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Name Size Revision Age Author Comment
  _archive 1598 almost 13 years Aaron Marcuse-Kubitza Moved _archive/tapir2flatClient/trunk/client/ t...
  analysis 3076 over 12 years Aaron Marcuse-Kubitza Added top-level analysis dir for range modeling
  backups 6965 about 12 years Aaron Marcuse-Kubitza backups/Makefile: Factored $(isMac) out into li...
  bin 6981 about 12 years Aaron Marcuse-Kubitza make_analytical_db: Automatically call export_a...
  config 6321 about 12 years Aaron Marcuse-Kubitza Added config/bien_read_password
  inputs 6989 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Mapped authorTaxo...
  lib 6978 about 12 years Aaron Marcuse-Kubitza lib/common.Makefile: $(confirm): Added comment ...
  mappings 6989 about 12 years Aaron Marcuse-Kubitza mappings/VegCore-VegBIEN.csv: Mapped authorTaxo...
  schemas 6986 about 12 years Aaron Marcuse-Kubitza schemas/Makefile: %/publish: Fixed bug where co...
  to_do 4524 over 12 years Aaron Marcuse-Kubitza to_do/timeline.doc: Updated to reflect addition...
  validation 5971 about 12 years Aaron Marcuse-Kubitza Updated validation/BIEN2_Analytical_DB_overview...
Makefile 11.4 KB 6916 about 12 years Aaron Marcuse-Kubitza Moved schemas-related commands from root Makefi...
README.TXT 16.2 KB 6987 about 12 years Aaron Marcuse-Kubitza README.TXT: Maintenance: VegCore data dictionar...
map 1001 Bytes 6949 about 12 years Aaron Marcuse-Kubitza vegbien_dest: Changed default $prefix to "", so...
new_terms.csv 30.4 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv
unmapped_terms.csv 5.8 KB 4887 over 12 years Aaron Marcuse-Kubitza Regenerated root unmapped_terms.csv, new_terms.csv

Latest revisions

# Date Author Comment
6989 12/20/2012 01:23 PM Aaron Marcuse-Kubitza

mappings/VegCore-VegBIEN.csv: Mapped authorTaxonCode
6988 12/20/2012 01:12 PM Aaron Marcuse-Kubitza

mappings/VegCore.csv: Regenerated from wiki
6987 12/20/2012 01:12 PM Aaron Marcuse-Kubitza

README.TXT: Maintenance: VegCore data dictionary: Added step to commit updated mappings/VegCore.csv
6986 12/20/2012 12:13 PM Aaron Marcuse-Kubitza

schemas/Makefile: %/publish: Fixed bug where commands were not being run transactionally, because --single-transaction requires `--file -` to work properly
6985 12/20/2012 11:36 AM Aaron Marcuse-Kubitza

input.Makefile: Editing import: Removed rotate because appending the current svn revision doesn't make sense, since this is not related to the revision used to import the datasource
6984 12/20/2012 11:34 AM Aaron Marcuse-Kubitza

input.Makefile: Editing import: Added rename/% and use it in rotate
6983 12/20/2012 11:21 AM Aaron Marcuse-Kubitza

inputs/import.stats.xls: Updated import times
6982 12/20/2012 11:21 AM Aaron Marcuse-Kubitza

schemas/Makefile: Use $* instead of $(@D) for clarity. $(@D) is only needed when the dir part of the target includes a prefix in addition to the % stem.
6981 12/20/2012 10:45 AM Aaron Marcuse-Kubitza

make_analytical_db: Automatically call export_analytical_db when finished
6980 12/20/2012 10:35 AM Aaron Marcuse-Kubitza

schemas/vegbien.sql: make_family_higher_plant_group(): Added `taxonepithet IS NOT NULL` filter, to allow make_analytical_db to proceed even when the NCBI import fails (leaving some nodes with rank = 'family' but no associated taxonepithet). The most recent NCBI import failed due to the search_path/DuplicateException bug resulting from the import schema and public being in the search_path together.

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