| 1 |
6406
|
aaronmk
|
MT,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
|
| 2 |
6409
|
aaronmk
|
id,"/_if[@name=""if specimen""]/cond/_exists",
|
| 3 |
|
|
institutionCode,"/_if[@name=""if specimen""]/else/source/shortname/_first/1",
|
| 4 |
4336
|
aaronmk
|
id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/1",
|
| 5 |
6375
|
aaronmk
|
id,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/cond/_exists",
|
| 6 |
|
|
institutionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/1/_if[@name=""if specimen""]/then",
|
| 7 |
4949
|
aaronmk
|
collectionCode,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/1",
|
| 8 |
|
|
collectionID,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/3/_alt/2/_if[@name=""if catalogNumber""]/then/_join/2/_join/2",
|
| 9 |
6313
|
aaronmk
|
id,"/location/iscultivated/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 10 |
3982
|
aaronmk
|
individualCount,/location/locationevent/taxonoccurrence/aggregateoccurrence/count,
|
| 11 |
4327
|
aaronmk
|
collectionCode,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/1,Brad: Not sure if mapping correct. DwC element; code for entire collection; often same as InstitutionCode; Aaron: Combining with InstitutionCode to create collection name
|
| 12 |
|
|
collectionID,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/collectioncode_dwc/_join/2,
|
| 13 |
6384
|
aaronmk
|
id,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/_if[@name=""if specimen""]/cond/_exists",
|
| 14 |
|
|
institutionCode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/_if[@name=""if specimen""]/then/matched_source_id/source/shortname",
|
| 15 |
|
|
institutionCode,"/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/institution_id/sourcename/_if[@name=""if specimen""]/then/name",
|
| 16 |
3970
|
aaronmk
|
id,/location/locationevent/taxonoccurrence/aggregateoccurrence/plantobservation/specimenreplicate/sourceaccessioncode,
|
| 17 |
6313
|
aaronmk
|
id,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",
|
| 18 |
4554
|
aaronmk
|
establishmentMeans,"/location/locationevent/taxonoccurrence/iscultivated/_alt/2/_map:[cultivated=t,wild=f,*=]/value",
|
| 19 |
3969
|
aaronmk
|
establishmentMeans,"/location/locationevent/taxonoccurrence/isnative/_map:[native=t,exotic=f,*=]/value",
|
| 20 |
4834
|
aaronmk
|
id,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/3,
|
| 21 |
6359
|
aaronmk
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value",
|
| 22 |
6179
|
aaronmk
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2",
|
| 23 |
|
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 24 |
5657
|
aaronmk
|
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet",
|
| 25 |
6179
|
aaronmk
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname",
|
| 26 |
5657
|
aaronmk
|
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet",
|
| 27 |
6359
|
aaronmk
|
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value,
|
| 28 |
5788
|
aaronmk
|
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2,
|
| 29 |
5657
|
aaronmk
|
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family,
|
| 30 |
|
|
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus,
|
| 31 |
3969
|
aaronmk
|
locality,/location/locationnarrative/_merge/1,
|
| 32 |
5855
|
aaronmk
|
continent,/location/locationplace/*_id/place/continent,
|
| 33 |
4638
|
aaronmk
|
basisOfRecord,,** No join mapping for basisOfRecord **
|
| 34 |
|
|
countryCode,,** No join mapping for countryCode **
|
| 35 |
|
|
datasetName,,** No join mapping for datasetName **
|
| 36 |
|
|
language,,** No join mapping for dcterms:language **
|
| 37 |
|
|
occurrenceRemarks,,** No join mapping for occurrenceRemarks **
|
| 38 |
|
|
rights,,** No join mapping for dcterms:rights **
|
| 39 |
|
|
rightsHolder,,** No join mapping for dcterms:rightsHolder **
|
| 40 |
|
|
type,,** No join mapping for dcterms:type **
|
