
<party_id> |
| 503 | 439 |
<party/> |
| 504 | 440 |
</party_id> |
| ... | ... | |
| 513 | 449 |
<plantconcept> |
| 514 | 450 |
<plantstatus> |
| 515 | 451 |
<plantlevel>Species</plantlevel> |
| 516 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 517 |
<startdate>epoch</startdate> |
|
| 518 |
<party_id> |
|
| 519 |
<party/> |
|
| 520 |
</party_id> |
|
| 521 | 452 |
</plantstatus> |
| 522 | 453 |
<reference_id> |
| 523 | 454 |
<reference/> |
| ... | ... | |
| 532 | 463 |
<determinationtype>Author</determinationtype> |
| 533 | 464 |
<originaldetermination>true</originaldetermination> |
| 534 | 465 |
<currentdetermination>true</currentdetermination> |
| 535 |
<determinationdate>epoch</determinationdate> |
|
| 536 | 466 |
<party_id> |
| 537 | 467 |
<party/> |
| 538 | 468 |
</party_id> |
| test/accepted_output/SALVIAS_db.organisms.VegBIEN.xml | ||
|---|---|---|
| 55 | 55 |
<definedvalue>T</definedvalue> |
| 56 | 56 |
</definedvalue> |
| 57 | 57 |
<determinationtype>Author</determinationtype> |
| 58 |
<originaldetermination>false</originaldetermination> |
|
| 59 | 58 |
<currentdetermination>true</currentdetermination> |
| 60 | 59 |
<party_id> |
| 61 | 60 |
<party/> |
| ... | ... | |
| 71 | 70 |
<definedvalue>1</definedvalue> |
| 72 | 71 |
</definedvalue> |
| 73 | 72 |
<originaldetermination>true</originaldetermination> |
| 74 |
<determinationdate>epoch</determinationdate> |
|
| 75 | 73 |
<plantconcept_id> |
| 76 | 74 |
<plantconcept> |
| 77 | 75 |
<reference_id> |
| ... | ... | |
| 95 | 93 |
<plantconcept> |
| 96 | 94 |
<plantstatus> |
| 97 | 95 |
<plantlevel>Authority</plantlevel> |
| 98 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 99 |
<startdate>epoch</startdate> |
|
| 100 |
<party_id> |
|
| 101 |
<party/> |
|
| 102 |
</party_id> |
|
| 103 | 96 |
</plantstatus> |
| 104 | 97 |
<reference_id> |
| 105 | 98 |
<reference/> |
| ... | ... | |
| 112 | 105 |
</plantconcept> |
| 113 | 106 |
</plantconcept_id> |
| 114 | 107 |
<determinationtype>Computer (automated)</determinationtype> |
| 115 |
<originaldetermination>false</originaldetermination> |
|
| 116 | 108 |
<currentdetermination>true</currentdetermination> |
| 117 |
<determinationdate>epoch</determinationdate> |
|
| 118 | 109 |
<party_id> |
| 119 | 110 |
<party/> |
| 120 | 111 |
</party_id> |
| ... | ... | |
| 129 | 120 |
<plantconcept> |
| 130 | 121 |
<plantstatus> |
| 131 | 122 |
<plantlevel>Family</plantlevel> |
| 132 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 133 |
<startdate>epoch</startdate> |
|
| 134 |
<party_id> |
|
| 135 |
<party/> |
|
| 136 |
</party_id> |
|
| 137 | 123 |
</plantstatus> |
| 138 | 124 |
<reference_id> |
| 139 | 125 |
<reference/> |
| ... | ... | |
| 146 | 132 |
</plantconcept> |
| 147 | 133 |
</plantconcept_id> |
| 148 | 134 |
<determinationtype>Computer (automated)</determinationtype> |
| 149 |
<originaldetermination>false</originaldetermination> |
|
| 150 | 135 |
<currentdetermination>true</currentdetermination> |
| 151 |
<determinationdate>epoch</determinationdate> |
|
| 152 | 136 |
<party_id> |
| 153 | 137 |
<party/> |
| 154 | 138 |
</party_id> |
| ... | ... | |
| 163 | 147 |
<plantconcept> |
| 164 | 148 |
<plantstatus> |
| 165 | 149 |
<plantlevel>Genus</plantlevel> |
| 166 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 167 |
<startdate>epoch</startdate> |
|
| 168 |
<party_id> |
|
| 169 |
<party/> |
|
| 170 |
</party_id> |
|
| 171 | 150 |
</plantstatus> |
| 172 | 151 |
<reference_id> |
| 173 | 152 |
<reference/> |
| ... | ... | |
| 180 | 159 |
</plantconcept> |
| 181 | 160 |
</plantconcept_id> |
| 182 | 161 |
<determinationtype>Computer (automated)</determinationtype> |
| 183 |
<originaldetermination>false</originaldetermination> |
|
| 184 | 162 |
<currentdetermination>true</currentdetermination> |
| 185 |
<determinationdate>epoch</determinationdate> |
|
| 186 | 163 |
<party_id> |
| 187 | 164 |
<party/> |
| 188 | 165 |
</party_id> |
| ... | ... | |
| 197 | 174 |
<plantconcept> |
| 198 | 175 |
<plantstatus> |
| 199 | 176 |
<plantlevel>Species</plantlevel> |
| 200 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 201 |
<startdate>epoch</startdate> |
|
| 202 |
<party_id> |
|
| 203 |
<party/> |
|
| 204 |
</party_id> |
|
| 205 | 177 |
</plantstatus> |
| 206 | 178 |
<reference_id> |
| 207 | 179 |
<reference/> |
| ... | ... | |
| 214 | 186 |
</plantconcept> |
| 215 | 187 |
</plantconcept_id> |
| 216 | 188 |
<determinationtype>Computer (automated)</determinationtype> |
| 217 |
<originaldetermination>false</originaldetermination> |
|
| 218 | 189 |
<currentdetermination>true</currentdetermination> |
| 219 |
<determinationdate>epoch</determinationdate> |
|
| 220 | 190 |
<party_id> |
| 221 | 191 |
<party/> |
| 222 | 192 |
</party_id> |
| ... | ... | |
| 231 | 201 |
<plantconcept> |
| 232 | 202 |
<plantstatus> |
| 233 | 203 |
<plantlevel>Family</plantlevel> |
| 234 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 235 |
<startdate>epoch</startdate> |
|
| 236 |
<party_id> |
|
| 237 |
<party/> |
|
| 238 |
</party_id> |
|
| 239 | 204 |
</plantstatus> |
| 240 | 205 |
<reference_id> |
| 241 | 206 |
<reference/> |
| ... | ... | |
| 250 | 215 |
<determinationtype>Author</determinationtype> |
| 251 | 216 |
<originaldetermination>true</originaldetermination> |
| 252 | 217 |
<currentdetermination>true</currentdetermination> |
| 253 |
<determinationdate>epoch</determinationdate> |
|
| 254 | 218 |
<party_id> |
| 255 | 219 |
<party/> |
| 256 | 220 |
</party_id> |
| ... | ... | |
| 265 | 229 |
<plantconcept> |
| 266 | 230 |
<plantstatus> |
| 267 | 231 |
<plantlevel>Species</plantlevel> |
| 268 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 269 |
<startdate>epoch</startdate> |
|
| 270 |
<party_id> |
|
| 271 |
<party/> |
|
| 272 |
</party_id> |
|
| 273 | 232 |
</plantstatus> |
| 274 | 233 |
<reference_id> |
| 275 | 234 |
<reference/> |
| ... | ... | |
| 284 | 243 |
<determinationtype>Author</determinationtype> |
| 285 | 244 |
<originaldetermination>true</originaldetermination> |
| 286 | 245 |
<currentdetermination>true</currentdetermination> |
| 287 |
<determinationdate>epoch</determinationdate> |
|
| 288 | 246 |
<party_id> |
| 289 | 247 |
<party/> |
| 290 | 248 |
</party_id> |
| ... | ... | |
| 351 | 309 |
<definedvalue>T</definedvalue> |
| 352 | 310 |
</definedvalue> |
| 353 | 311 |
<determinationtype>Author</determinationtype> |
| 354 |
<originaldetermination>false</originaldetermination> |
|
| 355 | 312 |
<currentdetermination>true</currentdetermination> |
| 356 | 313 |
<party_id> |
| 357 | 314 |
<party/> |
| ... | ... | |
| 367 | 324 |
<definedvalue>2</definedvalue> |
| 368 | 325 |
</definedvalue> |
| 369 | 326 |
<originaldetermination>true</originaldetermination> |
| 370 |
<determinationdate>epoch</determinationdate> |
|
| 371 | 327 |
<plantconcept_id> |
| 372 | 328 |
<plantconcept> |
| 373 | 329 |
<reference_id> |
| ... | ... | |
| 391 | 347 |
<plantconcept> |
| 392 | 348 |
<plantstatus> |
| 393 | 349 |
<plantlevel>Authority</plantlevel> |
| 394 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 395 |
<startdate>epoch</startdate> |
|
| 396 |
<party_id> |
|
| 397 |
<party/> |
|
| 398 |
</party_id> |
|
| 399 | 350 |
</plantstatus> |
| 400 | 351 |
<reference_id> |
| 401 | 352 |
<reference/> |
| ... | ... | |
| 408 | 359 |
</plantconcept> |
| 409 | 360 |
</plantconcept_id> |
| 410 | 361 |
<determinationtype>Computer (automated)</determinationtype> |
| 411 |
<originaldetermination>false</originaldetermination> |
|
| 412 | 362 |
<currentdetermination>true</currentdetermination> |
| 413 |
<determinationdate>epoch</determinationdate> |
|
| 414 | 363 |
<party_id> |
| 415 | 364 |
<party/> |
| 416 | 365 |
</party_id> |
| ... | ... | |
| 425 | 374 |
<plantconcept> |
| 426 | 375 |
<plantstatus> |
| 427 | 376 |
<plantlevel>Family</plantlevel> |
| 428 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 429 |
<startdate>epoch</startdate> |
|
| 430 |
<party_id> |
|
| 431 |
<party/> |
|
| 432 |
</party_id> |
|
| 433 | 377 |
</plantstatus> |
| 434 | 378 |
<reference_id> |
| 435 | 379 |
<reference/> |
| ... | ... | |
| 442 | 386 |
</plantconcept> |
| 443 | 387 |
</plantconcept_id> |
| 444 | 388 |
<determinationtype>Computer (automated)</determinationtype> |
| 445 |
<originaldetermination>false</originaldetermination> |
|
| 446 | 389 |
<currentdetermination>true</currentdetermination> |
| 447 |
<determinationdate>epoch</determinationdate> |
|
| 448 | 390 |
<party_id> |
| 449 | 391 |
<party/> |
| 450 | 392 |
</party_id> |
| ... | ... | |
| 459 | 401 |
<plantconcept> |
| 460 | 402 |
<plantstatus> |
| 461 | 403 |
<plantlevel>Genus</plantlevel> |
| 462 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 463 |
<startdate>epoch</startdate> |
|
| 464 |
<party_id> |
|
| 465 |
<party/> |
|
| 466 |
</party_id> |
|
| 467 | 404 |
</plantstatus> |
| 468 | 405 |
<reference_id> |
| 469 | 406 |
<reference/> |
| ... | ... | |
| 476 | 413 |
</plantconcept> |
| 477 | 414 |
</plantconcept_id> |
| 478 | 415 |
<determinationtype>Computer (automated)</determinationtype> |
| 479 |
<originaldetermination>false</originaldetermination> |
|
| 480 | 416 |
<currentdetermination>true</currentdetermination> |
| 481 |
<determinationdate>epoch</determinationdate> |
|
| 482 | 417 |
<party_id> |
| 483 | 418 |
<party/> |
| 484 | 419 |
</party_id> |
| ... | ... | |
| 493 | 428 |
<plantconcept> |
| 494 | 429 |
<plantstatus> |
| 495 | 430 |
<plantlevel>Species</plantlevel> |
| 496 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 497 |
<startdate>epoch</startdate> |
|
| 498 |
<party_id> |
|
| 499 |
<party/> |
|
| 500 |
</party_id> |
|
| 501 | 431 |
</plantstatus> |
| 502 | 432 |
<reference_id> |
| 503 | 433 |
<reference/> |
| ... | ... | |
| 510 | 440 |
</plantconcept> |
| 511 | 441 |
</plantconcept_id> |
| 512 | 442 |
<determinationtype>Computer (automated)</determinationtype> |
| 513 |
<originaldetermination>false</originaldetermination> |
|
| 514 | 443 |
<currentdetermination>true</currentdetermination> |
| 515 |
<determinationdate>epoch</determinationdate> |
|
| 516 | 444 |
<party_id> |
| 517 | 445 |
<party/> |
| 518 | 446 |
</party_id> |
| ... | ... | |
| 527 | 455 |
<plantconcept> |
| 528 | 456 |
<plantstatus> |
| 529 | 457 |
<plantlevel>Family</plantlevel> |
| 530 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 531 |
<startdate>epoch</startdate> |
|
| 532 |
<party_id> |
|
| 533 |
<party/> |
|
| 534 |
</party_id> |
|
| 535 | 458 |
</plantstatus> |
| 536 | 459 |
<reference_id> |
| 537 | 460 |
<reference/> |
| ... | ... | |
| 546 | 469 |
<determinationtype>Author</determinationtype> |
| 547 | 470 |
<originaldetermination>true</originaldetermination> |
| 548 | 471 |
<currentdetermination>true</currentdetermination> |
| 549 |
<determinationdate>epoch</determinationdate> |
|
| 550 | 472 |
<party_id> |
| 551 | 473 |
<party/> |
| 552 | 474 |
</party_id> |
| ... | ... | |
| 561 | 483 |
<plantconcept> |
| 562 | 484 |
<plantstatus> |
| 563 | 485 |
<plantlevel>Species</plantlevel> |
| 564 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 565 |
<startdate>epoch</startdate> |
|
| 566 |
<party_id> |
|
| 567 |
<party/> |
|
| 568 |
</party_id> |
|
| 569 | 486 |
</plantstatus> |
| 570 | 487 |
<reference_id> |
| 571 | 488 |
<reference/> |
| ... | ... | |
| 580 | 497 |
<determinationtype>Author</determinationtype> |
| 581 | 498 |
<originaldetermination>true</originaldetermination> |
| 582 | 499 |
<currentdetermination>true</currentdetermination> |
| 583 |
<determinationdate>epoch</determinationdate> |
|
| 584 | 500 |
<party_id> |
| 585 | 501 |
<party/> |
| 586 | 502 |
</party_id> |
| test/accepted_output/NYBG.organisms.VegBIEN.xml | ||
|---|---|---|
| 99 | 99 |
<determinationtype>Author</determinationtype> |
| 100 | 100 |
<originaldetermination>true</originaldetermination> |
| 101 | 101 |
<currentdetermination>true</currentdetermination> |
| 102 |
<determinationdate>epoch</determinationdate> |
|
| 103 | 102 |
<party_id> |
| 104 | 103 |
<party/> |
| 105 | 104 |
</party_id> |
| ... | ... | |
| 126 | 125 |
<plantconcept> |
| 127 | 126 |
<plantstatus> |
| 128 | 127 |
<plantlevel>Authority</plantlevel> |
| 129 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 130 |
<startdate>epoch</startdate> |
|
| 131 |
<party_id> |
|
| 132 |
<party/> |
|
| 133 |
</party_id> |
|
| 134 | 128 |
</plantstatus> |
| 135 | 129 |
<reference_id> |
| 136 | 130 |
<reference/> |
| ... | ... | |
| 145 | 139 |
<determinationtype>Author</determinationtype> |
| 146 | 140 |
<originaldetermination>true</originaldetermination> |
| 147 | 141 |
<currentdetermination>true</currentdetermination> |
| 148 |
<determinationdate>epoch</determinationdate> |
|
| 149 | 142 |
<party_id> |
| 150 | 143 |
<party/> |
| 151 | 144 |
</party_id> |
| ... | ... | |
| 160 | 153 |
<plantconcept> |
| 161 | 154 |
<plantstatus> |
| 162 | 155 |
<plantlevel>Family</plantlevel> |
| 163 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 164 |
<startdate>epoch</startdate> |
|
| 165 |
<party_id> |
|
| 166 |
<party/> |
|
| 167 |
</party_id> |
|
| 168 | 156 |
</plantstatus> |
| 169 | 157 |
<reference_id> |
| 170 | 158 |
<reference/> |
| ... | ... | |
| 179 | 167 |
<determinationtype>Author</determinationtype> |
| 180 | 168 |
<originaldetermination>true</originaldetermination> |
| 181 | 169 |
<currentdetermination>true</currentdetermination> |
| 182 |
<determinationdate>epoch</determinationdate> |
|
| 183 | 170 |
<party_id> |
| 184 | 171 |
<party/> |
| 185 | 172 |
</party_id> |
| ... | ... | |
| 194 | 181 |
<plantconcept> |
| 195 | 182 |
<plantstatus> |
| 196 | 183 |
<plantlevel>Genus</plantlevel> |
| 197 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 198 |
<startdate>epoch</startdate> |
|
| 199 |
<party_id> |
|
| 200 |
<party/> |
|
| 201 |
</party_id> |
|
| 202 | 184 |
</plantstatus> |
| 203 | 185 |
<reference_id> |
| 204 | 186 |
<reference/> |
| ... | ... | |
| 213 | 195 |
<determinationtype>Author</determinationtype> |
| 214 | 196 |
<originaldetermination>true</originaldetermination> |
| 215 | 197 |
<currentdetermination>true</currentdetermination> |
| 216 |
<determinationdate>epoch</determinationdate> |
|
| 217 | 198 |
<party_id> |
| 218 | 199 |
<party/> |
| 219 | 200 |
</party_id> |
| ... | ... | |
| 228 | 209 |
<plantconcept> |
| 229 | 210 |
<plantstatus> |
| 230 | 211 |
<plantlevel>Kingdom</plantlevel> |
| 231 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 232 |
<startdate>epoch</startdate> |
|
| 233 |
<party_id> |
|
| 234 |
<party/> |
|
| 235 |
</party_id> |
|
| 236 | 212 |
</plantstatus> |
| 237 | 213 |
<reference_id> |
| 238 | 214 |
<reference/> |
| ... | ... | |
| 247 | 223 |
<determinationtype>Author</determinationtype> |
| 248 | 224 |
<originaldetermination>true</originaldetermination> |
| 249 | 225 |
<currentdetermination>true</currentdetermination> |
| 250 |
<determinationdate>epoch</determinationdate> |
|
| 251 | 226 |
<party_id> |
| 252 | 227 |
<party/> |
| 253 | 228 |
</party_id> |
| ... | ... | |
| 262 | 237 |
<plantconcept> |
| 263 | 238 |
<plantstatus> |
| 264 | 239 |
<plantlevel>Subkingdom</plantlevel> |
| 265 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 266 |
<startdate>epoch</startdate> |
|
| 267 |
<party_id> |
|
| 268 |
<party/> |
|
| 269 |
</party_id> |
|
| 270 | 240 |
</plantstatus> |
| 271 | 241 |
<reference_id> |
| 272 | 242 |
<reference/> |
| ... | ... | |
| 281 | 251 |
<determinationtype>Author</determinationtype> |
| 282 | 252 |
<originaldetermination>true</originaldetermination> |
| 283 | 253 |
<currentdetermination>true</currentdetermination> |
| 284 |
<determinationdate>epoch</determinationdate> |
|
| 285 | 254 |
<party_id> |
| 286 | 255 |
<party/> |
| 287 | 256 |
</party_id> |
| ... | ... | |
| 296 | 265 |
<plantconcept> |
| 297 | 266 |
<plantstatus> |
| 298 | 267 |
<plantlevel>Species</plantlevel> |
| 299 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 300 |
<startdate>epoch</startdate> |
|
| 301 |
<party_id> |
|
| 302 |
<party/> |
|
| 303 |
</party_id> |
|
| 304 | 268 |
</plantstatus> |
| 305 | 269 |
<reference_id> |
| 306 | 270 |
<reference/> |
| ... | ... | |
| 315 | 279 |
<determinationtype>Author</determinationtype> |
| 316 | 280 |
<originaldetermination>true</originaldetermination> |
| 317 | 281 |
<currentdetermination>true</currentdetermination> |
| 318 |
<determinationdate>epoch</determinationdate> |
|
| 319 | 282 |
<party_id> |
| 320 | 283 |
<party/> |
| 321 | 284 |
</party_id> |
| ... | ... | |
| 384 | 347 |
<determinationtype>Author</determinationtype> |
| 385 | 348 |
<originaldetermination>true</originaldetermination> |
| 386 | 349 |
<currentdetermination>true</currentdetermination> |
| 387 |
<determinationdate>epoch</determinationdate> |
|
| 388 | 350 |
<party_id> |
| 389 | 351 |
<party/> |
| 390 | 352 |
</party_id> |
| ... | ... | |
| 411 | 373 |
<plantconcept> |
| 412 | 374 |
<plantstatus> |
| 413 | 375 |
<plantlevel>Family</plantlevel> |
| 414 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 415 |
<startdate>epoch</startdate> |
|
| 416 |
<party_id> |
|
| 417 |
<party/> |
|
| 418 |
</party_id> |
|
| 419 | 376 |
</plantstatus> |
| 420 | 377 |
<reference_id> |
| 421 | 378 |
<reference/> |
| ... | ... | |
| 430 | 387 |
<determinationtype>Author</determinationtype> |
| 431 | 388 |
<originaldetermination>true</originaldetermination> |
| 432 | 389 |
<currentdetermination>true</currentdetermination> |
| 433 |
<determinationdate>epoch</determinationdate> |
|
| 434 | 390 |
<party_id> |
| 435 | 391 |
<party/> |
| 436 | 392 |
</party_id> |
| ... | ... | |
| 445 | 401 |
<plantconcept> |
| 446 | 402 |
<plantstatus> |
| 447 | 403 |
<plantlevel>Kingdom</plantlevel> |
| 448 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 449 |
<startdate>epoch</startdate> |
|
| 450 |
<party_id> |
|
| 451 |
<party/> |
|
| 452 |
</party_id> |
|
| 453 | 404 |
</plantstatus> |
| 454 | 405 |
<reference_id> |
| 455 | 406 |
<reference/> |
| ... | ... | |
| 464 | 415 |
<determinationtype>Author</determinationtype> |
| 465 | 416 |
<originaldetermination>true</originaldetermination> |
| 466 | 417 |
<currentdetermination>true</currentdetermination> |
| 467 |
<determinationdate>epoch</determinationdate> |
|
| 468 | 418 |
<party_id> |
| 469 | 419 |
<party/> |
| 470 | 420 |
</party_id> |
| ... | ... | |
| 479 | 429 |
<plantconcept> |
| 480 | 430 |
<plantstatus> |
| 481 | 431 |
<plantlevel>Subkingdom</plantlevel> |
| 482 |
<plantconceptstatus>accepted</plantconceptstatus> |
|
| 483 |
<startdate>epoch</startdate> |
|
| 484 |
<party_id> |
|
| 485 |
<party/> |
|
| 486 |
</party_id> |
|
| 487 | 432 |
</plantstatus> |
| 488 | 433 |
<reference_id> |
| 489 | 434 |
<reference/> |
| ... | ... | |
| 498 | 443 |
<determinationtype>Author</determinationtype> |
| 499 | 444 |
<originaldetermination>true</originaldetermination> |
| 500 | 445 |
<currentdetermination>true</currentdetermination> |
| 501 |
<determinationdate>epoch</determinationdate> |
|
| 502 | 446 |
<party_id> |
| 503 | 447 |
<party/> |
| 504 | 448 |
</party_id> |
| inputs/SALVIAS/maps/VegBIEN.organisms.csv | ||
|---|---|---|
| 18 | 18 |
cfaff,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=cfAff]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
| 19 | 19 |
DetType,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=determinationType]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
| 20 | 20 |
Habit,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=habit]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait." |
| 21 |
Ind,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
|
|
| 22 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/notes",
|
|
| 23 |
auth,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 24 |
Family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 25 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 26 |
Species,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 27 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/first}",
|
|
| 28 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/last",
|
|
| 29 |
OrigFamily,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 30 |
OrigSpecies,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 21 |
Ind,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
|
| 22 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/notes", |
|
| 23 |
auth,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 24 |
Family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 25 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 26 |
Species,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 27 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[*_id/reference]/_name/first}",
|
|
| 28 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/_name/last",
|
|
| 29 |
OrigFamily,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 30 |
OrigSpecies,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 31 | 31 |
PlotObsID,":[aggregateoccurrence/count/_alt/2=1]/{aggregateoccurrence/individualplant/authorplantcode,specimen:[*_id/reference]/sourceaccessioncode,*_id/locationevent/authoreventcode/_alt/2,*_id/locationevent/*_id/location:[confidentialitystatus=0]/authorlocationcode/_alt/3}","Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
|
| mappings/SALVIAS_db-VegBIEN.organisms.csv | ||
|---|---|---|
| 18 | 18 |
cfaff,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=cfAff]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
| 19 | 19 |
DetType,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=determinationType]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
| 20 | 20 |
Habit,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=habit]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait." |
| 21 |
Ind,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
|
|
| 22 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/notes",
|
|
| 23 |
auth,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 24 |
Family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 25 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 26 |
Species,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 27 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/first}",
|
|
| 28 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/last",
|
|
| 29 |
OrigFamily,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 30 |
OrigSpecies,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 21 |
Ind,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
|
| 22 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/notes", |
|
| 23 |
auth,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 24 |
Family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 25 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 26 |
Species,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 27 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[*_id/reference]/_name/first}",
|
|
| 28 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/_name/last",
|
|
| 29 |
OrigFamily,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 30 |
OrigSpecies,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 31 | 31 |
PlotObsID,":[aggregateoccurrence/count/_alt/2=1]/{aggregateoccurrence/individualplant/authorplantcode,specimen:[*_id/reference]/sourceaccessioncode,*_id/locationevent/authoreventcode/_alt/2,*_id/locationevent/*_id/location:[confidentialitystatus=0]/authorlocationcode/_alt/3}","Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
|
| mappings/VegX-VegBIEN.organisms.csv | ||
|---|---|---|
| 100 | 100 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/groupType","/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=determinationType]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 101 | 101 |
/simpleUserdefined[name=habit]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=habit]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 102 | 102 |
/*ID->/*s/individualOrganism/simpleUserdefined[name=sex]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
| 103 |
/simpleUserdefined[name=individualCode]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue"
|
|
| 104 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/notes"
|
|
| 105 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/1"
|
|
| 106 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=auth])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 107 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 108 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 109 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 110 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/first}"
|
|
| 111 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/last"
|
|
| 103 |
/simpleUserdefined[name=individualCode]/value,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue" |
|
| 104 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/note/text,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/notes" |
|
| 105 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonName)/Simple","/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/1" |
|
| 106 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=auth])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 107 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 108 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 109 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 110 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Rank","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[*_id/reference]/_name/first}"
|
|
| 111 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=computer]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=TaxonomicRankBelowSubspeciesEnum])/Name","/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/_name/last"
|
|
| 112 | 112 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/date/_date/day","/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/day" |
| 113 | 113 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/date/_date/month","/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/month" |
| 114 | 114 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/date/_date/year","/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/year" |
| 115 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/partyWithRole/*ID->/parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}","/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,originaldetermination=false,currentdetermination=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}"
|
|
| 116 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=auth])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 117 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 118 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 119 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 120 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 121 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 122 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 123 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname"
|
|
| 124 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}"
|
|
| 115 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/partyWithRole/*ID->/parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}","/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,currentdetermination=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}"
|
|
| 116 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=auth])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 117 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=cl])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 118 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=fam])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 119 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=gen])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 120 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=reg])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 121 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ord])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 122 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=phyl_div])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname"
|
|
| 123 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=ssp])/Name","/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname" |
|
| 124 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=identifier]/*s/taxonRelationshipAssertion(/assertion/*ID->/*s/taxonConcept[Rank/@code=sp])/Name","/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname}"
|
|
| 125 | 125 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/voucher,":[aggregateoccurrence/count/_alt/2=1]/{aggregateoccurrence/individualplant/authorplantcode,specimen:[*_id/reference]/sourceaccessioncode,*_id/locationevent/authoreventcode/_alt/2,*_id/locationevent/*_id/location:[confidentialitystatus=0]/authorlocationcode/_alt/3}"
|
| mappings/NYBG-VegBIEN.organisms.csv | ||
|---|---|---|
| 24 | 24 |
InstitutionCode,/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/first},
|
| 25 | 25 |
CollectionCode,"/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
|
| 26 | 26 |
Sex,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
| 27 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes"
|
|
| 28 |
ScientificName,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?"
|
|
| 27 |
Notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/notes","Brad: mapping OK; NY appears to be using this field for almost anything, but mostly internal collections notes" |
|
| 28 |
ScientificName,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/1","Brad: Bob, Nick, please is this mapping OK?" |
|
| 29 | 29 |
DayIdentified,"/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/day", |
| 30 | 30 |
MonthIdentified,"/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/month", |
| 31 | 31 |
YearIdentified,"/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]/determinationdate/_date/year", |
| 32 |
IdentifiedBy,"/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,originaldetermination=false,currentdetermination=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?
|
|
| 33 |
ScientificNameAuthor,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author"
|
|
| 34 |
Class,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 35 |
Family,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 36 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 37 |
Kingdom,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 38 |
Order,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 39 |
Phylum,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 40 |
Subspecies,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 41 |
Species,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}",
|
|
| 32 |
IdentifiedBy,"/taxondetermination[role_id/aux_role/rolecode=identifier,!*_id/plantconcept]:[determinationtype=Author,currentdetermination=true]/*_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Bob: does this look correct for VegBank?
|
|
| 33 |
ScientificNameAuthor,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname","Brad: Mapping probably incorrect. This DwC element refers to scientific name author; does not correspond to the VegBank and VegX elements you have listed (Bob, Nick�where does name author belong in VegBank and VegX?); Aaron: The mapped VegX element is the author linked to the taxon name, so it seems like this is the scientific name author"
|
|
| 34 |
Class,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Class]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 35 |
Family,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 36 |
Genus,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 37 |
Kingdom,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Kingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 38 |
Order,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Order]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 39 |
Phylum,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subkingdom]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 40 |
Subspecies,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname", |
|
| 41 |
Species,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname}",
|
|
| 42 | 42 |
UniqueNYInternalRecordNumber,":[aggregateoccurrence/count/_alt/2=1]/{aggregateoccurrence/individualplant/authorplantcode,specimen:[*_id/reference]/sourceaccessioncode,*_id/locationevent/authoreventcode/_alt/2,*_id/locationevent/*_id/location:[confidentialitystatus=0]/authorlocationcode/_alt/3}","Brad: OMIT; Aaron: We need this field because it is the only ID column with an entry in every row; Brad: OK, use this as primary key"
|
| mappings/SALVIAS-VegBIEN.organisms.csv | ||
|---|---|---|
| 27 | 27 |
cf_aff,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=cfAff]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Not sure where this goes. Indicator of identification uncertainty. 'cf.'=similar to the species listed, 'aff.'=related to the species list, but not the same. You'll need to check with Bob and with Nick where these go in VegX and VegBank." |
| 28 | 28 |
det_type,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=determinationType]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
| 29 | 29 |
habit,"/taxondetermination[role_id/aux_role/rolecode=collector]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=habit]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect for VegBank, correct for VegX. This is growth form (tree, shrub, herb, etc.). It is an observation of a trait." |
| 30 |
individual_code,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot."
|
|
| 31 |
notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=false,currentdetermination=true,*_id/party]/notes",
|
|
| 32 |
specific_authority,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 33 |
family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 34 |
genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 35 |
specific_epithet,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",
|
|
| 36 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/first}",
|
|
| 37 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",originaldetermination=false,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/_name/last",
|
|
| 38 |
orig_family,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 39 |
orig_species,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,determinationdate=epoch,*_id/party]/*_id/plantconcept:[plantstatus:[plantconceptstatus=accepted,startdate=epoch,*_id/party],*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 30 |
individual_code,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=individualCode]:[userdefinedtype=varchar]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
|
| 31 |
notes,"/taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,currentdetermination=true,*_id/party]/notes", |
|
| 32 |
specific_authority,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss.
|
|
| 33 |
family,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 34 |
genus,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 35 |
specific_epithet,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",
|
|
| 36 |
infra_rank_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]/{*_id/*/plantname/_name/first,*_id/plantconcept:[*_id/reference]/_name/first}",
|
|
| 37 |
infra_ep_1,"/taxondetermination[role_id/aux_role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Subspecies]:[determinationtype=""Computer (automated)"",currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/_name/last",
|
|
| 38 |
orig_family,"/taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname",Brad: OMIT
|
|
| 39 |
orig_species,"/{taxondetermination[role_id/aux_role/rolecode=collector]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname/_alt/2,taxondetermination[role_id/aux_role/rolecode=identifier,*_id/plantconcept/plantstatus/plantlevel=Species]:[determinationtype=Author,originaldetermination=true,currentdetermination=true,*_id/party]/*_id/plantconcept:[*_id/reference]/*_id/*/plantname}",Brad: OMIT
|
|
| 40 | 40 |
OBSERVATION_ID,":[aggregateoccurrence/count/_alt/2=1]/{aggregateoccurrence/individualplant/authorplantcode,specimen:[*_id/reference]/sourceaccessioncode,*_id/locationevent/authoreventcode/_alt/2,*_id/locationevent/*_id/location:[confidentialitystatus=0]/authorlocationcode/_alt/3}","Brad: Neither is correct; this is just an internal ID for table plotObservations. However, it has the important property of uniquely identifying an ""observation"", which is an individual tree, in the case of an individual observation, or a records of a species with an associated count of individuals or measurement of percent cover, in the case of aggregate observations. Not sure where to store this. Main point is that it is not part of the original data, but an auto_increment added later."
|
Also available in: Unified diff
VegX-VegBIEN mappings: Took advantage of several fields becoming optional