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Revision 6664

inputs/.geoscrub/geoscrub_output/map.csv: *validity: Remapped 2 ("Point is <=5km from putative GADM polygon, but still outside it") to true instead of false, because 5km is close enough to the polygon that the mismatch could result from shapefile simplifying, boundary changes, or other factors that don't affect geovalidity

View differences:

inputs/.geoscrub/geoscrub_output/map.csv
8 8
stateprovincestd,acceptedStateProvince,,
9 9
countystd,acceptedCounty,,
10 10
latlonvalidity,latLongDomainValid,"/_map:[""-1""=,0=false,1=true]/value",
11
countryvalidity,latLongInCountry,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
12
stateprovincevalidity,latLongInStateProvince,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
13
countyvalidity,latLongInCounty,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
11
countryvalidity,latLongInCountry,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
12
stateprovincevalidity,latLongInStateProvince,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
13
countyvalidity,latLongInCounty,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
inputs/.geoscrub/geoscrub_output/VegBIEN.csv
1 1
geoscrub,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2
countryvalidity,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode/_if[@name=""if geovalidation""]/cond/_exists/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
2
countryvalidity,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode/_if[@name=""if geovalidation""]/cond/_exists/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
3 3
decimallatitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
4 4
decimallongitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
5 5
country,/location/locationplace/*_id/place/country,
......
11 11
stateprovincestd,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub,matched_place_id=0]/stateprovince/_first/1",
12 12
country,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/country/_first/2,
13 13
county,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/county/_first/2,Not yet used by VegBIEN (would prevent the places from matching up)
14
countryvalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/1/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
15
stateprovincevalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/2/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
16
countyvalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/3/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
14
countryvalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/1/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
15
stateprovincevalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/2/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
16
countyvalidity,"/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/geovalid/_first/2/_and/3/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
17 17
stateprovince,/location/locationplace/*_id/place/matched_place_id/place:[source_id/source/shortname=geoscrub]/stateprovince/_first/2,
18 18
stateprovince,/location/locationplace/*_id/place/stateprovince,
19 19
latlonvalidity,,"** No join mapping for latLongDomainValid/_map:[""-1""=,0=false,1=true]/value ** "
inputs/.geoscrub/geoscrub_output/test.xml.ref
63 63
                                                            <-1></-1>
64 64
                                                            <0></0>
65 65
                                                            <1>false</1>
66
                                                            <2>false</2>
66
                                                            <2>true</2>
67 67
                                                            <3>true</3>
68 68
                                                            <value>$countryvalidity</value>
69 69
                                                        </_map>
......
73 73
                                                            <-1></-1>
74 74
                                                            <0></0>
75 75
                                                            <1>false</1>
76
                                                            <2>false</2>
76
                                                            <2>true</2>
77 77
                                                            <3>true</3>
78 78
                                                            <value>$stateprovincevalidity</value>
79 79
                                                        </_map>
......
83 83
                                                            <-1></-1>
84 84
                                                            <0></0>
85 85
                                                            <1>false</1>
86
                                                            <2>false</2>
86
                                                            <2>true</2>
87 87
                                                            <3>true</3>
88 88
                                                            <value>$countyvalidity</value>
89 89
                                                        </_map>
inputs/.geoscrub/geoscrub_output/new_terms.csv
2 2
stateprovincestd,acceptedStateProvince,,
3 3
countystd,acceptedCounty,,
4 4
latlonvalidity,latLongDomainValid,"/_map:[""-1""=,0=false,1=true]/value",
5
countryvalidity,latLongInCountry,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
6
stateprovincevalidity,latLongInStateProvince,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
7
countyvalidity,latLongInCounty,"/_map:[./{""-1"",0}=,./{1,2}=false,3=true]/value",
5
countryvalidity,latLongInCountry,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
6
stateprovincevalidity,latLongInStateProvince,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",
7
countyvalidity,latLongInCounty,"/_map:[./{""-1"",0}=,1=false,./{2,3}=true]/value",

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