Project

General

Profile

1 5915 aaronmk
Put template:
2
<VegBIEN>
3
    <_simplifyPath id="-1">
4
        <next>parent_id</next>
5
        <path>
6
            <location>
7
                <locationevent>
8
                    <taxonoccurrence>
9
                        <taxondetermination>
10
                            <taxonverbatim_id>
11
                                <taxonverbatim>
12
                                    <taxonlabel_id>
13
                                        <taxonlabel>
14 5929 aaronmk
                                            <matched_label_id>0</matched_label_id>
15 5915 aaronmk
                                            <parent_id>
16
                                                <taxonlabel>
17
                                                    <rank>$Name_matched_rank</rank>
18
                                                    <taxonverbatim><verbatimrank>$Name_matched_rank</verbatimrank></taxonverbatim>
19
                                                    <parent_id>
20
                                                        <taxonlabel>
21
                                                            <rank>cultivar</rank>
22
                                                            <parent_id>
23
                                                                <taxonlabel>
24
                                                                    <rank>forma</rank>
25
                                                                    <parent_id>
26
                                                                        <taxonlabel>
27
                                                                            <rank>variety</rank>
28
                                                                            <parent_id>
29
                                                                                <taxonlabel>
30
                                                                                    <rank>subspecies</rank>
31
                                                                                    <parent_id>
32
                                                                                        <taxonlabel>
33
                                                                                            <rank>species</rank>
34
                                                                                            <taxonepithet>$Specific_epithet_matched</taxonepithet>
35
                                                                                            <parent_id>
36
                                                                                                <taxonlabel>
37
                                                                                                    <rank>genus</rank>
38
                                                                                                    <matched_label_id>
39
                                                                                                        <taxonlabel>
40 6179 aaronmk
                                                                                                            <source_id><source><shortname>NCBI</shortname></source></source_id>
41 5915 aaronmk
                                                                                                            <taxonomicname>$Genus_matched</taxonomicname>
42
                                                                                                        </taxonlabel>
43
                                                                                                    </matched_label_id>
44
                                                                                                    <taxonepithet>$Genus_matched</taxonepithet>
45
                                                                                                    <parent_id>
46
                                                                                                        <taxonlabel>
47
                                                                                                            <rank>family</rank>
48
                                                                                                            <matched_label_id>
49
                                                                                                                <taxonlabel>
50 6179 aaronmk
                                                                                                                    <source_id><source><shortname>NCBI</shortname></source></source_id>
51 5915 aaronmk
                                                                                                                    <taxonomicname>$Name_matched_accepted_family</taxonomicname>
52
                                                                                                                </taxonlabel>
53
                                                                                                            </matched_label_id>
54
                                                                                                            <taxonepithet>$Name_matched_accepted_family</taxonepithet>
55
                                                                                                        </taxonlabel>
56
                                                                                                    </parent_id>
57
                                                                                                </taxonlabel>
58
                                                                                            </parent_id>
59
                                                                                        </taxonlabel>
60
                                                                                    </parent_id>
61
                                                                                </taxonlabel>
62
                                                                            </parent_id>
63
                                                                        </taxonlabel>
64
                                                                    </parent_id>
65
                                                                </taxonlabel>
66
                                                            </parent_id>
67
                                                        </taxonlabel>
68
                                                    </parent_id>
69
                                                    <taxonepithet>$Infraspecific_epithet_matched</taxonepithet>
70
                                                </taxonlabel>
71
                                            </parent_id>
72
                                            <rank>$Name_matched_rank</rank>
73
                                            <sourceaccessioncode>$Name_matched_url</sourceaccessioncode>
74
                                            <taxonlabel fkey="matched_label_id">
75
                                                <matched_label_fit_fraction>
76
                                                    <_max>
77
                                                        <1>$Family_score</1>
78
                                                        <2>$Genus_score</2>
79
                                                        <3>$Specific_epithet_score</3>
80
                                                        <4>$Overall_score</4>
81
                                                    </_max>
82
                                                </matched_label_fit_fraction>
83
                                                <taxonepithet>$Unmatched_terms</taxonepithet>
84
                                                <taxonomicname>$Name_submitted</taxonomicname>
85
                                                <taxonverbatim>
86
                                                    <author>$Author_matched</author>
87
                                                    <family>$Family_matched</family>
88
                                                    <genus>$Genus_matched</genus>
89
                                                    <morphospecies>$Unmatched_terms</morphospecies>
90
                                                    <specific_epithet>$Specific_epithet_matched</specific_epithet>
91 5948 aaronmk
                                                    <taxonname>$Name_matched</taxonname>
92 5915 aaronmk
                                                    <verbatimrank>$Infraspecific_rank</verbatimrank>
93
                                                </taxonverbatim>
94
                                            </taxonlabel>
95
                                            <taxonomicname>
96
                                                <_join_words>
97 6359 aaronmk
                                                    <1>
98
                                                        <_taxon_family_require_std>
99
                                                            <family>
100
                                                                <_nullIf>
101
                                                                    <null>$Name_matched</null>
102
                                                                    <value>$Name_matched_accepted_family</value>
103
                                                                </_nullIf>
104
                                                            </family>
105
                                                        </_taxon_family_require_std>
106
                                                    </1>
107 5915 aaronmk
                                                    <2>
108
                                                        <_join_words>
109
                                                            <1>
110
                                                                <_alt>
111
                                                                    <1>$Name_matched</1>
112
                                                                    <2>
113
                                                                        <_join_words>
114
                                                                            <2>$Genus_matched</2>
115
                                                                            <3>$Specific_epithet_matched</3>
116
                                                                            <5>
117
                                                                                <_join_words>
118
                                                                                    <1>
119
                                                                                        <_if name="if has infraspecificEpithet">
120
                                                                                            <cond>$Infraspecific_epithet_matched</cond>
121
                                                                                            <then>$Name_matched_rank</then>
122
                                                                                        </_if>
123
                                                                                    </1>
124
                                                                                    <2>$Infraspecific_epithet_matched</2>
125
                                                                                </_join_words>
126
                                                                            </5>
127
                                                                        </_join_words>
128
                                                                    </2>
129
                                                                </_alt>
130
                                                            </1>
131
                                                            <2>$Name_matched_author</2>
132
                                                        </_join_words>
133
                                                    </2>
134
                                                </_join_words>
135
                                            </taxonomicname>
136
                                            <taxonstatus>$Taxonomic_status</taxonstatus>
137
                                        </taxonlabel>
138
                                    </taxonlabel_id>
139
                                    <author>$Name_matched_author</author>
140
                                    <family>$Name_matched_accepted_family</family>
141
                                    <genus>$Genus_matched</genus>
142
                                    <specific_epithet>$Specific_epithet_matched</specific_epithet>
143 5948 aaronmk
                                    <taxonname>$Name_matched</taxonname>
144 5915 aaronmk
                                    <verbatimrank>$Name_matched_rank</verbatimrank>
145
                                </taxonverbatim>
146
                            </taxonverbatim_id>
147
                        </taxondetermination>
148
                    </taxonoccurrence>
149
                </locationevent>
150
            </location>
151
        </path>
152
    </_simplifyPath>
153
</VegBIEN>
154 6359 aaronmk
Inserted 18 new rows into database