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1 6406 aaronmk
Madidi,VegBIEN:/_setDefault:[source_id/source/shortname/_env:[name=source]]/path/_simplifyPath:[next=parent_id]/path,Comments
2 4336 aaronmk
Inventory name,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/1",
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Inventory code,"/location/_if[@name=""if subplot""]/else/authorlocationcode/_first/2/_if[@name=""if locationID""]/cond/_exists",
4 5905 aaronmk
Inventory code,"/location/_if[@name=""if subplot""]/else/sourceaccessioncode/_if[@name=""if geovalidation""]/else",
5 4324 aaronmk
Inventory name,"/location/_if[@name=""if subplot""]/then/parent_id/location/authorlocationcode",
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Inventory code,"/location/_if[@name=""if subplot""]/then/parent_id/location/sourceaccessioncode",
7 4767 aaronmk
Area,/location/area_m2/_ha_to_m2/value,"""0.1 ha transects"" (""Madidi Transects"" description in <https://projects.nceas.ucsb.edu/nceas/projects/bien/repository/raw/inputs/BIEN2.datasources.xlsx>)"
8 4798 aaronmk
Altitude,/location/elevation_m/_alt/1,"Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Altitude""::real, ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Altitude"" IS NOT NULL AND ""Altitude"" != ' 1430'
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GROUP BY ""Altitude""::real , ""Locality""
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ORDER BY ""Altitude""::real DESC
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
19 4807 aaronmk
Minimum altitude,/location/elevation_m/_alt/2/_avg/max/_rangeEnd/value,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Minimum altitude"", ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Minimum altitude"" IS NOT NULL
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GROUP BY ""Minimum altitude"" , ""Locality""
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
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Minimum altitude,/location/elevation_m/_alt/2/_avg/min/_rangeStart/value,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Minimum altitude"", ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Minimum altitude"" IS NOT NULL
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GROUP BY ""Minimum altitude"" , ""Locality""
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
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Minimum altitude,/location/elevationrange_m/_range/from/_rangeStart/value,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Minimum altitude"", ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Minimum altitude"" IS NOT NULL
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GROUP BY ""Minimum altitude"" , ""Locality""
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-----
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
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Minimum altitude,/location/elevationrange_m/_range/to/_rangeEnd/value,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Minimum altitude"", ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Minimum altitude"" IS NOT NULL
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GROUP BY ""Minimum altitude"" , ""Locality""
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-----
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
59 6432 aaronmk
Locality,/location/iscultivated/_or/2/_locationnarrative_is_cultivated/locationnarrative/_join/1,
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Topographical situation,/location/landform,
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Expedition name,/location/locationevent/*_id/project/projectname,Consistent (globally unique) between PPM and PT data
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Expedition number,/location/locationevent/*_id/project/sourceaccessioncode,Consistent (globally unique) between PPM and PT data
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First evaluation,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/cond/_exists",
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Inventory name,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/authorlocationcode/_if[@name=""if subplot""]/then",
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Inventory code,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/*_id/location/sourceaccessioncode/_if[@name=""if subplot""]/then",
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First evaluation,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsenddate/_alt/2/_dateRangeEnd/value",
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First evaluation,"/location/locationevent/_if[@name=""if subplot""]/then/_if[@name=""if has event""]/then/parent_id/locationevent/obsstartdate/_alt/2/_dateRangeStart/value",
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Vegetation type,/location/locationevent/commclass/commdetermination/*_id/commconcept/*_id/*/commname,
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Locality description,/location/locationevent/commclass/commdetermination/*_id/commconcept/commdescription,Often begins with the text in Vegetation type
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First evaluation,/location/locationevent/obsenddate/_alt/2/_dateRangeEnd/value,
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First evaluation,/location/locationevent/obsstartdate/_alt/2/_dateRangeStart/value,
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Acidez intercambiable (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilsample/acidity_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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"Calcio intercambiable (WSP S-5,10–cmolc/Kg–0.016)",/location/locationevent/soilsample/calcium_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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"Carbón Orgánico (WSP S-9,10–%–0.06)",/location/locationevent/soilsample/carbon_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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CIC (ISRIC 11–cmolc/Kg–0.05),/location/locationevent/soilsample/cationexchangecapacity_cmol_kg,
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Arcilla (DIN 18 123–%–1),/location/locationevent/soilsample/clay_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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Conductividad electrica (ASPT 6–µS/cm– 1 - 10000),/location/locationevent/soilsample/conductivity,
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"Magnesio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilsample/magnesium_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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Nitrógeno total (ISRIC 6–%–0.0014),/location/locationevent/soilsample/nitrogen_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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"Materia Orgánica (WSP S-9,10–%–0.1)",/location/locationevent/soilsample/organic_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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pH acuoso (ISRIC 4–– 1 - 14),/location/locationevent/soilsample/ph,
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Fósforo disponible (ISRIC 14-2–mg/Kg–1.5),/location/locationevent/soilsample/phosphorus_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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"Potasio intercambiable (WSP S-5,10–cmolc/Kg–0.0053)",/location/locationevent/soilsample/potassium_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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Arena (DIN 18 123–%–2.5),/location/locationevent/soilsample/sand_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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Limo (DIN 18 123–%–1),/location/locationevent/soilsample/silt_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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"Sodio intercambiable (WSP S-5,10–cmolc/Kg–0.00083)",/location/locationevent/soilsample/sodium_fraction/_percent_to_fraction/value,Assuming units are % based on the range of values
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Textural class,/location/locationevent/soilsample/texture,
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Inventory code,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
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Inventory name,"/location/locationevent/taxonoccurrence/authortaxoncode/_if[@name=""if in plot""]/cond/_exists",
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Locality,/location/locationnarrative/_merge/1,
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Latitude,"/location/locationplace/*_id/place/*_id/coordinates/latitude_deg/_nullIf:[null=0,type=float]/value",
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Longitude,"/location/locationplace/*_id/place/*_id/coordinates/longitude_deg/_nullIf:[null=0,type=float]/value",
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Latitude (DMS),/location/locationplace/*_id/place/*_id/coordinates/verbatimlatitude,
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Longitude (DMS),/location/locationplace/*_id/place/*_id/coordinates/verbatimlongitude,
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Latitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/latitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
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Longitude,"/location/locationplace/*_id/place/matched_place_id/place:[.,source_id/source/shortname=geoscrub]/*_id/coordinates:[source_id/source/shortname=geoscrub]/_first/2/longitude_deg/_nullIf:[null=0,type=float]/value",""".,"" sorts it with other coordinates mappings"
97 3968 aaronmk
Observaciones,/location/notespublic,
98 4799 aaronmk
Direction,/location/slopeaspect_deg/_alt/1/_compass/value/_alt/1,Part files provide either this field or Orientación
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Orientación/exposicion,/location/slopeaspect_deg/_alt/1/_compass/value/_alt/2,Part files provide either this field or Direction
100 4786 aaronmk
Slope,/location/slopegradient_fraction/_alt/1,
101 5773 aaronmk
Inventory code,"/location/sourceaccessioncode/_join/1/_if[@name=""if subplot and unique only within parent""]/then/_first/1",
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Inventory name,"/location/sourceaccessioncode/_join/1/_if[@name=""if subplot and unique only within parent""]/then/_first/2",
103 4807 aaronmk
Minimum altitude,/location/verbatimelevation,"This is a range [1], not a minimum. Assuming units are m based on the range of values [1] and the region the data is from (Madidi National Park) [2].
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[1] Using the following query:
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SELECT ""Minimum altitude"", ""Locality""
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FROM ""Madidi"".""Plot""
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WHERE ""Minimum altitude"" IS NOT NULL
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GROUP BY ""Minimum altitude"" , ""Locality""
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[2] This map shows both flat and mountainous regions: <https://maps.google.com/maps/ms?ie=UTF8&hl=en&t=h&msa=0&msid=103363035880599665829.00047e9cf84b87448387d&ll=-13.96448,-68.380065&spn=3.730927,4.669189&z=7>"
113 4979 aaronmk
Collaborators,,"** No join mapping for *Collaborators ** Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
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Coordinates,,** No join mapping for *Coordinates ** Concatenation of Latitude (DMS) and Longitude (DMS)
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Installed and evaluated by,,"** No join mapping for *Installed and evaluated by ** Need a way to store a verbatim list of people, or a function to parse it and insert it iteratively into party"
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Inventory number,,** No join mapping for *Inventory number ** Not globally unique
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Number of inventory (expedition),,** No join mapping for *Number of inventory (expedition) ** The number of the event within the project
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Number of stems,,** No join mapping for *Number of stems ** Do we want to store this data?
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Number of trees,,** No join mapping for *Number of trees ** Do we want to store this data?
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Related Epilocs,,"** No join mapping for *Related Epilocs ** It appears to be a list of people, some with #s after them. It doesn't seem like the definition of Epiloc at <http://rithm.wikispaces.com/Tropicos.Epiloc>, which relates to individual specimens, not whole plots."
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Soil sample,,** No join mapping for *Soil sample ** Always empty