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Name Size Revision Age Author Comment
  _archive 1598 over 12 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 4751 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Backups: Full DB: Specify the...
  bin 6028 about 12 years Aaron Marcuse-Kubitza pg_dump_vegbien: Except in (raw) data mode, fil...
  config 272 almost 13 years Aaron Marcuse-Kubitza Moved bien_password to new config dir
  inputs 6035 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Always map taxonN...
  lib 6027 about 12 years Aaron Marcuse-Kubitza lib/PostgreSQL-MySQL.csv: Remove SELECT pg_cata...
  mappings 6035 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Always map taxonN...
  schemas 6037 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: Added family_higher_plant_...
  to_do 4524 about 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 9.89 KB 6023 about 12 years Aaron Marcuse-Kubitza root Makefile: VegBIEN DB: DB and bien user: db...
README.TXT 12.5 KB 6015 about 12 years Aaron Marcuse-Kubitza README.TXT: Datasource setup: Moved Auto-create...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 about 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
6037 11/06/2012 04:05 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added family_higher_plant_group lookup table, generated with make_family_higher_plant_group() using the contents of higher_plant_group_nodes
6036 11/06/2012 03:40 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added family_higher_plant_group lookup table, generated with make_family_higher_plant_group() using the contents of higher_plant_group_nodes
6035 11/06/2012 03:23 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Always map taxonNameOrEpithet to taxonomicname, now that it's globally unique at all ranks in the datasource that provides it (NCBI)
6034 11/06/2012 03:18 PM Aaron Marcuse-Kubitza

inputs/.NCBI/nodes/create.sql: Make name_txt completely globally unique by removing all duplicates, not just duplicate genera
6033 11/06/2012 03:17 PM Aaron Marcuse-Kubitza

inputs/.NCBI/nodes/create.sql: Make name_txt (mostly) globally unique by removing several other kingdoms/superkingdoms, not just Animalia
6032 11/06/2012 02:56 PM Aaron Marcuse-Kubitza

inputs/.NCBI/nodes/create.sql: Making genus globally unique: Moved comment with kingdom name to line with DELETE, and put "delete cascades to descendants" comment on its own line
6031 11/06/2012 01:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added higher_plant_group_nodes lookup table
6030 11/06/2012 01:57 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: Added higher_plant_group_nodes lookup table
6029 11/06/2012 01:49 PM Aaron Marcuse-Kubitza

schemas/Makefile: DDLs: $(pg_dump): Turn off schema-only mode so that lookup table contents are included as well
6028 11/06/2012 01:47 PM Aaron Marcuse-Kubitza

pg_dump_vegbien: Except in (raw) data mode, filter out pg_catalog.setval() statements (only lookup table contents should be preserved)

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