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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 5944 about 12 years Aaron Marcuse-Kubitza import_all: Added geoscrub import, which can ha...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 5949 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Don't populate ta...
  lib 5939 about 12 years Aaron Marcuse-Kubitza lib/common.Makefile: SVN: $(add*): Fixed bug wh...
  mappings 5950 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Remapped accordin...
  schemas 5948 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: taxonverbatim: Renamed bin...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 4523 about 12 years Aaron Marcuse-Kubitza Added validation/
Makefile 9.87 KB 5679 about 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: Schemas: schemas/rot...
README.TXT 12.6 KB 5917 about 12 years Aaron Marcuse-Kubitza Calls to `make inputs/.TNRS/cleanup`: Do `make ...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
5950 11/01/2012 09:47 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Remapped accordingTo to taxonconcept.concept_reference_id

5949 11/01/2012 09:46 AM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Don't populate taxonlabel.creator_id using identifiedBy, because that was meant for creating a taxonconcept when the accordingTo was not specified, but taxonconcepts are now modeled differently using a taxonconcept subclass of taxonlabel with a concept_reference_id

5948 11/01/2012 09:36 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: taxonverbatim: Renamed binomial to taxonname because this field is actually the taxonomic name without the author, not just the genus+specific epithet binomial

5947 11/01/2012 09:29 AM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Renamed *Binomial to *TaxonName because this field can store more ranks than just the genus+specificEpithet binomial (that goes in speciesBinomial)

5946 11/01/2012 09:22 AM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Renamed taxonName to taxonNameOrEpithet for clarity

5945 11/01/2012 09:16 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_aggregate_view: Added growthForm, cultivated, cultivatedBasis from analytical_stem. Note that this will create multiple entries for a taxon name when some taxonoccurrences are marked as cultivated and others aren't, or different taxonoccurrences have different growthform entries.

5944 11/01/2012 09:01 AM Aaron Marcuse-Kubitza

import_all: Added geoscrub import, which can happen concurrently with NCBI/TNRS but must come before the main datasources for the matched places to link up properly

5943 11/01/2012 08:59 AM Aaron Marcuse-Kubitza

import_all: Documented that TNRS import must come after NCBI for cross links to be made

5942 11/01/2012 08:53 AM Aaron Marcuse-Kubitza

input.Makefile: Staging tables installation: `%.sql: _MySQL/%.sql`, etc.: Only run if target does not exist, to avoid regenerating the target when a .make script which generates the target's prerequisite is checked out from svn (causing its mod time to be newer than the target)

5941 11/01/2012 08:24 AM Aaron Marcuse-Kubitza

Added inputs/.geoscrub/

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