Revision 6177
Added by Aaron Marcuse-Kubitza about 12 years ago
inputs/XAL/Specimen/VegBIEN.csv | ||
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17 | 17 |
darwin:InstitutionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/referencename/name, |
18 | 18 |
darwin:CollectorNumber,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/1", |
19 | 19 |
darwin:ScientificName,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/3", |
20 |
darwin:Collector,/location/locationevent/taxonoccurrence/collector_id/party/fullname, |
|
20 | 21 |
darwin:IdentifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
21 | 22 |
darwin:Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[reference_id/reference/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family", |
22 | 23 |
darwin:ScientificName,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[reference_id/reference/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/1", |
... | ... | |
51 | 52 |
darwin:DayIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/day/_nullIf:[null=0,type=float]/value", |
52 | 53 |
darwin:MonthIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/month/_nullIf:[null=0,type=float]/value", |
53 | 54 |
darwin:YearIdentified,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/2/_date/year/_nullIf:[null=0,type=float]/value", |
54 |
darwin:Collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
|
55 | 55 |
darwin:CatalogNumber,"/location/locationevent/taxonoccurrence/voucher/*_id/specimenreplicate/catalognumber_dwc/_if[@name=""if indirect voucher""]/then", |
56 | 56 |
darwin:MaximumDepth,/location/locationevent/waterdepth_m/_avg/max, |
57 | 57 |
darwin:MinimumDepth,/location/locationevent/waterdepth_m/_avg/min, |
inputs/bien_web/observation/VegBIEN.csv | ||
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18 | 18 |
plotID,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists", |
19 | 19 |
collectionNumber,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/1/_first/1", |
20 | 20 |
taxon,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/then/_first/2/_first/2", |
21 |
collector,/location/locationevent/taxonoccurrence/collector_id/party/fullname, |
|
21 | 22 |
isCultivated,/location/locationevent/taxonoccurrence/iscultivated/_alt/1, |
22 | 23 |
identifiedBy,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/party/fullname, |
23 | 24 |
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[reference_id/reference/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family", |
... | ... | |
40 | 41 |
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus, |
41 | 42 |
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet, |
42 | 43 |
taxon,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/taxonomicname, |
43 |
collector,/location/locationevent/taxonoccurrence/verbatimcollectorname, |
|
44 | 44 |
latitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value", |
45 | 45 |
longitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value", |
46 | 46 |
country,/location/locationplace/*_id/place/country, |
inputs/bien_web/observation/test.xml.ref | ||
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20 | 20 |
</plantobservation> |
21 | 21 |
</aggregateoccurrence> |
22 | 22 |
<authortaxoncode>$collectionNumber</authortaxoncode> |
23 |
<collector_id><party><fullname>$collector</fullname></party></collector_id> |
|
23 | 24 |
<iscultivated>$isCultivated</iscultivated> |
24 | 25 |
<taxondetermination> |
25 | 26 |
<party_id><party><fullname>$identifiedBy</fullname></party></party_id> |
... | ... | |
126 | 127 |
</taxonverbatim> |
127 | 128 |
</taxonverbatim_id> |
128 | 129 |
</taxondetermination> |
129 |
<verbatimcollectorname>$collector</verbatimcollectorname> |
|
130 | 130 |
</taxonoccurrence> |
131 | 131 |
</locationevent> |
132 | 132 |
<locationplace> |
Also available in: Unified diff
mappings/VegCore-VegBIEN.csv: Made taxonoccurrence.verbatimcollectorname an fkey to party, and renamed it to collector_id