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| Revision:
Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 6655 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Checksums: %.md5/test: Only u...
  bin 6651 about 12 years Aaron Marcuse-Kubitza publish_analytical_db: Require caller to specif...
  config 6321 about 12 years Aaron Marcuse-Kubitza Added config/bien_read_password
  inputs 6664 about 12 years Aaron Marcuse-Kubitza inputs/.geoscrub/geoscrub_output/map.csv: *vali...
  lib 6589 about 12 years Aaron Marcuse-Kubitza csvs.py: stream_info(): Use the Excel dialect a...
  mappings 6654 about 12 years Aaron Marcuse-Kubitza mappings/VegCore.csv: cultivated* source: Added...
  schemas 6656 about 12 years Aaron Marcuse-Kubitza schemas/vegbien.sql: analytical_*: Changed type...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 12.9 KB 6544 about 12 years Aaron Marcuse-Kubitza root Makefile: apt-get: Use --yes to allow unat...
README.TXT 15.3 KB 6653 about 12 years Aaron Marcuse-Kubitza README.TXT: Data import: On nimoy: Creating ana...
map 989 Bytes 5158 about 12 years Aaron Marcuse-Kubitza root map: Removed no longer needed public schem...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
6664 12/06/2012 08:56 PM Aaron Marcuse-Kubitza

inputs/.geoscrub/geoscrub_output/map.csv: *validity: Remapped 2 ("Point is <=5km from putative GADM polygon, but still outside it") to true instead of false, because 5km is close enough to the polygon that the mismatch could result from shapefile simplifying, boundary changes, or other factors that don't affect geovalidity

6663 12/06/2012 08:52 PM Aaron Marcuse-Kubitza

inputs/.geoscrub/geoscrub_output/map.csv: *validity: Remapped 0 ("Complete name provided, but couldn't be scrubbed to GADM") to NULL instead of false, because the absence of a name match does not mean the coordinates are invalid

6662 12/06/2012 08:51 PM Aaron Marcuse-Kubitza

inputs/.{NCBI,TNRS}/import_order.txt: Added Source

6661 12/06/2012 08:50 PM Aaron Marcuse-Kubitza

input.Makefile: SVN: add: Add a Source table to store datasource metadata. This adds a Source table to all herbaria which are listed in .herbaria, and therefore didn't previously need a Source table to indicate their referenceType and sampleType.

6660 12/06/2012 08:44 PM Aaron Marcuse-Kubitza

input.Makefile: SVN: add: Add a Source table to store datasource metadata. This adds a Source table to all herbaria which are listed in .herbaria, and therefore didn't previously need a Source table to indicate their referenceType and sampleType.

6659 12/06/2012 08:43 PM Aaron Marcuse-Kubitza

inputs/input.Makefile: SVN: add: verify/: Added *.xls to svn:ignore

6658 12/06/2012 08:33 PM Aaron Marcuse-Kubitza

inputs/.geoscrub/geoscrub_output/postprocess.sql: Added index on decimallatitude, decimallongitude

6657 12/06/2012 08:30 PM Aaron Marcuse-Kubitza

Added inputs/.geoscrub/geoscrub_output/postprocess.sql, which adds NOT NULL constraints on decimallatitude, decimallongitude

6656 12/06/2012 06:55 PM Aaron Marcuse-Kubitza

schemas/vegbien.sql: analytical_*: Changed type of boolean columns to integer so that they will be exported as 1/0 instead of t/f by export_analytical_db. This will enable MySQL's LOAD DATA INFILE to import the values correctly.

6655 12/06/2012 06:07 PM Aaron Marcuse-Kubitza

backups/Makefile: Checksums: %.md5/test: Only use md5sum's -v option on Mac, because it's not supported on Linux (there, verbose mode is the default)

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