Project

General

Profile

« Previous | Next » 

Revision 6816

Added by Aaron Marcuse-Kubitza about 12 years ago

inputs/CVS/cvs.~.utils.sql: plantconcept_plantnames(): Use CVS's taxonLevel values, which are different from the VegBank plantLevel values that the original version of this function used

View differences:

inputs/CVS/plantConcept_/header.csv
1 
PLANTCONCEPT_ID,PLANTNAME_ID,plantConcept_reference_ID,plantname,plantNameWithAuthority,plantCode,plantDescription,plantConcept_accessionCode,plantConcept_dba_src_ID,plantConcept_entry_sppID,USDAPlantsCode,VascularPlant,denorm_kingdom,denorm_division,denorm_category,denorm_family,denorm_genus,denorm_species,denorm_triAbbr,denorm_triName,denorm_quadAbbr,denorm_quadName,denorm_hybridX,taxonLevel,taxonRank,lowestParentName,lowestParentConcept_ID,lowestChildRank,commonName,growthForm_short,woody,exotic,usda_code,usda_growthForm,Kingdom,Subkingdom,Superdivision,Division,Subdivision,Class,Subclass,Order,Family,Genus,Species,Subspecies,Variety,Forma
1 
PLANTCONCEPT_ID,PLANTNAME_ID,plantConcept_reference_ID,plantname,plantNameWithAuthority,plantCode,plantDescription,plantConcept_accessionCode,plantConcept_dba_src_ID,plantConcept_entry_sppID,USDAPlantsCode,VascularPlant,denorm_kingdom,denorm_division,denorm_category,denorm_family,denorm_genus,denorm_species,denorm_triAbbr,denorm_triName,denorm_quadAbbr,denorm_quadName,denorm_hybridX,taxonLevel,taxonRank,lowestParentName,lowestParentConcept_ID,lowestChildRank,commonName,growthForm_short,woody,exotic,usda_code,usda_growthForm,Kingdom,Subkingdom,Division,Class,Subclass,Order,composite family,family,tribe,composite genus,genus,subgenus,section,composite species,species,subspecies,composite variety,variety
inputs/CVS/cvs.~.utils.sql
35 35 

  		




  36
  36
  
    
-- DROP FUNCTION plantconcept_plantnames(integer);


  		




  37
  37
  
    

  		




  38
  
  
    
CREATE OR REPLACE FUNCTION plantconcept_plantnames(IN "PLANTCONCEPT_ID" integer, OUT "Kingdom" text, OUT "Subkingdom" text, OUT "Superdivision" text, OUT "Division" text, OUT "Subdivision" text, OUT "Class" text, OUT "Subclass" text, OUT "Order" text, OUT "Family" text, OUT "Genus" text, OUT "Species" text, OUT "Subspecies" text, OUT "Variety" text, OUT "Forma" text)


  		




  
  38
  
    
CREATE OR REPLACE FUNCTION plantconcept_plantnames(IN "PLANTCONCEPT_ID" integer, OUT "Kingdom" text, OUT "Subkingdom" text, OUT "Division" text, OUT "Class" text, OUT "Subclass" text, OUT "Order" text, OUT "composite family" text, OUT "family" text, OUT "tribe" text, OUT "composite genus" text, OUT "genus" text, OUT "subgenus" text, OUT "section" text, OUT "composite species" text, OUT "species" text, OUT "subspecies" text, OUT "composite variety" text, OUT "variety" text)


  		




  39
  39
  
    
  RETURNS record AS


  		




  40
  40
  
    
$BODY$


  		




  41
  41
  
    
WITH "level_plantName" AS (


  		




  ......




  47
  47
  
    
SELECT


  		




  48
  48
  
    
  (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Kingdom')


  		




  49
  49
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Subkingdom')


  		




  50
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Superdivision')


  		




  51
  50
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Division')


  		




  52
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Subdivision')


  		




  53
  51
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Class')


  		




  54
  52
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Subclass')


  		




  55
  53
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Order')


  		




  56
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Family')


  		




  57
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Genus')


  		




  58
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Species')


  		




  59
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Subspecies')


  		




  60
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Variety')


  		




  61
  
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'Forma')


  		




  
  54
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'composite family')


  		




  
  55
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'family')


  		




  
  56
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'tribe')


  		




  
  57
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'composite genus')


  		




  
  58
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'genus')


  		




  
  59
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'subgenus')


  		




  
  60
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'section')


  		




  
  61
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'composite species')


  		




  
  62
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'species')


  		




  
  63
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'subspecies')


  		




  
  64
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'composite variety')


  		




  
  65
  
    
, (SELECT "plantName" FROM "level_plantName" WHERE "taxonLevel" = 'variety')


  		




  62
  66
  
    
$BODY$


  		




  63
  67
  
    
  LANGUAGE sql STABLE STRICT


  		




  64
  68
  
    
  COST 100;


  		












  

    
      inputs/CVS/taxonObservation_/header.csv
    
  





  1
  
  
    
PLANTCONCEPT_ID,TAXONOBSERVATION_ID,OBSERVATION_ID,authorPlantName,taxonObservation_reference_ID,currentTaxonInterpPlantConcept_ID,taxonInferenceArea,taxonObservation_accessionCode,taxonObservation_dba_src_ID,cust_cvs_corner1Presence,cust_cvs_corner2Presence,cust_cvs_corner3Presence,cust_cvs_corner4Presence,cust_cvs_corner5Presence,entry_herbLineID,entry_treeLineID,taxonObservation_entry_sppID,entry_unknownSp,entry_sortOrder,cust_cvs_collectionFlag,taxonObservationNotes,temp_taxonUpToDate,TAXONINTERPRETATION_ID,stemLocation_ID,interpretationDate,taxonInterpretation_PLANTNAME_ID,taxonInterpretation_PARTY_ID,ROLE_ID,interpretationType,reference_ID,originalInterpretation,currentInterpretation,taxonFit,taxonConfidence,collector_ID,collectionNumber,collectionDate,museum_ID,museumAccessionNumber,groupType,notes,notesPublic,notesMgt,revisions,taxonInterpretation_dba_src_ID,taxonInterpretation_accessionCode,PARTY_ID,salutation,givenName,middleName,surName,suffix,entry_userInitials,organizationName,currentName_ID,contactInstructions,email,accessionCode,partyType,dba_src_ID,dba_unsure,PLANTNAME_ID,plantConcept_reference_ID,plantname,plantNameWithAuthority,plantCode,plantDescription,plantConcept_accessionCode,plantConcept_dba_src_ID,plantConcept_entry_sppID,USDAPlantsCode,VascularPlant,denorm_kingdom,denorm_division,denorm_category,denorm_family,denorm_genus,denorm_species,denorm_triAbbr,denorm_triName,denorm_quadAbbr,denorm_quadName,denorm_hybridX,taxonLevel,taxonRank,lowestParentName,lowestParentConcept_ID,lowestChildRank,commonName,growthForm_short,woody,exotic,usda_code,usda_growthForm,Kingdom,Subkingdom,Superdivision,Division,Subdivision,Class,Subclass,Order,Family,Genus,Species,Subspecies,Variety,Forma


  		




  
  1
  
    
PLANTCONCEPT_ID,TAXONOBSERVATION_ID,OBSERVATION_ID,authorPlantName,taxonObservation_reference_ID,currentTaxonInterpPlantConcept_ID,taxonInferenceArea,taxonObservation_accessionCode,taxonObservation_dba_src_ID,cust_cvs_corner1Presence,cust_cvs_corner2Presence,cust_cvs_corner3Presence,cust_cvs_corner4Presence,cust_cvs_corner5Presence,entry_herbLineID,entry_treeLineID,taxonObservation_entry_sppID,entry_unknownSp,entry_sortOrder,cust_cvs_collectionFlag,taxonObservationNotes,temp_taxonUpToDate,TAXONINTERPRETATION_ID,stemLocation_ID,interpretationDate,taxonInterpretation_PLANTNAME_ID,taxonInterpretation_PARTY_ID,ROLE_ID,interpretationType,reference_ID,originalInterpretation,currentInterpretation,taxonFit,taxonConfidence,collector_ID,collectionNumber,collectionDate,museum_ID,museumAccessionNumber,groupType,notes,notesPublic,notesMgt,revisions,taxonInterpretation_dba_src_ID,taxonInterpretation_accessionCode,PARTY_ID,salutation,givenName,middleName,surName,suffix,entry_userInitials,organizationName,currentName_ID,contactInstructions,email,accessionCode,partyType,dba_src_ID,dba_unsure,PLANTNAME_ID,plantConcept_reference_ID,plantname,plantNameWithAuthority,plantCode,plantDescription,plantConcept_accessionCode,plantConcept_dba_src_ID,plantConcept_entry_sppID,USDAPlantsCode,VascularPlant,denorm_kingdom,denorm_division,denorm_category,denorm_family,denorm_genus,denorm_species,denorm_triAbbr,denorm_triName,denorm_quadAbbr,denorm_quadName,denorm_hybridX,taxonLevel,taxonRank,lowestParentName,lowestParentConcept_ID,lowestChildRank,commonName,growthForm_short,woody,exotic,usda_code,usda_growthForm,Kingdom,Subkingdom,Division,Class,Subclass,Order,composite family,family,tribe,composite genus,genus,subgenus,section,composite species,species,subspecies,composite variety,variety


  		












  

    
      inputs/CVS/taxonObservation_/map.csv
    
  





  95
  95
  
    
usda_growthForm,*usda_growthForm,,


  		




  96
  96
  
    
Kingdom,kingdom,/_alt/2,


  		




  97
  97
  
    
Subkingdom,*Subkingdom,/_alt/2,


  		




  98
  
  
    
Superdivision,*Superdivision,/_alt/2,


  		




  99
  98
  
    
Division,*Division,/_alt/2,


  		




  100
  
  
    
Subdivision,*Subdivision,/_alt/2,


  		




  101
  99
  
    
Class,class,/_alt/2,


  		




  102
  100
  
    
Subclass,*Subclass,/_alt/2,


  		




  103
  101
  
    
Order,order,/_alt/2,


  		




  104
  
  
    
Family,family,/_alt/2,


  		




  105
  
  
    
Genus,genus,/_alt/2,


  		




  106
  
  
    
Species,specificEpithet,/_alt/2,


  		




  107
  
  
    
Subspecies,subspecies,/_alt/2,


  		




  108
  
  
    
Variety,variety,/_alt/2,


  		




  109
  
  
    
Forma,forma,/_alt/2,


  		




  
  102
  
    
composite family,*composite family,/_alt/2,


  		




  
  103
  
    
family,family,/_alt/2,


  		




  
  104
  
    
tribe,*tribe,/_alt/2,


  		




  
  105
  
    
composite genus,*composite genus,/_alt/2,


  		




  
  106
  
    
genus,genus,/_alt/2,


  		




  
  107
  
    
subgenus,subgenus,/_alt/2,


  		




  
  108
  
    
section,*section,/_alt/2,


  		




  
  109
  
    
composite species,*composite species,/_alt/2,


  		




  
  110
  
    
species,specificEpithet,/_alt/2,


  		




  
  111
  
    
subspecies,subspecies,/_alt/2,


  		




  
  112
  
    
composite variety,*composite variety,/_alt/2,


  		




  
  113
  
    
variety,variety,,


  		




  110
  114
  
    
:plot,observationType,,


  		












  

    
      inputs/CVS/taxonObservation_/VegBIEN.csv
    
  





  21
  21
  
    
TAXONOBSERVATION_ID,"/location/locationevent/taxonoccurrence/iscultivated/_alt/1/_if[@name=""if TaxonOccurrence""]/cond/_exists",


  		




  22
  22
  
    
TAXONOBSERVATION_ID,/location/locationevent/taxonoccurrence/sourceaccessioncode/_first/1,


  		




  23
  23
  
    
denorm_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/1",


  		




  24
  
  
    
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/2",


  		




  
  24
  
    
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/2",


  		




  25
  25
  
    
denorm_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/1",


  		




  26
  
  
    
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/2",


  		




  
  26
  
    
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/2",


  		




  27
  27
  
    
denorm_species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/1",


  		




  28
  
  
    
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/2",


  		




  29
  
  
    
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/4/_alt/2",


  		




  
  28
  
    
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/2",


  		




  
  29
  
    
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/4/_alt/2",


  		




  30
  30
  
    
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",


  		




  31
  
  
    
Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""var. ""]/2/_alt/2",


  		




  32
  
  
    
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/8/_join_words:[1=""fm. ""]/2/_alt/2",


  		




  
  31
  
    
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/_if[@name=""if has verbatim name""]/else/matched_label_id/taxonlabel:[source_id/source/shortname=TNRS]/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""var. ""]/2",


  		




  33
  32
  
    
interpretationDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/creationdate/_alt/1/_dateRangeStart/value,


  		




  34
  33
  
    
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/rank",


  		




  35
  34
  
    
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/_if[@name=""if has explicit parent""]/else/taxonverbatim/verbatimrank",


  		




  36
  
  
    
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=forma]/taxonepithet/_alt/2",


  		




  37
  
  
    
Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet/_alt/2",


  		




  38
  
  
    
Subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet/_alt/2",


  		




  
  35
  
    
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=variety]/taxonepithet",


  		




  
  36
  
    
subspecies,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=subspecies]/taxonepithet/_alt/2",


  		




  39
  37
  
    
denorm_species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet/_alt/1",


  		




  40
  
  
    
Species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet/_alt/2",


  		




  
  38
  
    
species,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=species]/taxonepithet/_alt/2",


  		




  41
  39
  
    
denorm_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/1",


  		




  42
  
  
    
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",


  		




  
  40
  
    
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",


  		




  43
  41
  
    
denorm_genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/1",


  		




  44
  
  
    
Genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/2",


  		




  
  42
  
    
genus,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=genus]/taxonepithet/_alt/2",


  		




  45
  43
  
    
denorm_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/1",


  		




  46
  
  
    
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",


  		




  
  44
  
    
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/_if[@name=""if is canonical name""]/then/matched_label_id/taxonlabel:[source_id/source/shortname=NCBI]/taxonomicname/_alt/2",


  		




  47
  45
  
    
denorm_family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_alt/1",


  		




  48
  
  
    
Family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_alt/2",


  		




  
  46
  
    
family,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=family]/taxonepithet/_alt/2",


  		




  49
  47
  
    
Order,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=order]/taxonepithet/_alt/2",


  		




  50
  48
  
    
Class,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=class]/taxonepithet/_alt/2",


  		




  51
  49
  
    
denorm_kingdom,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/parent_id/taxonlabel/parent_id/_forEach:[in:[cultivar,forma,variety,subspecies,species,genus,family,order,class,phylum,],do=""taxonlabel[rank=_val]/parent_id""]/taxonlabel[rank=kingdom]/taxonepithet/_alt/1",


  		




  ......




  53
  51
  
    
taxonLevel,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/rank,


  		




  54
  52
  
    
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonepithet/_if[@name=""if taxonomic name is epithet""]/cond/_alt:[2=true]/1/_taxonomic_name_is_epithet/rank",


  		




  55
  53
  
    
denorm_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/1,


  		




  56
  
  
    
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/2,


  		




  
  54
  
    
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/1/_taxon_family_require_std/family/_nullIf/value/_alt/2,


  		




  57
  55
  
    
denorm_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/1,


  		




  58
  
  
    
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/2,


  		




  
  56
  
    
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/2/_alt/2,


  		




  59
  57
  
    
denorm_species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/1,


  		




  60
  
  
    
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/2,


  		




  61
  
  
    
Subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/4/_alt/2,


  		




  
  58
  
    
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/3/_join_words/1/_alt/2,


  		




  
  59
  
    
subspecies,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/4/_alt/2,


  		




  62
  60
  
    
taxonLevel,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/5/_join_words/1/_if[@name=""if has infraspecificEpithet""]/then",


  		




  63
  
  
    
Variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2/_alt/2",


  		




  64
  
  
    
Forma,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/7/_join_words:[1=""fm. ""]/2/_alt/2",


  		




  
  61
  
    
variety,"/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/*_id/taxonlabel/taxonomicname/_join_words/2/_alt/2/_join_words/1/_alt/2/_join_words/6/_join_words:[1=""var. ""]/2",


  		




  65
  62
  
    
denorm_family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_alt/1,


  		




  66
  
  
    
Family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_alt/2,


  		




  
  63
  
    
family,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/family/_alt/2,


  		




  67
  64
  
    
denorm_genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus/_alt/1,


  		




  68
  
  
    
Genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus/_alt/2,


  		




  
  65
  
    
genus,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/genus/_alt/2,


  		




  69
  66
  
    
denorm_species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet/_alt/1,


  		




  70
  
  
    
Species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet/_alt/2,


  		




  
  67
  
    
species,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/specific_epithet/_alt/2,


  		




  71
  68
  
    
taxonLevel,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/*_id/taxonverbatim/verbatimrank,


  		




  72
  69
  
    
interpretationDate,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/determinationdate/_alt/1/_dateRangeStart/value,


  		




  73
  70
  
    
taxonFit,/location/locationevent/taxonoccurrence/taxondetermination[!isoriginal]/taxonfit,


  		




  ......




  83
  80
  
    
PLANTNAME_ID,,** No join mapping for *PLANTNAME_ID ** 


  		




  84
  81
  
    
ROLE_ID,,** No join mapping for *ROLE_ID ** 


  		




  85
  82
  
    
Subclass,,** No join mapping for *Subclass/_alt/2 ** 


  		




  86
  
  
    
Subdivision,,** No join mapping for *Subdivision/_alt/2 ** 


  		




  87
  83
  
    
Subkingdom,,** No join mapping for *Subkingdom/_alt/2 ** 


  		




  88
  
  
    
Superdivision,,** No join mapping for *Superdivision/_alt/2 ** 


  		




  89
  84
  
    
TAXONINTERPRETATION_ID,,** No join mapping for *TAXONINTERPRETATION_ID ** 


  		




  90
  85
  
    
USDAPlantsCode,,** No join mapping for *USDAPlantsCode ** 


  		




  91
  86
  
    
VascularPlant,,** No join mapping for *VascularPlant ** 


  		




  ......




  93
  88
  
    
collectionNumber,,** No join mapping for *collectionNumber ** 


  		




  94
  89
  
    
collector_ID,,** No join mapping for *collector_ID ** 


  		




  95
  90
  
    
commonName,,** No join mapping for *commonName ** 


  		




  
  91
  
    
composite family,,** No join mapping for *composite family/_alt/2 ** 


  		




  
  92
  
    
composite genus,,** No join mapping for *composite genus/_alt/2 ** 


  		




  
  93
  
    
composite species,,** No join mapping for *composite species/_alt/2 ** 


  		




  
  94
  
    
composite variety,,** No join mapping for *composite variety/_alt/2 ** 


  		




  96
  95
  
    
contactInstructions,,** No join mapping for *contactInstructions ** 


  		




  97
  96
  
    
currentInterpretation,,** No join mapping for *currentInterpretation ** 


  		




  98
  97
  
    
currentName_ID,,** No join mapping for *currentName_ID ** 


  		




  ......




  143
  142
  
    
reference_ID,,** No join mapping for *reference_ID ** 


  		




  144
  143
  
    
revisions,,** No join mapping for *revisions ** 


  		




  145
  144
  
    
salutation,,** No join mapping for *salutation ** 


  		




  
  145
  
    
section,,** No join mapping for *section/_alt/2 ** 


  		




  
  146
  
    
subgenus,,** No join mapping for subgenus/_alt/2 ** 


  		




  146
  147
  
    
suffix,,** No join mapping for *suffix ** 


  		




  147
  148
  
    
taxonConfidence,,** No join mapping for *taxonConfidence ** 


  		




  148
  149
  
    
taxonInferenceArea,,** No join mapping for *taxonInferenceArea ** 


  		




  ......




  157
  158
  
    
taxonObservation_reference_ID,,** No join mapping for *taxonObservation_reference_ID ** 


  		




  158
  159
  
    
taxonRank,,** No non-empty join mapping for OMIT ** Omitted because taxonLevel contains this information in text form


  		




  159
  160
  
    
temp_taxonUpToDate,,** No join mapping for *temp_taxonUpToDate ** 


  		




  
  161
  
    
tribe,,** No join mapping for *tribe/_alt/2 ** 


  		




  160
  162
  
    
usda_code,,** No join mapping for *usda_code ** 


  		




  161
  163
  
    
usda_growthForm,,** No join mapping for *usda_growthForm ** 


  		




  162
  164
  
    
woody,,** No join mapping for *woody ** 


  		












  

    
      inputs/CVS/taxonObservation_/test.xml.ref
    
  





  45
  45
  
    
                                                                            <family>


  		




  46
  46
  
    
                                                                                <_alt>


  		




  47
  47
  
    
                                                                                    <1>$denorm_family</1>


  		




  48
  
  
    
                                                                                    <2>$Family</2>


  		




  
  48
  
    
                                                                                    <2>$family</2>


  		




  49
  49
  
    
                                                                                </_alt>


  		




  50
  50
  
    
                                                                            </family>


  		




  51
  51
  
    
                                                                        </_taxon_family_require_std>


  		




  ......




  55
  55
  
    
                                                                            <2>


  		




  56
  56
  
    
                                                                                <_alt>


  		




  57
  57
  
    
                                                                                    <1>$denorm_genus</1>


  		




  58
  
  
    
                                                                                    <2>$Genus</2>


  		




  
  58
  
    
                                                                                    <2>$genus</2>


  		




  59
  59
  
    
                                                                                </_alt>


  		




  60
  60
  
    
                                                                            </2>


  		




  61
  61
  
    
                                                                            <3>


  		




  62
  62
  
    
                                                                                <_alt>


  		




  63
  63
  
    
                                                                                    <1>$denorm_species</1>


  		




  64
  
  
    
                                                                                    <2>$Species</2>


  		




  
  64
  
    
                                                                                    <2>$species</2>


  		




  65
  65
  
    
                                                                                </_alt>


  		




  66
  66
  
    
                                                                            </3>


  		




  67
  
  
    
                                                                            <4>$Subspecies</4>


  		




  
  67
  
    
                                                                            <4>$subspecies</4>


  		




  68
  68
  
    
                                                                            <7>


  		




  69
  69
  
    
                                                                                <_join_words>


  		




  70
  70
  
    
                                                                                    <1>var. </1>


  		




  71
  
  
    
                                                                                    <2>$Variety</2>


  		




  
  71
  
    
                                                                                    <2>$variety</2>


  		




  72
  72
  
    
                                                                                </_join_words>


  		




  73
  73
  
    
                                                                            </7>


  		




  74
  
  
    
                                                                            <8>


  		




  75
  
  
    
                                                                                <_join_words>


  		




  76
  
  
    
                                                                                    <1>fm. </1>


  		




  77
  
  
    
                                                                                    <2>$Forma</2>


  		




  78
  
  
    
                                                                                </_join_words>


  		




  79
  
  
    
                                                                            </8>


  		




  80
  74
  
    
                                                                        </_join_words>


  		




  81
  75
  
    
                                                                    </2>


  		




  82
  76
  
    
                                                                </_join_words>


  		




  ......




  94
  88
  
    
                                                                    <parent_id>


  		




  95
  89
  
    
                                                                        <taxonlabel>


  		




  96
  90
  
    
                                                                            <rank>forma</rank>


  		




  97
  
  
    
                                                                            <taxonepithet>$Forma</taxonepithet>


  		




  98
  91
  
    
                                                                            <parent_id>


  		




  99
  92
  
    
                                                                                <taxonlabel>


  		




  100
  93
  
    
                                                                                    <rank>variety</rank>


  		




  101
  
  
    
                                                                                    <taxonepithet>$Variety</taxonepithet>


  		




  
  94
  
    
                                                                                    <taxonepithet>$variety</taxonepithet>


  		




  102
  95
  
    
                                                                                    <parent_id>


  		




  103
  96
  
    
                                                                                        <taxonlabel>


  		




  104
  97
  
    
                                                                                            <rank>subspecies</rank>


  		




  105
  
  
    
                                                                                            <taxonepithet>$Subspecies</taxonepithet>


  		




  
  98
  
    
                                                                                            <taxonepithet>$subspecies</taxonepithet>


  		




  106
  99
  
    
                                                                                            <parent_id>


  		




  107
  100
  
    
                                                                                                <taxonlabel>


  		




  108
  101
  
    
                                                                                                    <rank>species</rank>


  		




  109
  102
  
    
                                                                                                    <taxonepithet>


  		




  110
  103
  
    
                                                                                                        <_alt>


  		




  111
  104
  
    
                                                                                                            <1>$denorm_species</1>


  		




  112
  
  
    
                                                                                                            <2>$Species</2>


  		




  
  105
  
    
                                                                                                            <2>$species</2>


  		




  113
  106
  
    
                                                                                                        </_alt>


  		




  114
  107
  
    
                                                                                                    </taxonepithet>


  		




  115
  108
  
    
                                                                                                    <parent_id>


  		




  ......




  118
  111
  
    
                                                                                                            <taxonepithet>


  		




  119
  112
  
    
                                                                                                                <_alt>


  		




  120
  113
  
    
                                                                                                                    <1>$denorm_genus</1>


  		




  121
  
  
    
                                                                                                                    <2>$Genus</2>


  		




  
  114
  
    
                                                                                                                    <2>$genus</2>


  		




  122
  115
  
    
                                                                                                                </_alt>


  		




  123
  116
  
    
                                                                                                            </taxonepithet>


  		




  124
  117
  
    
                                                                                                            <parent_id>


  		




  ......




  127
  120
  
    
                                                                                                                    <taxonepithet>


  		




  128
  121
  
    
                                                                                                                        <_alt>


  		




  129
  122
  
    
                                                                                                                            <1>$denorm_family</1>


  		




  130
  
  
    
                                                                                                                            <2>$Family</2>


  		




  
  123
  
    
                                                                                                                            <2>$family</2>


  		




  131
  124
  
    
                                                                                                                        </_alt>


  		




  132
  125
  
    
                                                                                                                    </taxonepithet>


  		




  133
  126
  
    
                                                                                                                    <parent_id>


  		




  ......




  182
  175
  
    
                                                                    <family>


  		




  183
  176
  
    
                                                                        <_alt>


  		




  184
  177
  
    
                                                                            <1>$denorm_family</1>


  		




  185
  
  
    
                                                                            <2>$Family</2>


  		




  
  178
  
    
                                                                            <2>$family</2>


  		




  186
  179
  
    
                                                                        </_alt>


  		




  187
  180
  
    
                                                                    </family>


  		




  188
  181
  
    
                                                                </_taxon_family_require_std>


  		




  ......




  192
  185
  
    
                                                                    <2>


  		




  193
  186
  
    
                                                                        <_alt>


  		




  194
  187
  
    
                                                                            <1>$denorm_genus</1>


  		




  195
  
  
    
                                                                            <2>$Genus</2>


  		




  
  188
  
    
                                                                            <2>$genus</2>


  		




  196
  189
  
    
                                                                        </_alt>


  		




  197
  190
  
    
                                                                    </2>


  		




  198
  191
  
    
                                                                    <3>


  		




  199
  192
  
    
                                                                        <_alt>


  		




  200
  193
  
    
                                                                            <1>$denorm_species</1>


  		




  201
  
  
    
                                                                            <2>$Species</2>


  		




  
  194
  
    
                                                                            <2>$species</2>


  		




  202
  195
  
    
                                                                        </_alt>


  		




  203
  196
  
    
                                                                    </3>


  		




  204
  
  
    
                                                                    <4>$Subspecies</4>


  		




  
  197
  
    
                                                                    <4>$subspecies</4>


  		




  205
  198
  
    
                                                                    <6>


  		




  206
  199
  
    
                                                                        <_join_words>


  		




  207
  200
  
    
                                                                            <1>var. </1>


  		




  208
  
  
    
                                                                            <2>$Variety</2>


  		




  
  201
  
    
                                                                            <2>$variety</2>


  		




  209
  202
  
    
                                                                        </_join_words>


  		




  210
  203
  
    
                                                                    </6>


  		




  211
  
  
    
                                                                    <7>


  		




  212
  
  
    
                                                                        <_join_words>


  		




  213
  
  
    
                                                                            <1>fm. </1>


  		




  214
  
  
    
                                                                            <2>$Forma</2>


  		




  215
  
  
    
                                                                        </_join_words>


  		




  216
  
  
    
                                                                    </7>


  		




  217
  204
  
    
                                                                </_join_words>


  		




  218
  205
  
    
                                                            </2>


  		




  219
  206
  
    
                                                        </_join_words>


  		




  ......




  223
  210
  
    
                                            <family>


  		




  224
  211
  
    
                                                <_alt>


  		




  225
  212
  
    
                                                    <1>$denorm_family</1>


  		




  226
  
  
    
                                                    <2>$Family</2>


  		




  
  213
  
    
                                                    <2>$family</2>


  		




  227
  214
  
    
                                                </_alt>


  		




  228
  215
  
    
                                            </family>


  		




  229
  216
  
    
                                            <genus>


  		




  230
  217
  
    
                                                <_alt>


  		




  231
  218
  
    
                                                    <1>$denorm_genus</1>


  		




  232
  
  
    
                                                    <2>$Genus</2>


  		




  
  219
  
    
                                                    <2>$genus</2>


  		




  233
  220
  
    
                                                </_alt>


  		




  234
  221
  
    
                                            </genus>


  		




  235
  222
  
    
                                            <specific_epithet>


  		




  236
  223
  
    
                                                <_alt>


  		




  237
  224
  
    
                                                    <1>$denorm_species</1>


  		




  238
  
  
    
                                                    <2>$Species</2>


  		




  
  225
  
    
                                                    <2>$species</2>


  		




  239
  226
  
    
                                                </_alt>


  		




  240
  227
  
    
                                            </specific_epithet>


  		




  241
  228
  
    
                                            <verbatimrank>$taxonLevel</verbatimrank>


  		




  ......




  271
  258
  
    
        </path>


  		




  272
  259
  
    
    </_setDefault>


  		




  273
  260
  
    
</VegBIEN>


  		




  274
  
  
    
Inserted 29 new rows into database


  		




  
  261
  
    
Inserted 31 new rows into database


  		












  

    
      inputs/CVS/taxonObservation_/unmapped_terms.csv
    
  





  76
  76
  
    
*usda_code


  		




  77
  77
  
    
*usda_growthForm


  		




  78
  78
  
    
*Subkingdom


  		




  79
  
  
    
*Superdivision


  		




  80
  79
  
    
*Division


  		




  81
  
  
    
*Subdivision


  		




  82
  80
  
    
*Subclass


  		




  
  81
  
    
*composite family


  		




  
  82
  
    
*tribe


  		




  
  83
  
    
*composite genus


  		




  
  84
  
    
subgenus


  		




  
  85
  
    
*section


  		




  
  86
  
    
*composite species


  		




  
  87
  
    
*composite variety


  		












Also available in:  Unified diff