Revision 614
Added by Aaron Marcuse-Kubitza almost 13 years ago
test/accepted_output/SALVIAS.organisms.VegBIEN.xml | ||
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58 | 58 |
<reference/> |
59 | 59 |
</reference_id> |
60 | 60 |
<catalognumber_dwc>14598</catalognumber_dwc> |
61 |
<collector_id> |
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62 |
<party> |
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63 |
<surname>Vasquez</surname> |
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64 |
</party> |
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65 |
</collector_id> |
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61 |
<verbatimcollectorname>Vasquez</verbatimcollectorname> |
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66 | 62 |
<sourceaccessioncode>607771</sourceaccessioncode> |
67 | 63 |
</specimen> |
68 | 64 |
<taxondetermination> |
... | ... | |
231 | 227 |
<reference/> |
232 | 228 |
</reference_id> |
233 | 229 |
<catalognumber_dwc>14669</catalognumber_dwc> |
234 |
<collector_id> |
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235 |
<party> |
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236 |
<surname>Vasquez</surname> |
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237 |
</party> |
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238 |
</collector_id> |
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230 |
<verbatimcollectorname>Vasquez</verbatimcollectorname> |
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239 | 231 |
<sourceaccessioncode>607722</sourceaccessioncode> |
240 | 232 |
</specimen> |
241 | 233 |
<taxondetermination> |
test/accepted_output/NYBG.organisms.VegBIEN.xml | ||
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69 | 69 |
<reference/> |
70 | 70 |
</reference_id> |
71 | 71 |
<catalognumber_dwc>9877</catalognumber_dwc> |
72 |
<collector_id> |
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73 |
<party> |
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74 |
<givenname>R.</givenname> |
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75 |
<middlename>B.</middlename> |
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76 |
<surname>Foster</surname> |
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77 |
</party> |
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78 |
</collector_id> |
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72 |
<verbatimcollectorname>R. B. Foster</verbatimcollectorname> |
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79 | 73 |
<museum_id> |
80 | 74 |
<party> |
81 | 75 |
<organizationname>NY Herbarium</organizationname> |
... | ... | |
272 | 266 |
<reference/> |
273 | 267 |
</reference_id> |
274 | 268 |
<catalognumber_dwc>545</catalognumber_dwc> |
275 |
<collector_id> |
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276 |
<party> |
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277 |
<givenname>J.</givenname> |
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278 |
<middlename>B.</middlename> |
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279 |
<surname>Walker</surname> |
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280 |
</party> |
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281 |
</collector_id> |
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269 |
<verbatimcollectorname>J. B. Walker</verbatimcollectorname> |
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282 | 270 |
<museum_id> |
283 | 271 |
<party> |
284 | 272 |
<organizationname>NY Herbarium</organizationname> |
inputs/SALVIAS/maps/VegBIEN.organisms.csv | ||
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16 | 16 |
DetType,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
17 | 17 |
coll_number,/specimen:[*_id/reference]/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string |
18 | 18 |
census_date,/specimen:[*_id/reference]/collectiondate/_*/date, |
19 |
coll_firstname,"/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}",Brad: See comment above
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|
20 |
coll_lastname,/specimen:[*_id/reference]/collector_id/party/{surname},"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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|
19 |
coll_firstname,/specimen:[*_id/reference]/verbatimcollectorname/_name/first,Brad: See comment above
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|
20 |
coll_lastname,/specimen:[*_id/reference]/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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|
21 | 21 |
auth,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss. |
22 | 22 |
Family,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
23 | 23 |
Genus,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
mappings/SALVIAS_db-VegBIEN.organisms.csv | ||
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16 | 16 |
DetType,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
17 | 17 |
coll_number,/specimen:[*_id/reference]/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string |
18 | 18 |
census_date,/specimen:[*_id/reference]/collectiondate/_*/date, |
19 |
coll_firstname,"/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}",Brad: See comment above
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|
20 |
coll_lastname,/specimen:[*_id/reference]/collector_id/party/{surname},"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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19 |
coll_firstname,/specimen:[*_id/reference]/verbatimcollectorname/_name/first,Brad: See comment above
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20 |
coll_lastname,/specimen:[*_id/reference]/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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21 | 21 |
auth,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss. |
22 | 22 |
Family,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
23 | 23 |
Genus,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
mappings/VegX-VegBIEN.organisms.csv | ||
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92 | 92 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/authorCode,/specimen:[*_id/reference]/catalognumber_dwc |
93 | 93 |
/simpleUserdefined[name=collectionDate]/value,/specimen:[*_id/reference]/collectiondate |
94 | 94 |
/simpleUserdefined[name=collectionDate]/value/_*/date,/specimen:[*_id/reference]/collectiondate/_*/date |
95 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName","/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}" |
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96 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}","/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}" |
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97 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",/specimen:[*_id/reference]/collector_id/party/{surname} |
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98 | 95 |
/simpleUserdefined[name=collectorNumberDwc]/value,/specimen:[*_id/reference]/collectornumber_dwc |
96 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}",/specimen:[*_id/reference]/verbatimcollectorname |
|
97 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/givenName",/specimen:[*_id/reference]/verbatimcollectorname/_name/first |
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98 |
"/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept->/*s/taxonDetermination[*ID,partyWithRole/role=collector]/partyWithRole/*ID->/parties/party/individualName/surName",/specimen:[*_id/reference]/verbatimcollectorname/_name/last |
|
99 | 99 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName,"/specimen:[*_id/reference]/{museum_id/party/organizationname,collectioncode_dwc/_namePart/last}" |
100 | 100 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/first,/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/first} |
101 | 101 |
/*ID->/*s/individualOrganism/*sID->/*s/taxonNameUsageConcept/partyWithRole/*ID->/parties/party/organizationName/_name/last,"/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}" |
mappings/NYBG-VegBIEN.organisms.csv | ||
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19 | 19 |
Substrate,"/aggregateoccurrence/individualplant/stem/definedvalue[*_id/userdefined[tablename=stem,userdefinedname=substrate]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Incorrect mapping to VB and VX; refers to geological substrate or soils where specimen collected. Often concatenated with habitat, or included with specimen description. Bob, Nick, is there an element for this in VB/VX, or shall we just use userDefined?" |
20 | 20 |
Vegetation,"/aggregateoccurrence/individualplant/stem/definedvalue[*_id/userdefined[tablename=stem,userdefinedname=vegetation]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Habitat'. Bob, Nick: keep as user defined or create special element?" |
21 | 21 |
FieldNumber,/specimen:[*_id/reference]/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?" |
22 |
Collector,"/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen? |
|
23 | 22 |
CollectorNumber,/specimen:[*_id/reference]/collectornumber_dwc,"Brad: OMIT; db-specific element, not relevant to VB/VX" |
23 |
Collector,/specimen:[*_id/reference]/verbatimcollectorname,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen? |
|
24 | 24 |
InstitutionCode,/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/first}, |
25 | 25 |
CollectionCode,"/specimen:[*_id/reference]/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
26 | 26 |
Sex,"/taxondetermination[*_id/role/rolecode=identifier,!*_id/plantconcept]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]:[@fkey=tableRecord_ID]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
mappings/for_review/SALVIAS_db-VegBIEN.organisms.csv | ||
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16 | 16 |
DetType,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
17 | 17 |
coll_number,//specimen/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string |
18 | 18 |
census_date,//specimen/collectiondate/_*/date, |
19 |
coll_firstname,"/specimen/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}",Brad: See comment above
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|
20 |
coll_lastname,/specimen/collector_id/party/{surname},"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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19 |
coll_firstname,//specimen/verbatimcollectorname/_name/first,Brad: See comment above
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20 |
coll_lastname,//specimen/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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21 | 21 |
auth,"/taxondetermination[rolecode=computer,plantlevel=Authority]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss. |
22 | 22 |
Family,"/taxondetermination[rolecode=computer,plantlevel=Family]/*_id/plantconcept/*_id/*/plantname", |
23 | 23 |
Genus,"/taxondetermination[rolecode=computer,plantlevel=Genus]/*_id/plantconcept/*_id/*/plantname", |
mappings/for_review/VegX-VegBIEN.organisms.csv | ||
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92 | 92 |
//taxonNameUsageConcept/authorCode,//specimen/catalognumber_dwc |
93 | 93 |
/simpleUserdefined[name=collectionDate]/value,//specimen/collectiondate |
94 | 94 |
/simpleUserdefined[name=collectionDate]/value/_*/date,//specimen/collectiondate/_*/date |
95 |
//individualName/givenName,"/specimen/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}" |
|
96 |
"//parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}","/specimen/collector_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}" |
|
97 |
//individualName/surName,/specimen/collector_id/party/{surname} |
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98 | 95 |
/simpleUserdefined[name=collectorNumberDwc]/value,//specimen/collectornumber_dwc |
96 |
"//parties/party/individualName/{givenName/_namePart/{first,middle},surName/_namePart/last}",//specimen/verbatimcollectorname |
|
97 |
//individualName/givenName,//specimen/verbatimcollectorname/_name/first |
|
98 |
//individualName/surName,//specimen/verbatimcollectorname/_name/last |
|
99 | 99 |
//party/organizationName,"/specimen/{museum_id/party/organizationname,collectioncode_dwc/_namePart/last}" |
100 | 100 |
//party/organizationName/_name/first,/specimen/{museum_id/party/organizationname/_name/first} |
101 | 101 |
//party/organizationName/_name/last,"/specimen/{museum_id/party/organizationname/_name/last,collectioncode_dwc}" |
mappings/for_review/NYBG-VegBIEN.organisms.csv | ||
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19 | 19 |
Substrate,"//stem/definedvalue[*_id/userdefined[tablename=stem,userdefinedname=substrate]]/definedvalue","Brad: Incorrect mapping to VB and VX; refers to geological substrate or soils where specimen collected. Often concatenated with habitat, or included with specimen description. Bob, Nick, is there an element for this in VB/VX, or shall we just use userDefined?" |
20 | 20 |
Vegetation,"//stem/definedvalue[*_id/userdefined[tablename=stem,userdefinedname=vegetation]]/definedvalue","Brad: Free-text description of vegetation community where collected, frequently redundane wrt 'Habitat'. Bob, Nick: keep as user defined or create special element?" |
21 | 21 |
FieldNumber,//specimen/catalognumber_dwc,"Brad: Correct for VB, not sure about VX; Nick, is there an element in VX fo Collection Number?" |
22 |
Collector,"/specimen/collector_id/party/{givenname/_namePart/first,middlename/_namePart/middle,surname/_namePart/last}",Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen? |
|
23 | 22 |
CollectorNumber,//specimen/collectornumber_dwc,"Brad: OMIT; db-specific element, not relevant to VB/VX" |
23 |
Collector,//specimen/verbatimcollectorname,Brad: Correct for VB. Nick: is there a way to specifically identify this party as collector of a specimen? |
|
24 | 24 |
InstitutionCode,/specimen/{museum_id/party/organizationname/_name/first}, |
25 | 25 |
CollectionCode,"/specimen/{museum_id/party/organizationname/_name/last,collectioncode_dwc}",Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name |
26 | 26 |
Sex,"/taxondetermination[rolecode=identifier]/definedvalue[*_id/userdefined[tablename=taxondetermination,userdefinedname=sex]]/definedvalue","Brad: OMIT. Apparently not used by this institution and of uncertain applicability to plants. With other collections, *sometimes* used for phenological information (if specimen in flower, in fruit, sterile, etc.). If so, this is important information we should keep. Bob, Nick, anywhere for phenological information in VB and VX?; Aaron: Keeping it because it's useful for some collections" |
mappings/for_review/SALVIAS-VegBIEN.organisms.csv | ||
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25 | 25 |
individual_code,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=individualCode]]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
26 | 26 |
det_type,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
27 | 27 |
coll_number,//specimen/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string |
28 |
coll_firstname,"/specimen/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}",Brad: See comment above
|
|
29 |
coll_lastname,/specimen/collector_id/party/{surname},"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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|
28 |
coll_firstname,//specimen/verbatimcollectorname/_name/first,Brad: See comment above
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29 |
coll_lastname,//specimen/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
|
|
30 | 30 |
specific_authority,"/taxondetermination[rolecode=computer,plantlevel=Authority]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss. |
31 | 31 |
family,"/taxondetermination[rolecode=computer,plantlevel=Family]/*_id/plantconcept/*_id/*/plantname", |
32 | 32 |
genus,"/taxondetermination[rolecode=computer,plantlevel=Genus]/*_id/plantconcept/*_id/*/plantname", |
mappings/SALVIAS-VegBIEN.organisms.csv | ||
---|---|---|
25 | 25 |
individual_code,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=individualCode]]:[@fkey=tableRecord_ID]/definedvalue","Brad: Code, if any, used by the data provider to indicate an individual tree. Scope is unknown, although typically this value is unique only within plot, or sometimes only within subplot." |
26 | 26 |
det_type,"/definedvalue[*_id/userdefined[tablename=taxonoccurrence,userdefinedname=voucherType]]:[@fkey=tableRecord_ID]/definedvalue","Brad: A SALVIAS value referring to the relationship between the voucher specimen and the observation. Affect how the identification of the specimen(latin name) is transferred to the observation. 'direct'=voucher specimen was collected from this same tree; they are one and the same individual. 'indirect'=voucher specimen was collected for a different individual, but the original data provider confirmed that this is the same species. 'default'=basically same as 'indirect'. 'uncollected'=no voucher specimen, data provider asserted that this was the name but was unable to collect. The main different is that with 'direct', 'indirect', and 'default', the scientific name can be updated automatically based on the name attached to the specimen voucher (assuming you have a link to that data, presumably from a herbarium database. Whereas, if det_type='uncollected', the name can never change because there is no specimen." |
27 | 27 |
coll_number,/specimen:[*_id/reference]/catalognumber_dwc,Brad: Incorrect. Map instead as for voucher_string |
28 |
coll_firstname,"/specimen:[*_id/reference]/collector_id/party/{givenname/_namePart/first,middlename/_namePart/last}",Brad: See comment above
|
|
29 |
coll_lastname,/specimen:[*_id/reference]/collector_id/party/{surname},"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
|
|
28 |
coll_firstname,/specimen:[*_id/reference]/verbatimcollectorname/_name/first,Brad: See comment above
|
|
29 |
coll_lastname,/specimen:[*_id/reference]/verbatimcollectorname/_name/last,"Brad: Correct for VegBank. This is the collector of a separate specimen which vouchers this tree or species. I worry that vouchers are not properly accommodated in VegX. Again, we need to check with Nick."
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|
30 | 30 |
specific_authority,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Authority]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname",Brad: Incorrect. This is the author of the scientificName. The should be a place for this in the taxonomic name elements of VegB and VegX. Let's discuss. |
31 | 31 |
family,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Family]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
32 | 32 |
genus,"/taxondetermination[*_id/role/rolecode=computer,*_id/plantconcept/plantstatus/plantlevel=Genus]:[determinationtype=""Computer (automated)"",currentdetermination=true]/*_id/plantconcept/*_id/*/plantname", |
Also available in: Unified diff
VegX-VegBIEN mapping: Map collector name to new verbatimcollectorname field