| 1 |
541
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aaronmk
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CREATE TABLE location
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| 2 |
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(
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| 3 |
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location_id serial NOT NULL,
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| 4 |
582
|
aaronmk
|
authorlocationcode character varying(30),
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| 5 |
541
|
aaronmk
|
reference_id integer,
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| 6 |
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parent_id integer,
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| 7 |
582
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aaronmk
|
reallatitude double precision,
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| 8 |
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reallongitude double precision,
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| 9 |
541
|
aaronmk
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locationaccuracy double precision,
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| 10 |
575
|
aaronmk
|
confidentialitystatus integer NOT NULL DEFAULT 0,
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| 11 |
541
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aaronmk
|
confidentialityreason character varying(200),
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| 12 |
580
|
aaronmk
|
publiclatitude double precision,
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| 13 |
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publiclongitude double precision,
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| 14 |
561
|
aaronmk
|
"... (truncated) ..." integer,
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| 15 |
541
|
aaronmk
|
accessioncode character varying(255),
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| 16 |
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sublocationxposition double precision,
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| 17 |
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sublocationyposition double precision,
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| 18 |
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namedplace_id integer,
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| 19 |
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);
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| 20 |
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| 21 |
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CREATE TABLE locationevent -- VegBank's observation table.
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| 22 |
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(
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| 23 |
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locationevent_id serial NOT NULL,
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| 24 |
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previous_id integer,
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| 25 |
605
|
aaronmk
|
location_id integer,
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| 26 |
541
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aaronmk
|
project_id integer,
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| 27 |
570
|
aaronmk
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authoreventcode character varying(30),
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| 28 |
561
|
aaronmk
|
"... (truncated) ..." integer,
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| 29 |
541
|
aaronmk
|
accessioncode character varying(255),
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| 30 |
586
|
aaronmk
|
sourceaccessioncode character varying(100),
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| 31 |
541
|
aaronmk
|
);
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| 32 |
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| 33 |
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CREATE TABLE taxonoccurrence -- VegBank's taxonobservation table.
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| 34 |
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(
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| 35 |
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taxonoccurrence_id serial NOT NULL,
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| 36 |
605
|
aaronmk
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locationevent_id integer,
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| 37 |
541
|
aaronmk
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authorplantname character varying(255),
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| 38 |
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reference_id integer,
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| 39 |
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taxoninferencearea double precision,
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| 40 |
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emb_taxonoccurrence integer,
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| 41 |
561
|
aaronmk
|
"... (truncated) ..." integer,
|
| 42 |
541
|
aaronmk
|
accessioncode character varying(255),
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| 43 |
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);
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| 44 |
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| 45 |
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CREATE TABLE aggregateoccurrence -- VegBank's taxonimportance table.
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| 46 |
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(
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| 47 |
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aggregateoccurrence_id serial NOT NULL,
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| 48 |
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taxonoccurrence_id integer NOT NULL,
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| 49 |
584
|
aaronmk
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taxonbinmethod_id integer,
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| 50 |
541
|
aaronmk
|
cover double precision,
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| 51 |
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basalarea double precision,
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| 52 |
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biomass double precision,
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| 53 |
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inferencearea double precision,
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| 54 |
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stratumbase double precision,
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| 55 |
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stratumheight double precision,
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| 56 |
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emb_aggregateoccurrence integer,
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| 57 |
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covercode character varying(10),
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| 58 |
607
|
aaronmk
|
count integer,
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| 59 |
541
|
aaronmk
|
accessioncode character varying(255),
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| 60 |
586
|
aaronmk
|
sourceaccessioncode character varying(100),
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| 61 |
671
|
aaronmk
|
plantobservation_id integer,
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| 62 |
541
|
aaronmk
|
);
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| 63 |
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| 64 |
674
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aaronmk
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CREATE TABLE plant -- A physical, tagged plant.
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| 65 |
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(
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| 66 |
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plant_id serial NOT NULL,
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| 67 |
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);
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| 68 |
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| 69 |
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CREATE TABLE planttag
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| 70 |
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(
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| 71 |
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planttag_id serial NOT NULL,
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| 72 |
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plant_id integer NOT NULL,
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| 73 |
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tag character varying(255) NOT NULL,
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| 74 |
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);
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| 75 |
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| 76 |
671
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aaronmk
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CREATE TABLE plantobservation -- VegBank's stemcount table.
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| 77 |
541
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aaronmk
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(
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| 78 |
671
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aaronmk
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plantobservation_id serial NOT NULL,
|
| 79 |
541
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aaronmk
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aggregateoccurrence_id integer NOT NULL,
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| 80 |
563
|
aaronmk
|
overallheight double precision,
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| 81 |
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overallheightaccuracy double precision,
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| 82 |
671
|
aaronmk
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emb_plantobservation integer,
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| 83 |
570
|
aaronmk
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authorplantcode character varying(20),
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| 84 |
541
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aaronmk
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accessioncode character varying(255),
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| 85 |
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stemcount integer,
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| 86 |
586
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aaronmk
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sourceaccessioncode character varying(100),
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| 87 |
674
|
aaronmk
|
plant_id integer,
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| 88 |
541
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aaronmk
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);
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| 89 |
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| 90 |
673
|
aaronmk
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CREATE TABLE stemobservation -- VegBank's stemlocation table.
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| 91 |
541
|
aaronmk
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(
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| 92 |
673
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aaronmk
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stemobservation_id serial NOT NULL,
|
| 93 |
671
|
aaronmk
|
plantobservation_id integer NOT NULL,
|
| 94 |
570
|
aaronmk
|
authorstemcode character varying(20),
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| 95 |
541
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aaronmk
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xposition double precision,
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| 96 |
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yposition double precision,
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| 97 |
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health character varying(50),
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| 98 |
673
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aaronmk
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emb_stemobservation integer,
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| 99 |
541
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aaronmk
|
diameter double precision,
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| 100 |
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height double precision,
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| 101 |
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heightaccuracy double precision,
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| 102 |
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age double precision,
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| 103 |
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accessioncode character varying(255),
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| 104 |
556
|
aaronmk
|
diameteraccuracy double precision,
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| 105 |
586
|
aaronmk
|
sourceaccessioncode character varying(100),
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| 106 |
541
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aaronmk
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);
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| 107 |
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| 108 |
670
|
aaronmk
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CREATE TABLE specimen -- A physical specimen collected from a plant. Used to link replicates of the same specimen together.
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| 109 |
669
|
aaronmk
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(
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| 110 |
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specimen_id serial NOT NULL,
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| 111 |
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);
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| 112 |
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| 113 |
670
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aaronmk
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CREATE TABLE specimenreplicate -- A herbarium's replicate of a specimen. Contains Darwin Core specimen data.
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| 114 |
541
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aaronmk
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(
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| 115 |
668
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aaronmk
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specimenreplicate_id serial NOT NULL,
|
| 116 |
541
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aaronmk
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reference_id integer NOT NULL,
|
| 117 |
668
|
aaronmk
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collectioncode_dwc character varying(255), -- The code for the collection that the specimenreplicate is from.
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| 118 |
541
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aaronmk
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catalognumber_dwc character varying(255),
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| 119 |
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collectiondate timestamp with time zone,
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| 120 |
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museum_id integer,
|
| 121 |
586
|
aaronmk
|
sourceaccessioncode character varying(100),
|
| 122 |
541
|
aaronmk
|
accessioncode character varying(255),
|
| 123 |
576
|
aaronmk
|
taxonoccurrence_id integer NOT NULL,
|
| 124 |
613
|
aaronmk
|
verbatimcollectorname character varying(255),
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| 125 |
668
|
aaronmk
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collectionnumber character varying(255), -- The number of the specimenreplicate within the collection.
|
| 126 |
669
|
aaronmk
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specimen_id integer,
|
| 127 |
541
|
aaronmk
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);
|
| 128 |
|
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| 129 |
544
|
aaronmk
|
CREATE TABLE voucher
|
| 130 |
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(
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| 131 |
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voucher_id serial NOT NULL,
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| 132 |
545
|
aaronmk
|
taxonoccurrence_id integer NOT NULL,
|
| 133 |
668
|
aaronmk
|
specimenreplicate_id integer NOT NULL,
|
| 134 |
544
|
aaronmk
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accessioncode character varying(255),
|
| 135 |
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);
|
| 136 |
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| 137 |
541
|
aaronmk
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CREATE TABLE taxondetermination -- VegBank's taxoninterpretation table.
|
| 138 |
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(
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| 139 |
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taxondetermination_id serial NOT NULL,
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| 140 |
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taxonoccurrence_id integer NOT NULL,
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| 141 |
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plantconcept_id integer NOT NULL,
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| 142 |
575
|
aaronmk
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party_id integer,
|
| 143 |
541
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aaronmk
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role_id integer NOT NULL,
|
| 144 |
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determinationtype character varying(30),
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| 145 |
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reference_id integer,
|
| 146 |
632
|
aaronmk
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isoriginal boolean NOT NULL DEFAULT false,
|
| 147 |
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iscurrent boolean NOT NULL DEFAULT false,
|
| 148 |
541
|
aaronmk
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taxonfit character varying(50),
|
| 149 |
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taxonconfidence character varying(50),
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| 150 |
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grouptype character varying(20),
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| 151 |
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notes text,
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| 152 |
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notespublic boolean,
|
| 153 |
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notesmgt boolean,
|
| 154 |
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revisions boolean,
|
| 155 |
591
|
aaronmk
|
determinationdate timestamp with time zone,
|
| 156 |
541
|
aaronmk
|
emb_taxondetermination integer,
|
| 157 |
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accessioncode character varying(255),
|
| 158 |
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);
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| 159 |
|
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| 160 |
552
|
aaronmk
|
CREATE TABLE stratum
|
| 161 |
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(
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| 162 |
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stratum_id serial NOT NULL,
|
| 163 |
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locationevent_id integer NOT NULL,
|
| 164 |
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stratumtype_id integer NOT NULL,
|
| 165 |
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stratummethod_id integer,
|
| 166 |
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stratumname character varying(30),
|
| 167 |
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stratumheight double precision,
|
| 168 |
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stratumbase double precision,
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| 169 |
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stratumcover double precision,
|
| 170 |
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stratumdescription character varying(200),
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| 171 |
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);
|
| 172 |
|
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|
| 173 |
541
|
aaronmk
|
CREATE TABLE sizeclass -- A range of size measurements used to aggregate organisms.
|
| 174 |
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(
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| 175 |
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sizeclass_id serial NOT NULL,
|
| 176 |
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mindiameter double precision,
|
| 177 |
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minheight double precision,
|
| 178 |
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maxdiameter double precision,
|
| 179 |
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maxheight double precision,
|
| 180 |
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accessioncode character varying(255),
|
| 181 |
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);
|
| 182 |
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|
| 183 |
592
|
aaronmk
|
CREATE TABLE taxonbinmethod
|
| 184 |
541
|
aaronmk
|
(
|
| 185 |
584
|
aaronmk
|
taxonbinmethod_id integer NOT NULL,
|
| 186 |
592
|
aaronmk
|
label character varying(255),
|
| 187 |
|
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stratumtype_id integer,
|
| 188 |
541
|
aaronmk
|
sizeclass_id integer,
|
| 189 |
|
|
coverindex_id integer,
|
| 190 |
|
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accessioncode character varying(255),
|
| 191 |
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);
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